RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 C9JAW5 83 aa14.59□□□□□ -0.07
CRLF3-201ENST00000324238 XGP55808 180 aa14.59□□□□□ -0.07
CRLF3-201ENST00000324238 ANKRD29Q8N6D5 301 aa14.59□□□□□ -0.07
CRLF3-201ENST00000324238 RHODO00212 210 aa14.58□□□□□ -0.07
CRLF3-201ENST00000324238 Q6ZSN1 163 aa14.58□□□□□ -0.07
CRLF3-201ENST00000324238 HOXD3P31249 432 aaPredicted RBP14.58□□□□□ -0.08
CRLF3-201ENST00000324238 SLURP1P55000 103 aa14.58□□□□□ -0.08
CRLF3-201ENST00000324238 FLNAP21333 2647 aaKnown RBP14.58□□□□□ -0.08
CRLF3-201ENST00000324238 TRBV6-5A0A0K0K1A5 114 aa14.58□□□□□ -0.08
CRLF3-201ENST00000324238 SPINK8P0C7L1 97 aa14.58□□□□□ -0.08
CRLF3-201ENST00000324238 RPL32P62910 135 aaKnown RBP14.58□□□□□ -0.08
CRLF3-201ENST00000324238 I3L3M4 83 aa14.57□□□□□ -0.08
CRLF3-201ENST00000324238 CD28P10747 220 aa14.57□□□□□ -0.08
CRLF3-201ENST00000324238 DEFB131AP59861 70 aa14.57□□□□□ -0.08
CRLF3-201ENST00000324238 AKAP9Q99996 3911 aa14.56□□□□□ -0.08
CRLF3-201ENST00000324238 Q5PR19 223 aa14.56□□□□□ -0.08
CRLF3-201ENST00000324238 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.56□□□□□ -0.08
CRLF3-201ENST00000324238 IGKV2-29A2NJV5 120 aaPredicted RBP14.56□□□□□ -0.08
CRLF3-201ENST00000324238 BRI3O95415 125 aa14.56□□□□□ -0.08
CRLF3-201ENST00000324238 CKS1BP61024 79 aa14.56□□□□□ -0.08
CRLF3-201ENST00000324238 ITPR3Q14573 2671 aa14.56□□□□□ -0.08
CRLF3-201ENST00000324238 A8MWV9 139 aa14.55□□□□□ -0.08
CRLF3-201ENST00000324238 TCTEX1D4Q5JR98 221 aa14.55□□□□□ -0.08
CRLF3-201ENST00000324238 NOTCH2Q04721 2471 aa14.55□□□□□ -0.08
CRLF3-201ENST00000324238 DAND5Q8N907 189 aa14.55□□□□□ -0.08
CRLF3-201ENST00000324238 LINC01356Q8N9X3 169 aa14.55□□□□□ -0.08
CRLF3-201ENST00000324238 LEPROTO15243 131 aa14.55□□□□□ -0.08
CRLF3-201ENST00000324238 IGHV3-30-3P0DP02 117 aa14.54□□□□□ -0.08
CRLF3-201ENST00000324238 NSUN5P1Q3KNT7 163 aa14.54□□□□□ -0.08
CRLF3-201ENST00000324238 TEN1Q86WV5 123 aa14.54□□□□□ -0.08
CRLF3-201ENST00000324238 FAM104AQ969W3 186 aa14.54□□□□□ -0.08
CRLF3-201ENST00000324238 IGHV3-33P01772 117 aa14.54□□□□□ -0.08
CRLF3-201ENST00000324238 ADAMTSL4-AS1Q5T5F5 129 aa14.53□□□□□ -0.08
CRLF3-201ENST00000324238 ERG28Q9UKR5 140 aa14.53□□□□□ -0.08
CRLF3-201ENST00000324238 A0A0J9YXY3 114 aa14.53□□□□□ -0.08
CRLF3-201ENST00000324238 TMEM263Q8WUH6 116 aaKnown RBP14.52□□□□□ -0.08
CRLF3-201ENST00000324238 A0A0U1RRA0 63 aa14.52□□□□□ -0.09
CRLF3-201ENST00000324238 SLC25A20O43772 301 aa14.52□□□□□ -0.09
CRLF3-201ENST00000324238 PPDPFLQ8WWR9 84 aa14.52□□□□□ -0.09
CRLF3-201ENST00000324238 BBC3Q96PG8 261 aaPredicted RBP14.52□□□□□ -0.09
CRLF3-201ENST00000324238 RBMY1BA6NDE4 496 aaKnown RBP14.52□□□□□ -0.09
CRLF3-201ENST00000324238 RBMY1EA6NEQ0 496 aaKnown RBP14.52□□□□□ -0.09
CRLF3-201ENST00000324238 RBMY1DP0C7P1 496 aaKnown RBP14.52□□□□□ -0.09
CRLF3-201ENST00000324238 RHOHQ15669 191 aa14.52□□□□□ -0.09
CRLF3-201ENST00000324238 Q6ZUT4 128 aa14.52□□□□□ -0.09
CRLF3-201ENST00000324238 TIMM21Q9BVV7 248 aa14.5□□□□□ -0.09
CRLF3-201ENST00000324238 TNFRSF18Q9Y5U5 241 aa14.5□□□□□ -0.09
CRLF3-201ENST00000324238 CIDEAO60543 219 aa14.5□□□□□ -0.09
CRLF3-201ENST00000324238 IGHV3OR16-12A0A075B7B8 117 aa14.49□□□□□ -0.09
CRLF3-201ENST00000324238 A0A1W2PRX2 142 aa14.48□□□□□ -0.09
CRLF3-201ENST00000324238 SCGB1A1P11684 91 aa14.48□□□□□ -0.09
CRLF3-201ENST00000324238 LYRM7Q5U5X0 104 aa14.48□□□□□ -0.09
CRLF3-201ENST00000324238 TRBV20-1A0A075B6N2 111 aa14.48□□□□□ -0.09
CRLF3-201ENST00000324238 A0A1B0GV72 72 aa14.48□□□□□ -0.09
CRLF3-201ENST00000324238 NTN5Q8WTR8 489 aaPredicted RBP14.48□□□□□ -0.09
CRLF3-201ENST00000324238 ZNF625Q96I27 306 aaPredicted RBP14.48□□□□□ -0.09
CRLF3-201ENST00000324238 ATP6V0E2Q8NHE4 81 aa14.47□□□□□ -0.09
CRLF3-201ENST00000324238 VPREB3Q9UKI3 123 aa14.47□□□□□ -0.09
CRLF3-201ENST00000324238 CRYBA4P53673 196 aa14.47□□□□□ -0.09
CRLF3-201ENST00000324238 UBR5O95071 2799 aaPredicted RBP14.47□□□□□ -0.09
CRLF3-201ENST00000324238 TMEM61Q8N0U2 210 aa14.46□□□□□ -0.09
CRLF3-201ENST00000324238 FN1P02751 2386 aaKnown RBP14.46□□□□□ -0.09
CRLF3-201ENST00000324238 TRGV11A0A075B6L2 103 aa14.46□□□□□ -0.09
CRLF3-201ENST00000324238 HIST2H2BCQ6DN03 193 aa14.46□□□□□ -0.09
CRLF3-201ENST00000324238 CLUHP3Q96NS8 147 aa14.46□□□□□ -0.09
CRLF3-201ENST00000324238 GEMIN7Q9H840 131 aaKnown RBP14.46□□□□□ -0.09
CRLF3-201ENST00000324238 ZNF702PQ9H963 129 aa14.46□□□□□ -0.09
CRLF3-201ENST00000324238 NDUFA12Q9UI09 145 aa14.46□□□□□ -0.09
CRLF3-201ENST00000324238 TRAV26-1A0A087WT03 109 aa14.46□□□□□ -0.1
CRLF3-201ENST00000324238 M0R2P5 195 aa14.46□□□□□ -0.1
CRLF3-201ENST00000324238 TRIAP1O43715 76 aa14.46□□□□□ -0.1
CRLF3-201ENST00000324238 LINC00467Q9BRT7 94 aa14.46□□□□□ -0.1
CRLF3-201ENST00000324238 TEX49A0A1B0GTD5 131 aa14.45□□□□□ -0.1
CRLF3-201ENST00000324238 LINC01587Q99440 93 aa14.45□□□□□ -0.1
CRLF3-201ENST00000324238 ITPR2Q14571 2701 aa14.45□□□□□ -0.1
CRLF3-201ENST00000324238 ODF3Q96PU9 254 aa14.45□□□□□ -0.1
CRLF3-201ENST00000324238 NDUFA7O95182 113 aa14.44□□□□□ -0.1
CRLF3-201ENST00000324238 SETXQ7Z333 2677 aaKnown RBP14.44□□□□□ -0.1
CRLF3-201ENST00000324238 LITAFQ99732 161 aa14.44□□□□□ -0.1
CRLF3-201ENST00000324238 CLEC2BQ92478 149 aa14.43□□□□□ -0.1
CRLF3-201ENST00000324238 H3BMM0 161 aa14.43□□□□□ -0.1
CRLF3-201ENST00000324238 UBE2E2Q96LR5 201 aa14.43□□□□□ -0.1
CRLF3-201ENST00000324238 A0A096LNT2 108 aa14.42□□□□□ -0.1
CRLF3-201ENST00000324238 GATA3P23771 443 aa14.42□□□□□ -0.1
CRLF3-201ENST00000324238 XCL2Q9UBD3 114 aa14.42□□□□□ -0.1
CRLF3-201ENST00000324238 NBEAL2Q6ZNJ1 2754 aa14.42□□□□□ -0.1
CRLF3-201ENST00000324238 IGHV3-53P01767 116 aa14.42□□□□□ -0.1
CRLF3-201ENST00000324238 IGHV4-31P0DP07 118 aa14.42□□□□□ -0.1
CRLF3-201ENST00000324238 SBSPONQ8IVN8 264 aa14.42□□□□□ -0.1
CRLF3-201ENST00000324238 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.42□□□□□ -0.1
CRLF3-201ENST00000324238 CHCHD7Q9BUK0 85 aa14.42□□□□□ -0.1
CRLF3-201ENST00000324238 CDKN2A-AS1Q9UH64 79 aa14.41□□□□□ -0.1
CRLF3-201ENST00000324238 Q96MF0 132 aa14.41□□□□□ -0.1
CRLF3-201ENST00000324238 MRPS36P82909 103 aaKnown RBP14.4□□□□□ -0.1
CRLF3-201ENST00000324238 LINC01620Q4KN68 170 aa14.4□□□□□ -0.1
CRLF3-201ENST00000324238 Q6YL49 198 aa14.4□□□□□ -0.1
CRLF3-201ENST00000324238 A0A0B4J2C4 111 aa14.39□□□□□ -0.11
CRLF3-201ENST00000324238 IGHV1-58A0A0C4DH39 117 aa14.39□□□□□ -0.11
CRLF3-201ENST00000324238 CRLF1O75462 422 aa14.39□□□□□ -0.11
CRLF3-201ENST00000324238 UBE2D4Q9Y2X8 147 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms