RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 FAM19A2Q8N3H0 131 aa12.69□□□□□ -0.38
SYNE4-201ENST00000324444 STARD9Q9P2P6 4700 aa12.68□□□□□ -0.38
SYNE4-201ENST00000324444 H3BNG1 76 aa12.68□□□□□ -0.38
SYNE4-201ENST00000324444 UBE2D3P61077 147 aa12.68□□□□□ -0.38
SYNE4-201ENST00000324444 UBE2D2P62837 147 aa12.68□□□□□ -0.38
SYNE4-201ENST00000324444 DYNC2H1Q8NCM8 4307 aaKnown RBP12.67□□□□□ -0.38
SYNE4-201ENST00000324444 GAGE12JA6NER3 117 aa12.67□□□□□ -0.38
SYNE4-201ENST00000324444 SMAGPQ0VAQ4 97 aa12.67□□□□□ -0.38
SYNE4-201ENST00000324444 GAGE1Q13065 139 aa12.67□□□□□ -0.38
SYNE4-201ENST00000324444 GAGE4Q13068 117 aa12.67□□□□□ -0.38
SYNE4-201ENST00000324444 GAGE5Q13069 117 aa12.67□□□□□ -0.38
SYNE4-201ENST00000324444 GAGE13Q4V321 117 aa12.67□□□□□ -0.38
SYNE4-201ENST00000324444 CSMD3Q7Z407 3707 aa12.66□□□□□ -0.38
SYNE4-201ENST00000324444 ATP5LO75964 103 aa12.66□□□□□ -0.38
SYNE4-201ENST00000324444 BTF3P20290 206 aaKnown RBP12.66□□□□□ -0.38
SYNE4-201ENST00000324444 AKR1D1P51857 326 aa12.66□□□□□ -0.38
SYNE4-201ENST00000324444 GTSF1LQ9H1H1 148 aa12.66□□□□□ -0.38
SYNE4-201ENST00000324444 CYSLTR1Q9Y271 337 aa12.66□□□□□ -0.38
SYNE4-201ENST00000324444 IFITM10A6NMD0 228 aa12.65□□□□□ -0.38
SYNE4-201ENST00000324444 TSHBP01222 138 aa12.65□□□□□ -0.38
SYNE4-201ENST00000324444 GYPEP15421 78 aa12.65□□□□□ -0.38
SYNE4-201ENST00000324444 HTN3P15516 51 aa12.65□□□□□ -0.38
SYNE4-201ENST00000324444 OR10D4PQ8NGN7 298 aa12.65□□□□□ -0.38
SYNE4-201ENST00000324444 TRAV26-1A0A087WT03 109 aa12.64□□□□□ -0.39
SYNE4-201ENST00000324444 PMCHL1Q16048 86 aa12.64□□□□□ -0.39
SYNE4-201ENST00000324444 MRPL23Q16540 153 aaKnown RBP12.64□□□□□ -0.39
SYNE4-201ENST00000324444 TOMM6Q96B49 74 aa12.64□□□□□ -0.39
SYNE4-201ENST00000324444 MAP1LC3CQ9BXW4 147 aa12.64□□□□□ -0.39
SYNE4-201ENST00000324444 TRAV10A0A0B4J240 114 aa12.63□□□□□ -0.39
SYNE4-201ENST00000324444 C2orf66Q6UXQ4 117 aa12.63□□□□□ -0.39
SYNE4-201ENST00000324444 NEGR1Q7Z3B1 354 aa12.63□□□□□ -0.39
SYNE4-201ENST00000324444 ATP6V0E2Q8NHE4 81 aa12.63□□□□□ -0.39
SYNE4-201ENST00000324444 ICOSQ9Y6W8 199 aa12.63□□□□□ -0.39
SYNE4-201ENST00000324444 RYR2Q92736 4967 aa12.63□□□□□ -0.39
SYNE4-201ENST00000324444 SACSQ9NZJ4 4579 aa12.62□□□□□ -0.39
SYNE4-201ENST00000324444 LINC00694P0DN24 101 aa12.62□□□□□ -0.39
SYNE4-201ENST00000324444 Q6ZTC4 211 aa12.62□□□□□ -0.39
SYNE4-201ENST00000324444 PHLDA1Q8WV24 401 aaPredicted RBP12.62□□□□□ -0.39
SYNE4-201ENST00000324444 A0A096LNJ9 63 aa12.61□□□□□ -0.39
SYNE4-201ENST00000324444 NPSP0C0P6 89 aa12.61□□□□□ -0.39
SYNE4-201ENST00000324444 C20orf203Q8NBC4 194 aa12.61□□□□□ -0.39
SYNE4-201ENST00000324444 Q9UF83 564 aa12.61□□□□□ -0.39
SYNE4-201ENST00000324444 DEFB131BA0A096LNP1 70 aa12.6□□□□□ -0.39
SYNE4-201ENST00000324444 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.6□□□□□ -0.39
SYNE4-201ENST00000324444 H7C423 109 aa12.6□□□□□ -0.39
SYNE4-201ENST00000324444 NANOS2P60321 138 aaKnown RBP12.6□□□□□ -0.39
SYNE4-201ENST00000324444 PAPPA-AS1Q5QFB9 102 aa12.6□□□□□ -0.39
SYNE4-201ENST00000324444 ERASQ7Z444 233 aa12.6□□□□□ -0.39
SYNE4-201ENST00000324444 TMEM141Q96I45 108 aa12.6□□□□□ -0.39
SYNE4-201ENST00000324444 VSIG2Q96IQ7 327 aa12.6□□□□□ -0.39
SYNE4-201ENST00000324444 SCGB3A1Q96QR1 104 aa12.6□□□□□ -0.39
SYNE4-201ENST00000324444 TRBV25-1A0A075B6N4 114 aa12.59□□□□□ -0.39
SYNE4-201ENST00000324444 IGHV3-38A0A0C4DH36 116 aa12.59□□□□□ -0.39
SYNE4-201ENST00000324444 LOC100131303A0A0U1RQF7 123 aa12.59□□□□□ -0.39
SYNE4-201ENST00000324444 C20orf202A1L168 122 aa12.59□□□□□ -0.39
SYNE4-201ENST00000324444 IFI27L1Q96BM0 104 aa12.59□□□□□ -0.39
SYNE4-201ENST00000324444 A0A0J9YY99 117 aa12.58□□□□□ -0.4
SYNE4-201ENST00000324444 LCE6AA0A183 80 aa12.58□□□□□ -0.4
SYNE4-201ENST00000324444 KRTDAPP60985 99 aa12.58□□□□□ -0.4
SYNE4-201ENST00000324444 PET117Q6UWS5 81 aa12.58□□□□□ -0.4
SYNE4-201ENST00000324444 TIMM17AQ99595 171 aa12.58□□□□□ -0.4
SYNE4-201ENST00000324444 Q6ZN92 141 aa12.57□□□□□ -0.4
SYNE4-201ENST00000324444 SPATA12Q7Z6I5 190 aa12.57□□□□□ -0.4
SYNE4-201ENST00000324444 TMEM243Q9BU79 118 aa12.57□□□□□ -0.4
SYNE4-201ENST00000324444 SPANXA1Q9NS26 97 aa12.57□□□□□ -0.4
SYNE4-201ENST00000324444 PYGO1Q9Y3Y4 419 aa12.57□□□□□ -0.4
SYNE4-201ENST00000324444 LYSTQ99698 3801 aa12.57□□□□□ -0.4
SYNE4-201ENST00000324444 TRBV6-8A0A0A6YYG3 113 aa12.56□□□□□ -0.4
SYNE4-201ENST00000324444 UBE2L6O14933 153 aa12.56□□□□□ -0.4
SYNE4-201ENST00000324444 PKIAP61925 76 aa12.56□□□□□ -0.4
SYNE4-201ENST00000324444 TIMM21Q9BVV7 248 aa12.56□□□□□ -0.4
SYNE4-201ENST00000324444 SYS1-DBNDD2H3BUS1 97 aa12.56□□□□□ -0.4
SYNE4-201ENST00000324444 C3orf79P0CE67 100 aa12.56□□□□□ -0.4
SYNE4-201ENST00000324444 TIRAPP58753 221 aa12.56□□□□□ -0.4
SYNE4-201ENST00000324444 JOSD1Q15040 202 aaPredicted RBP12.56□□□□□ -0.4
SYNE4-201ENST00000324444 C15orf53Q8NAA6 179 aa12.56□□□□□ -0.4
SYNE4-201ENST00000324444 CHCHD7Q9BUK0 85 aa12.56□□□□□ -0.4
SYNE4-201ENST00000324444 PRSS1P07477 247 aa12.55□□□□□ -0.4
SYNE4-201ENST00000324444 SMIM6P0DI80 62 aa12.55□□□□□ -0.4
SYNE4-201ENST00000324444 DGAT2L7PQ6IED9 249 aa12.54□□□□□ -0.4
SYNE4-201ENST00000324444 IGIPA6NJ69 53 aa12.53□□□□□ -0.4
SYNE4-201ENST00000324444 SCGB1D1O95968 90 aa12.53□□□□□ -0.4
SYNE4-201ENST00000324444 ZNF25P17030 456 aaPredicted RBP12.53□□□□□ -0.4
SYNE4-201ENST00000324444 NTM-AS1Q6ZSK4 140 aa12.53□□□□□ -0.4
SYNE4-201ENST00000324444 TMEM101Q96IK0 257 aa12.53□□□□□ -0.4
SYNE4-201ENST00000324444 CSDC2Q9Y534 153 aaKnown RBP12.53□□□□□ -0.4
SYNE4-201ENST00000324444 A0A096LPF7 62 aa12.52□□□□□ -0.41
SYNE4-201ENST00000324444 TRAV12-1A0A0B4J245 112 aa12.52□□□□□ -0.41
SYNE4-201ENST00000324444 RPL39P62891 51 aaKnown RBP12.52□□□□□ -0.41
SYNE4-201ENST00000324444 AMMECR1LQ6DCA0 310 aa12.52□□□□□ -0.41
SYNE4-201ENST00000324444 MRPL52Q86TS9 123 aaKnown RBP12.52□□□□□ -0.41
SYNE4-201ENST00000324444 LGALS9CQ6DKI2 356 aa12.51□□□□□ -0.41
SYNE4-201ENST00000324444 LINC00173Q6ZV60 143 aa12.51□□□□□ -0.41
SYNE4-201ENST00000324444 DEFB104AQ8WTQ1 72 aa12.51□□□□□ -0.41
SYNE4-201ENST00000324444 MRPS36P82909 103 aaKnown RBP12.5□□□□□ -0.41
SYNE4-201ENST00000324444 LELP1Q5T871 98 aa12.5□□□□□ -0.41
SYNE4-201ENST00000324444 CHCHD5Q9BSY4 110 aa12.5□□□□□ -0.41
SYNE4-201ENST00000324444 UBE2D4Q9Y2X8 147 aa12.5□□□□□ -0.41
SYNE4-201ENST00000324444 DNAH1Q9P2D7 4330 aa12.49□□□□□ -0.41
SYNE4-201ENST00000324444 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 140.9 ms