RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 MRGPRG-AS1Q2M3A8 158 aa11.54□□□□□ -0.56
VARS2-201ENST00000321897 PRR9Q5T870 116 aa11.54□□□□□ -0.56
VARS2-201ENST00000321897 PAX4O43316 350 aa11.53□□□□□ -0.56
VARS2-201ENST00000321897 ZNRF2Q8NHG8 242 aa11.53□□□□□ -0.56
VARS2-201ENST00000321897 TOMM6Q96B49 74 aa11.53□□□□□ -0.56
VARS2-201ENST00000321897 C11orf71Q6IPW1 123 aa11.53□□□□□ -0.56
VARS2-201ENST00000321897 ZFAND3Q9H8U3 227 aa11.53□□□□□ -0.56
VARS2-201ENST00000321897 CHD6Q8TD26 2715 aa11.53□□□□□ -0.56
VARS2-201ENST00000321897 RASL10AQ92737 203 aa11.52□□□□□ -0.57
VARS2-201ENST00000321897 ASH1LQ9NR48 2969 aaKnown RBP11.52□□□□□ -0.57
VARS2-201ENST00000321897 TINCRA0A1B0GVN0 87 aa11.52□□□□□ -0.57
VARS2-201ENST00000321897 TRAV12-1A0A0B4J245 112 aa11.51□□□□□ -0.57
VARS2-201ENST00000321897 CRPP02741 224 aa11.51□□□□□ -0.57
VARS2-201ENST00000321897 NFE4Q86UQ8 179 aa11.51□□□□□ -0.57
VARS2-201ENST00000321897 U3KQK5 164 aa11.51□□□□□ -0.57
VARS2-201ENST00000321897 AVPP01185 164 aa11.51□□□□□ -0.57
VARS2-201ENST00000321897 ATP6V0E2Q8NHE4 81 aa11.51□□□□□ -0.57
VARS2-201ENST00000321897 A0A0J9YY99 117 aa11.5□□□□□ -0.57
VARS2-201ENST00000321897 MORN3Q6PF18 240 aaPredicted RBP11.5□□□□□ -0.57
VARS2-201ENST00000321897 COPS9Q8WXC6 57 aa11.5□□□□□ -0.57
VARS2-201ENST00000321897 FSTL3O95633 263 aa11.5□□□□□ -0.57
VARS2-201ENST00000321897 TRBV7-3A0A075B6L6 115 aa11.5□□□□□ -0.57
VARS2-201ENST00000321897 TRBV6-1A0A0K0K1D8 114 aa11.5□□□□□ -0.57
VARS2-201ENST00000321897 I3L3M4 83 aa11.5□□□□□ -0.57
VARS2-201ENST00000321897 ICOSQ9Y6W8 199 aa11.5□□□□□ -0.57
VARS2-201ENST00000321897 FLNAP21333 2647 aaKnown RBP11.5□□□□□ -0.57
VARS2-201ENST00000321897 ATRQ13535 2644 aa11.5□□□□□ -0.57
VARS2-201ENST00000321897 IGKV3D-7A0A0C4DH55 119 aa11.49□□□□□ -0.57
VARS2-201ENST00000321897 ZNF415Q09FC8 603 aa11.49□□□□□ -0.57
VARS2-201ENST00000321897 F8W735 103 aaPredicted RBP11.49□□□□□ -0.57
VARS2-201ENST00000321897 PFN2P35080 140 aa11.49□□□□□ -0.57
VARS2-201ENST00000321897 MUC4Q99102 2169 aa11.49□□□□□ -0.57
VARS2-201ENST00000321897 IGHG2P01859 326 aa11.49□□□□□ -0.57
VARS2-201ENST00000321897 CRIP2P52943 208 aaPredicted RBP11.49□□□□□ -0.57
VARS2-201ENST00000321897 NEXN-AS1Q8NBZ9 246 aa11.48□□□□□ -0.57
VARS2-201ENST00000321897 SRSF2Q01130 221 aaKnown RBP11.48□□□□□ -0.57
VARS2-201ENST00000321897 CLPSL2Q6UWE3 100 aa11.48□□□□□ -0.57
VARS2-201ENST00000321897 C9orf47Q6ZRZ4 202 aa11.48□□□□□ -0.57
VARS2-201ENST00000321897 VPREB3Q9UKI3 123 aa11.48□□□□□ -0.57
VARS2-201ENST00000321897 DSCR9P59020 149 aa11.47□□□□□ -0.57
VARS2-201ENST00000321897 TMEM61Q8N0U2 210 aa11.47□□□□□ -0.57
VARS2-201ENST00000321897 ESM1Q9NQ30 184 aa11.47□□□□□ -0.57
VARS2-201ENST00000321897 LINC01619G3V211 115 aa11.47□□□□□ -0.57
VARS2-201ENST00000321897 Q9H8V8 135 aa11.46□□□□□ -0.57
VARS2-201ENST00000321897 A8MZ25 164 aa11.46□□□□□ -0.57
VARS2-201ENST00000321897 MRPS12O15235 138 aaKnown RBP11.46□□□□□ -0.57
VARS2-201ENST00000321897 INSP01308 110 aa11.46□□□□□ -0.57
VARS2-201ENST00000321897 TRBV10-2A0A0K0K1G8 114 aa11.46□□□□□ -0.58
VARS2-201ENST00000321897 RPL36AP83881 106 aaKnown RBP11.46□□□□□ -0.58
VARS2-201ENST00000321897 NRACQ8N912 160 aa11.46□□□□□ -0.58
VARS2-201ENST00000321897 RPL36ALQ969Q0 106 aaKnown RBP11.46□□□□□ -0.58
VARS2-201ENST00000321897 LEPROTO15243 131 aa11.45□□□□□ -0.58
VARS2-201ENST00000321897 BAALC-AS2P0C853 105 aa11.45□□□□□ -0.58
VARS2-201ENST00000321897 PROK1P58294 105 aa11.45□□□□□ -0.58
VARS2-201ENST00000321897 C18orf65Q6ZTR6 163 aa11.45□□□□□ -0.58
VARS2-201ENST00000321897 ITPR3Q14573 2671 aa11.45□□□□□ -0.58
VARS2-201ENST00000321897 U3KQE9 123 aa11.45□□□□□ -0.58
VARS2-201ENST00000321897 ITPR1Q14643 2758 aa11.44□□□□□ -0.58
VARS2-201ENST00000321897 CLPSL1A2RUU4 121 aa11.44□□□□□ -0.58
VARS2-201ENST00000321897 RPL32P62910 135 aaKnown RBP11.44□□□□□ -0.58
VARS2-201ENST00000321897 ZFAND2AQ8N6M9 145 aa11.44□□□□□ -0.58
VARS2-201ENST00000321897 MRPL53Q96EL3 112 aaKnown RBP11.44□□□□□ -0.58
VARS2-201ENST00000321897 NOP10Q9NPE3 64 aaKnown RBP11.44□□□□□ -0.58
VARS2-201ENST00000321897 Q8N6K4 173 aa11.43□□□□□ -0.58
VARS2-201ENST00000321897 TRIAP1O43715 76 aa11.43□□□□□ -0.58
VARS2-201ENST00000321897 IGHV3-30-3P0DP02 117 aa11.43□□□□□ -0.58
VARS2-201ENST00000321897 SLC25A29Q8N8R3 303 aa11.43□□□□□ -0.58
VARS2-201ENST00000321897 A6NDX4 124 aa11.43□□□□□ -0.58
VARS2-201ENST00000321897 IGHV3-33P01772 117 aa11.43□□□□□ -0.58
VARS2-201ENST00000321897 EBI3Q14213 229 aa11.42□□□□□ -0.58
VARS2-201ENST00000321897 CDIP1Q9H305 208 aa11.42□□□□□ -0.58
VARS2-201ENST00000321897 Q9HAA7 133 aa11.42□□□□□ -0.58
VARS2-201ENST00000321897 IGHG4P01861 327 aa11.41□□□□□ -0.58
VARS2-201ENST00000321897 PIFOQ8TCI5 191 aa11.41□□□□□ -0.58
VARS2-201ENST00000321897 RBMY1BA6NDE4 496 aaKnown RBP11.41□□□□□ -0.58
VARS2-201ENST00000321897 RBMY1EA6NEQ0 496 aaKnown RBP11.41□□□□□ -0.58
VARS2-201ENST00000321897 LGALS9O00182 355 aa11.41□□□□□ -0.58
VARS2-201ENST00000321897 RHODO00212 210 aa11.41□□□□□ -0.58
VARS2-201ENST00000321897 NXPH4O95158 308 aa11.41□□□□□ -0.58
VARS2-201ENST00000321897 RBMY1DP0C7P1 496 aaKnown RBP11.41□□□□□ -0.58
VARS2-201ENST00000321897 RBMY1A1P0DJD3 496 aaKnown RBP11.41□□□□□ -0.58
VARS2-201ENST00000321897 RBMY1CP0DJD4 496 aa11.41□□□□□ -0.58
VARS2-201ENST00000321897 CRLF1O75462 422 aa11.41□□□□□ -0.58
VARS2-201ENST00000321897 CFAP161Q6P656 301 aa11.4□□□□□ -0.58
VARS2-201ENST00000321897 Q6ZSV7 163 aa11.4□□□□□ -0.58
VARS2-201ENST00000321897 DEFB4AO15263 64 aa11.4□□□□□ -0.58
VARS2-201ENST00000321897 TMEM126AQ9H061 195 aa11.4□□□□□ -0.58
VARS2-201ENST00000321897 MGAM2Q2M2H8 2515 aa11.4□□□□□ -0.59
VARS2-201ENST00000321897 TRACP01848 142 aa11.4□□□□□ -0.59
VARS2-201ENST00000321897 ELANEP08246 267 aa11.4□□□□□ -0.59
VARS2-201ENST00000321897 LENEPQ9Y5L5 61 aa11.4□□□□□ -0.59
VARS2-201ENST00000321897 A0A0J9YXY3 114 aa11.39□□□□□ -0.59
VARS2-201ENST00000321897 INAFM2P0DMQ5 153 aa11.39□□□□□ -0.59
VARS2-201ENST00000321897 KRTAP10-9P60411 292 aa11.39□□□□□ -0.59
VARS2-201ENST00000321897 A0A1B0GX51 115 aa11.39□□□□□ -0.59
VARS2-201ENST00000321897 IGHV3-30P01768 117 aa11.39□□□□□ -0.59
VARS2-201ENST00000321897 IGHV3-30-5P0DP03 117 aa11.39□□□□□ -0.59
VARS2-201ENST00000321897 SHISA2Q6UWI4 295 aa11.38□□□□□ -0.59
VARS2-201ENST00000321897 TEP1Q99973 2627 aaKnown RBP11.38□□□□□ -0.59
VARS2-201ENST00000321897 A0A0J9YX75 114 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms