RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 SAMD10Q9BYL1 202 aa3.6□□□□□ -1.83
LRIT3-201ENST00000327908 ZNF469Q96JG9 3925 aaPredicted RBP3.59□□□□□ -1.83
LRIT3-201ENST00000327908 Q6ZQT7 251 aa3.59□□□□□ -1.83
LRIT3-201ENST00000327908 BAGE3Q86Y29 109 aa3.59□□□□□ -1.83
LRIT3-201ENST00000327908 TGIF2-C20orf24A0A0A6YYL0 155 aa3.59□□□□□ -1.83
LRIT3-201ENST00000327908 A0A0J9YY99 117 aa3.59□□□□□ -1.83
LRIT3-201ENST00000327908 MIAQ16674 131 aa3.59□□□□□ -1.83
LRIT3-201ENST00000327908 SFTA2Q6UW10 78 aa3.59□□□□□ -1.83
LRIT3-201ENST00000327908 MSRB1Q9NZV6 116 aa3.59□□□□□ -1.83
LRIT3-201ENST00000327908 COLCA2A8K830 154 aa3.59□□□□□ -1.84
LRIT3-201ENST00000327908 HBDP02042 147 aa3.59□□□□□ -1.84
LRIT3-201ENST00000327908 LINC00336Q6ZUF6 198 aa3.59□□□□□ -1.84
LRIT3-201ENST00000327908 IGHV3-73A0A0B4J1V6 119 aa3.58□□□□□ -1.84
LRIT3-201ENST00000327908 LCE6AA0A183 80 aa3.58□□□□□ -1.84
LRIT3-201ENST00000327908 C20orf202A1L168 122 aa3.58□□□□□ -1.84
LRIT3-201ENST00000327908 HSBP1O75506 76 aa3.58□□□□□ -1.84
LRIT3-201ENST00000327908 ESDP10768 282 aa3.58□□□□□ -1.84
LRIT3-201ENST00000327908 SS18Q15532 418 aa3.58□□□□□ -1.84
LRIT3-201ENST00000327908 C20orf203Q8NBC4 194 aa3.58□□□□□ -1.84
LRIT3-201ENST00000327908 CSMD2Q7Z408 3487 aa3.58□□□□□ -1.84
LRIT3-201ENST00000327908 IGHV3-38A0A0C4DH36 116 aa3.58□□□□□ -1.84
LRIT3-201ENST00000327908 NPYP01303 97 aa3.58□□□□□ -1.84
LRIT3-201ENST00000327908 LINC00614P0C842 121 aa3.58□□□□□ -1.84
LRIT3-201ENST00000327908 PRB4P10163 310 aaPredicted RBP3.58□□□□□ -1.84
LRIT3-201ENST00000327908 CBLN2Q8IUK8 224 aa3.58□□□□□ -1.84
LRIT3-201ENST00000327908 LINC00476Q8WZB0 136 aa3.58□□□□□ -1.84
LRIT3-201ENST00000327908 JPT2Q9H910 190 aa3.58□□□□□ -1.84
LRIT3-201ENST00000327908 APOMO95445 188 aa3.58□□□□□ -1.84
LRIT3-201ENST00000327908 S100A6P06703 90 aa3.58□□□□□ -1.84
LRIT3-201ENST00000327908 COA6Q5JTJ3 125 aaKnown RBP3.58□□□□□ -1.84
LRIT3-201ENST00000327908 ZFAND6Q6FIF0 208 aa3.58□□□□□ -1.84
LRIT3-201ENST00000327908 MUC21A0A0G2JKD1 596 aa3.57□□□□□ -1.84
LRIT3-201ENST00000327908 MUC21A0A140T8X8 626 aa3.57□□□□□ -1.84
LRIT3-201ENST00000327908 TSHBP01222 138 aa3.57□□□□□ -1.84
LRIT3-201ENST00000327908 NIT1Q86X76 327 aa3.57□□□□□ -1.84
LRIT3-201ENST00000327908 NOTCH3Q9UM47 2321 aa3.57□□□□□ -1.84
LRIT3-201ENST00000327908 IBA57-AS1B1ANH7 110 aa3.57□□□□□ -1.84
LRIT3-201ENST00000327908 SNRPEP62304 92 aaKnown RBP3.57□□□□□ -1.84
LRIT3-201ENST00000327908 ERASQ7Z444 233 aa3.57□□□□□ -1.84
LRIT3-201ENST00000327908 C18orf32Q8TCD1 76 aa3.57□□□□□ -1.84
LRIT3-201ENST00000327908 TOMM6Q96B49 74 aa3.57□□□□□ -1.84
LRIT3-201ENST00000327908 TMEM262E9PQX1 116 aa3.57□□□□□ -1.84
LRIT3-201ENST00000327908 PRM2P04554 102 aa3.57□□□□□ -1.84
LRIT3-201ENST00000327908 ATRAIDQ6UW56 229 aa3.57□□□□□ -1.84
LRIT3-201ENST00000327908 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.56□□□□□ -1.84
LRIT3-201ENST00000327908 H3BRM9 83 aa3.56□□□□□ -1.84
LRIT3-201ENST00000327908 ESRGQ1W209 222 aa3.56□□□□□ -1.84
LRIT3-201ENST00000327908 TEX43Q6ZNM6 134 aa3.56□□□□□ -1.84
LRIT3-201ENST00000327908 RPL39LQ96EH5 51 aaKnown RBP3.56□□□□□ -1.84
LRIT3-201ENST00000327908 C1orf43Q9BWL3 253 aa3.56□□□□□ -1.84
LRIT3-201ENST00000327908 Q9H8V8 135 aa3.56□□□□□ -1.84
LRIT3-201ENST00000327908 NBDYA0A0U1RRE5 68 aa3.56□□□□□ -1.84
LRIT3-201ENST00000327908 FGF6P10767 208 aa3.56□□□□□ -1.84
LRIT3-201ENST00000327908 RNASEKQ6P5S7 137 aaKnown RBP3.56□□□□□ -1.84
LRIT3-201ENST00000327908 SCGB3A1Q96QR1 104 aa3.56□□□□□ -1.84
LRIT3-201ENST00000327908 LINC00588Q9Y4M8 146 aa3.56□□□□□ -1.84
LRIT3-201ENST00000327908 IGLV2-18A0A075B6J9 118 aa3.56□□□□□ -1.84
LRIT3-201ENST00000327908 TRAV12-1A0A0B4J245 112 aa3.56□□□□□ -1.84
LRIT3-201ENST00000327908 S100A2P29034 98 aa3.56□□□□□ -1.84
LRIT3-201ENST00000327908 Q6ZSN1 163 aa3.56□□□□□ -1.84
LRIT3-201ENST00000327908 VCX2Q9H322 139 aa3.56□□□□□ -1.84
LRIT3-201ENST00000327908 TRGC2P03986 189 aa3.55□□□□□ -1.84
LRIT3-201ENST00000327908 HERVK_113P63121 156 aa3.55□□□□□ -1.84
LRIT3-201ENST00000327908 C2orf66Q6UXQ4 117 aa3.55□□□□□ -1.84
LRIT3-201ENST00000327908 ZNF664Q8N3J9 261 aa3.55□□□□□ -1.84
LRIT3-201ENST00000327908 NTN5Q8WTR8 489 aaPredicted RBP3.55□□□□□ -1.84
LRIT3-201ENST00000327908 MUC4Q99102 2169 aa3.55□□□□□ -1.84
LRIT3-201ENST00000327908 MGAM2Q2M2H8 2515 aa3.55□□□□□ -1.84
LRIT3-201ENST00000327908 HERVK_113P61574 105 aa3.55□□□□□ -1.84
LRIT3-201ENST00000327908 FAM19A3Q7Z5A8 133 aa3.55□□□□□ -1.84
LRIT3-201ENST00000327908 TRAV26-2A0A0B4J265 109 aa3.55□□□□□ -1.84
LRIT3-201ENST00000327908 CXCL5P42830 114 aa3.55□□□□□ -1.84
LRIT3-201ENST00000327908 RBX1P62877 108 aa3.55□□□□□ -1.84
LRIT3-201ENST00000327908 PMVKQ15126 192 aa3.55□□□□□ -1.84
LRIT3-201ENST00000327908 C1orf134Q5TEV5 83 aa3.55□□□□□ -1.84
LRIT3-201ENST00000327908 C6orf223Q8N319 242 aa3.55□□□□□ -1.84
LRIT3-201ENST00000327908 MAP1LC3CQ9BXW4 147 aa3.55□□□□□ -1.84
LRIT3-201ENST00000327908 LOC100131303A0A0U1RQF7 123 aa3.54□□□□□ -1.84
LRIT3-201ENST00000327908 LINC00587B1AMM8 73 aa3.54□□□□□ -1.84
LRIT3-201ENST00000327908 SMKR1H3BMG3 65 aa3.54□□□□□ -1.84
LRIT3-201ENST00000327908 LY6G6CO95867 125 aa3.54□□□□□ -1.84
LRIT3-201ENST00000327908 ANGP03950 147 aaKnown RBP3.54□□□□□ -1.84
LRIT3-201ENST00000327908 GAGE6Q13070 117 aa3.54□□□□□ -1.84
LRIT3-201ENST00000327908 PDZD11Q5EBL8 140 aa3.54□□□□□ -1.84
LRIT3-201ENST00000327908 PRR34Q9NV39 138 aa3.54□□□□□ -1.84
LRIT3-201ENST00000327908 TENM1Q9UKZ4 2725 aa3.54□□□□□ -1.84
LRIT3-201ENST00000327908 LOC389332A0A1B0GUA5 103 aa3.54□□□□□ -1.84
LRIT3-201ENST00000327908 CDPF1Q6NVV7 123 aa3.54□□□□□ -1.84
LRIT3-201ENST00000327908 PET117Q6UWS5 81 aa3.54□□□□□ -1.84
LRIT3-201ENST00000327908 Q8N976 141 aa3.54□□□□□ -1.84
LRIT3-201ENST00000327908 UBE2D4Q9Y2X8 147 aa3.54□□□□□ -1.84
LRIT3-201ENST00000327908 CSMD1Q96PZ7 3565 aa3.54□□□□□ -1.84
LRIT3-201ENST00000327908 IGHV1-58A0A0C4DH39 117 aa3.54□□□□□ -1.84
LRIT3-201ENST00000327908 IFITM10A6NMD0 228 aa3.54□□□□□ -1.84
LRIT3-201ENST00000327908 LEPROTL1O95214 131 aa3.54□□□□□ -1.84
LRIT3-201ENST00000327908 ODF1Q14990 250 aa3.54□□□□□ -1.84
LRIT3-201ENST00000327908 KIAA1644Q3SXP7 199 aa3.54□□□□□ -1.84
LRIT3-201ENST00000327908 PSCAO43653 123 aa3.53□□□□□ -1.84
LRIT3-201ENST00000327908 PLNP26678 52 aa3.53□□□□□ -1.84
LRIT3-201ENST00000327908 IFI27L1Q96BM0 104 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms