RNA–Protein interactions for RNA: ENST00000325167.9

CHMP6-201, Transcript of charged multivesicular body protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP6, Length 1,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-201ENST00000325167 P0DMU3 169 aa13.9□□□□□ -0.18
CHMP6-201ENST00000325167 FAM231AP0DMU4 169 aa13.9□□□□□ -0.18
CHMP6-201ENST00000325167 FAM231CP0DMU5 169 aa13.9□□□□□ -0.18
CHMP6-201ENST00000325167 HERVK_113P61574 105 aa13.9□□□□□ -0.18
CHMP6-201ENST00000325167 WFDC10AQ9H1F0 79 aa13.9□□□□□ -0.18
CHMP6-201ENST00000325167 OVOL2Q9BRP0 275 aa13.89□□□□□ -0.19
CHMP6-201ENST00000325167 TP73-AS1Q9UF72 201 aa13.89□□□□□ -0.19
CHMP6-201ENST00000325167 OR11H2Q8NH07 326 aa13.88□□□□□ -0.19
CHMP6-201ENST00000325167 IGKV2D-26A0A0A0MRZ7 120 aa13.88□□□□□ -0.19
CHMP6-201ENST00000325167 E9PLD3 99 aa13.88□□□□□ -0.19
CHMP6-201ENST00000325167 COTL1Q14019 142 aa13.88□□□□□ -0.19
CHMP6-201ENST00000325167 Q6ZSN1 163 aa13.88□□□□□ -0.19
CHMP6-201ENST00000325167 TENM1Q9UKZ4 2725 aa13.88□□□□□ -0.19
CHMP6-201ENST00000325167 SPANXA1Q9NS26 97 aa13.87□□□□□ -0.19
CHMP6-201ENST00000325167 TCTAP57738 103 aa13.86□□□□□ -0.19
CHMP6-201ENST00000325167 NOP10Q9NPE3 64 aaKnown RBP13.86□□□□□ -0.19
CHMP6-201ENST00000325167 IGLV4-69A0A075B6H9 119 aa13.85□□□□□ -0.19
CHMP6-201ENST00000325167 K7EQD1 137 aa13.85□□□□□ -0.19
CHMP6-201ENST00000325167 RPL36AP83881 106 aaKnown RBP13.85□□□□□ -0.19
CHMP6-201ENST00000325167 Q6ZTI0 123 aa13.85□□□□□ -0.19
CHMP6-201ENST00000325167 RPL36ALQ969Q0 106 aaKnown RBP13.85□□□□□ -0.19
CHMP6-201ENST00000325167 VCX2Q9H322 139 aa13.85□□□□□ -0.19
CHMP6-201ENST00000325167 C11orf86A6NJI1 115 aa13.85□□□□□ -0.19
CHMP6-201ENST00000325167 NFE4Q86UQ8 179 aa13.85□□□□□ -0.19
CHMP6-201ENST00000325167 ORAOV1Q8WV07 137 aa13.85□□□□□ -0.19
CHMP6-201ENST00000325167 ZMAT5Q9UDW3 170 aaKnown RBP13.85□□□□□ -0.19
CHMP6-201ENST00000325167 TRBV7-3A0A075B6L6 115 aa13.84□□□□□ -0.19
CHMP6-201ENST00000325167 A6NDN8 102 aa13.84□□□□□ -0.19
CHMP6-201ENST00000325167 SMIM9A6NGZ8 99 aa13.84□□□□□ -0.19
CHMP6-201ENST00000325167 IGLV4-3A0A075B6K6 122 aa13.83□□□□□ -0.2
CHMP6-201ENST00000325167 TRAV8-6A0A0B4J262 113 aa13.83□□□□□ -0.2
CHMP6-201ENST00000325167 PLAC8L1A1L4L8 177 aa13.83□□□□□ -0.2
CHMP6-201ENST00000325167 SMAGPQ0VAQ4 97 aa13.83□□□□□ -0.2
CHMP6-201ENST00000325167 GAGE1Q13065 139 aa13.83□□□□□ -0.2
CHMP6-201ENST00000325167 TAL2Q16559 108 aa13.83□□□□□ -0.2
CHMP6-201ENST00000325167 DAZ4Q86SG3 579 aaKnown RBP13.83□□□□□ -0.2
CHMP6-201ENST00000325167 DEFB104AQ8WTQ1 72 aa13.83□□□□□ -0.2
CHMP6-201ENST00000325167 ZNF479Q96JC4 524 aa13.83□□□□□ -0.2
CHMP6-201ENST00000325167 DAZ3Q9NR90 486 aaKnown RBP13.83□□□□□ -0.2
CHMP6-201ENST00000325167 NACAE9PAV3 2078 aa13.83□□□□□ -0.2
CHMP6-201ENST00000325167 TRBV25-1A0A075B6N4 114 aa13.82□□□□□ -0.2
CHMP6-201ENST00000325167 TRGV2A0A075B6R0 118 aa13.82□□□□□ -0.2
CHMP6-201ENST00000325167 MYMXA0A1B0GTQ4 84 aa13.82□□□□□ -0.2
CHMP6-201ENST00000325167 ZNF25P17030 456 aaPredicted RBP13.82□□□□□ -0.2
CHMP6-201ENST00000325167 WFDC9Q8NEX5 89 aa13.82□□□□□ -0.2
CHMP6-201ENST00000325167 CHCHD7Q9BUK0 85 aa13.82□□□□□ -0.2
CHMP6-201ENST00000325167 CHAC1Q9BUX1 264 aa13.82□□□□□ -0.2
CHMP6-201ENST00000325167 COX11Q9Y6N1 276 aa13.82□□□□□ -0.2
CHMP6-201ENST00000325167 NBEAL1Q6ZS30 2694 aa13.81□□□□□ -0.2
CHMP6-201ENST00000325167 KIR2DL5BQ8NHK3 375 aa13.81□□□□□ -0.2
CHMP6-201ENST00000325167 PRADC1Q9BSG0 188 aa13.81□□□□□ -0.2
CHMP6-201ENST00000325167 TIMM21Q9BVV7 248 aa13.81□□□□□ -0.2
CHMP6-201ENST00000325167 TRBV6-4A0A1B0GX49 114 aa13.8□□□□□ -0.2
CHMP6-201ENST00000325167 ZNRF2Q8NHG8 242 aa13.8□□□□□ -0.2
CHMP6-201ENST00000325167 AMELXQ99217 191 aa13.8□□□□□ -0.2
CHMP6-201ENST00000325167 GAGE12BA1L429 117 aa13.79□□□□□ -0.2
CHMP6-201ENST00000325167 WIPF1O43516 503 aa13.79□□□□□ -0.2
CHMP6-201ENST00000325167 GAGE7O76087 117 aa13.79□□□□□ -0.2
CHMP6-201ENST00000325167 GAGE12FP0CL80 117 aa13.79□□□□□ -0.2
CHMP6-201ENST00000325167 GAGE12GP0CL81 117 aa13.79□□□□□ -0.2
CHMP6-201ENST00000325167 GAGE12IP0CL82 117 aa13.79□□□□□ -0.2
CHMP6-201ENST00000325167 APOC4P55056 127 aa13.79□□□□□ -0.2
CHMP6-201ENST00000325167 TMEM170BQ5T4T1 132 aa13.79□□□□□ -0.2
CHMP6-201ENST00000325167 LINC00469Q8N7U9 141 aa13.79□□□□□ -0.2
CHMP6-201ENST00000325167 UBE2D4Q9Y2X8 147 aa13.79□□□□□ -0.2
CHMP6-201ENST00000325167 MRPS36P82909 103 aaKnown RBP13.78□□□□□ -0.2
CHMP6-201ENST00000325167 UBE2D3P61077 147 aa13.77□□□□□ -0.21
CHMP6-201ENST00000325167 UBE2D2P62837 147 aa13.77□□□□□ -0.21
CHMP6-201ENST00000325167 MAPKAPK5-AS1Q8N8E1 139 aa13.77□□□□□ -0.21
CHMP6-201ENST00000325167 SLC25A29Q8N8R3 303 aa13.77□□□□□ -0.21
CHMP6-201ENST00000325167 PHLDA1Q8WV24 401 aaPredicted RBP13.77□□□□□ -0.21
CHMP6-201ENST00000325167 TTTY13Q9BZ97 58 aa13.77□□□□□ -0.21
CHMP6-201ENST00000325167 Q9UF83 564 aa13.76□□□□□ -0.21
CHMP6-201ENST00000325167 TAX1BP3O14907 124 aa13.75□□□□□ -0.21
CHMP6-201ENST00000325167 C3orf56Q8N813 242 aa13.75□□□□□ -0.21
CHMP6-201ENST00000325167 OPRPNQ99935 248 aaPredicted RBP13.75□□□□□ -0.21
CHMP6-201ENST00000325167 GTSF1LQ9H1H1 148 aa13.75□□□□□ -0.21
CHMP6-201ENST00000325167 TRGV4A0A0C4DH28 118 aa13.75□□□□□ -0.21
CHMP6-201ENST00000325167 IGHV3-38A0A0C4DH36 116 aa13.75□□□□□ -0.21
CHMP6-201ENST00000325167 ZNF815PA8K554 130 aa13.75□□□□□ -0.21
CHMP6-201ENST00000325167 H3BRM9 83 aa13.75□□□□□ -0.21
CHMP6-201ENST00000325167 TM2D2Q9BX73 214 aa13.75□□□□□ -0.21
CHMP6-201ENST00000325167 EMP1P54849 157 aa13.74□□□□□ -0.21
CHMP6-201ENST00000325167 DGAT2L7PQ6IED9 249 aa13.74□□□□□ -0.21
CHMP6-201ENST00000325167 LINC00612Q8N6U2 182 aa13.74□□□□□ -0.21
CHMP6-201ENST00000325167 CSDC2Q9Y534 153 aaKnown RBP13.74□□□□□ -0.21
CHMP6-201ENST00000325167 CEND1Q8N111 149 aa13.73□□□□□ -0.21
CHMP6-201ENST00000325167 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.72□□□□□ -0.21
CHMP6-201ENST00000325167 TMEM223A0PJW6 202 aa13.72□□□□□ -0.21
CHMP6-201ENST00000325167 IGKV2-29A2NJV5 120 aaPredicted RBP13.72□□□□□ -0.21
CHMP6-201ENST00000325167 GCSHP23434 173 aa13.72□□□□□ -0.21
CHMP6-201ENST00000325167 PLEKHB2Q96CS7 222 aa13.72□□□□□ -0.21
CHMP6-201ENST00000325167 TINCRA0A1B0GVN0 87 aa13.72□□□□□ -0.21
CHMP6-201ENST00000325167 GAGE12JA6NER3 117 aa13.72□□□□□ -0.21
CHMP6-201ENST00000325167 H7C423 109 aa13.72□□□□□ -0.21
CHMP6-201ENST00000325167 LEPROTO15243 131 aa13.72□□□□□ -0.21
CHMP6-201ENST00000325167 ZNF22P17026 224 aaPredicted RBP13.72□□□□□ -0.21
CHMP6-201ENST00000325167 GAGE4Q13068 117 aa13.72□□□□□ -0.21
CHMP6-201ENST00000325167 GAGE5Q13069 117 aa13.72□□□□□ -0.21
CHMP6-201ENST00000325167 GAGE13Q4V321 117 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms