RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 ZFYVE26Q68DK2 2539 aa12.55□□□□□ -0.4
PACS1-201ENST00000320580 TRAV23DV6A0A075B6W5 121 aa12.53□□□□□ -0.4
PACS1-201ENST00000320580 A8MZ25 164 aa12.53□□□□□ -0.4
PACS1-201ENST00000320580 RPL36AP83881 106 aaKnown RBP12.53□□□□□ -0.4
PACS1-201ENST00000320580 RPL36ALQ969Q0 106 aaKnown RBP12.53□□□□□ -0.4
PACS1-201ENST00000320580 SAA4P35542 130 aa12.53□□□□□ -0.4
PACS1-201ENST00000320580 ITLN2Q8WWU7 325 aaPredicted RBP12.53□□□□□ -0.4
PACS1-201ENST00000320580 NOTCH2Q04721 2471 aa12.53□□□□□ -0.4
PACS1-201ENST00000320580 IGLV4-69A0A075B6H9 119 aa12.53□□□□□ -0.4
PACS1-201ENST00000320580 SERP2Q8N6R1 65 aa12.52□□□□□ -0.4
PACS1-201ENST00000320580 FAM223BA6NKX1 122 aa12.52□□□□□ -0.41
PACS1-201ENST00000320580 RPL18AQ02543 176 aaKnown RBP12.52□□□□□ -0.41
PACS1-201ENST00000320580 FAM223AQ8IWN6 122 aa12.52□□□□□ -0.41
PACS1-201ENST00000320580 BRK1Q8WUW1 75 aa12.52□□□□□ -0.41
PACS1-201ENST00000320580 IGHV3-53P01767 116 aa12.52□□□□□ -0.41
PACS1-201ENST00000320580 MALP21145 153 aa12.52□□□□□ -0.41
PACS1-201ENST00000320580 MYO15AQ9UKN7 3530 aa12.51□□□□□ -0.41
PACS1-201ENST00000320580 SBSPONQ8IVN8 264 aa12.51□□□□□ -0.41
PACS1-201ENST00000320580 TMEM61Q8N0U2 210 aa12.51□□□□□ -0.41
PACS1-201ENST00000320580 MED14OSP0DP75 135 aa12.51□□□□□ -0.41
PACS1-201ENST00000320580 IGHG2P01859 326 aa12.51□□□□□ -0.41
PACS1-201ENST00000320580 PRR9Q5T870 116 aa12.5□□□□□ -0.41
PACS1-201ENST00000320580 CELSR3Q9NYQ7 3312 aa12.5□□□□□ -0.41
PACS1-201ENST00000320580 A0A0U1RQV1 116 aa12.5□□□□□ -0.41
PACS1-201ENST00000320580 IGIPA6NJ69 53 aa12.5□□□□□ -0.41
PACS1-201ENST00000320580 NDUFA4O00483 81 aa12.5□□□□□ -0.41
PACS1-201ENST00000320580 COX6B1P14854 86 aa12.5□□□□□ -0.41
PACS1-201ENST00000320580 IGLV4-3A0A075B6K6 122 aa12.49□□□□□ -0.41
PACS1-201ENST00000320580 LECT2O14960 151 aa12.49□□□□□ -0.41
PACS1-201ENST00000320580 TIRAPP58753 221 aa12.49□□□□□ -0.41
PACS1-201ENST00000320580 USP17L23D6RBM5 183 aa12.49□□□□□ -0.41
PACS1-201ENST00000320580 SEM1Q6ZVN7 128 aa12.49□□□□□ -0.41
PACS1-201ENST00000320580 K7ENP7 123 aa12.49□□□□□ -0.41
PACS1-201ENST00000320580 ELANEP08246 267 aa12.48□□□□□ -0.41
PACS1-201ENST00000320580 C6orf226Q5I0X4 101 aa12.48□□□□□ -0.41
PACS1-201ENST00000320580 IGHV4-4A0A075B6R2 117 aa12.48□□□□□ -0.41
PACS1-201ENST00000320580 PRB1P04280 392 aa12.48□□□□□ -0.41
PACS1-201ENST00000320580 PSMB8P28062 276 aa12.48□□□□□ -0.41
PACS1-201ENST00000320580 BRD3OSQ6XYD6 125 aa12.48□□□□□ -0.41
PACS1-201ENST00000320580 TRBV7-7A0A0K0K1E9 115 aa12.47□□□□□ -0.41
PACS1-201ENST00000320580 ZFAND2AQ8N6M9 145 aa12.47□□□□□ -0.41
PACS1-201ENST00000320580 SND1-IT1Q9HBX3 110 aa12.47□□□□□ -0.41
PACS1-201ENST00000320580 FAM236DA0A1B0GTK5 79 aa12.47□□□□□ -0.41
PACS1-201ENST00000320580 FAM236CP0DP71 79 aa12.47□□□□□ -0.41
PACS1-201ENST00000320580 ORMDL1Q9P0S3 153 aa12.47□□□□□ -0.41
PACS1-201ENST00000320580 POLR2KP53803 58 aaKnown RBP12.46□□□□□ -0.41
PACS1-201ENST00000320580 C22orf34Q6ZV56 151 aa12.46□□□□□ -0.41
PACS1-201ENST00000320580 USMG5Q96IX5 58 aa12.46□□□□□ -0.41
PACS1-201ENST00000320580 ZNF580Q9UK33 172 aa12.46□□□□□ -0.41
PACS1-201ENST00000320580 TRGV1A0A0A0MS02 117 aa12.46□□□□□ -0.41
PACS1-201ENST00000320580 TRAV25A0A0B4J276 109 aa12.46□□□□□ -0.41
PACS1-201ENST00000320580 COX8CQ7Z4L0 72 aa12.46□□□□□ -0.41
PACS1-201ENST00000320580 ZNF292O60281 2723 aa12.46□□□□□ -0.42
PACS1-201ENST00000320580 VSIG2Q96IQ7 327 aa12.46□□□□□ -0.42
PACS1-201ENST00000320580 LINC01546A6NGU7 62 aa12.45□□□□□ -0.42
PACS1-201ENST00000320580 CRYGDP07320 174 aa12.45□□□□□ -0.42
PACS1-201ENST00000320580 Q8N9W7 124 aa12.45□□□□□ -0.42
PACS1-201ENST00000320580 WFDC11Q8NEX6 87 aa12.45□□□□□ -0.42
PACS1-201ENST00000320580 TRGV2A0A075B6R0 118 aa12.45□□□□□ -0.42
PACS1-201ENST00000320580 C20orf173Q96LM9 149 aa12.45□□□□□ -0.42
PACS1-201ENST00000320580 CXCL5P42830 114 aa12.45□□□□□ -0.42
PACS1-201ENST00000320580 CDKN2A-AS1Q9UH64 79 aa12.44□□□□□ -0.42
PACS1-201ENST00000320580 A0A087WVE0 104 aa12.44□□□□□ -0.42
PACS1-201ENST00000320580 LINC00308Q8TCZ7 52 aa12.44□□□□□ -0.42
PACS1-201ENST00000320580 TRBV27A0A0K0K1C4 114 aa12.44□□□□□ -0.42
PACS1-201ENST00000320580 H0YGX0 51 aa12.44□□□□□ -0.42
PACS1-201ENST00000320580 PRRC2AP48634 2157 aaKnown RBP12.44□□□□□ -0.42
PACS1-201ENST00000320580 RNASE3P12724 160 aaKnown RBP12.43□□□□□ -0.42
PACS1-201ENST00000320580 ZFAND3Q9H8U3 227 aa12.43□□□□□ -0.42
PACS1-201ENST00000320580 UNQ9165/PRO28630Q6UXU0 137 aa12.43□□□□□ -0.42
PACS1-201ENST00000320580 CCDC140Q96MF4 163 aa12.42□□□□□ -0.42
PACS1-201ENST00000320580 PSMG3-AS1Q96PY0 264 aa12.42□□□□□ -0.42
PACS1-201ENST00000320580 MUC3AQ02505 3323 aa12.42□□□□□ -0.42
PACS1-201ENST00000320580 H3BUX3 64 aa12.41□□□□□ -0.42
PACS1-201ENST00000320580 DEFB131AP59861 70 aa12.41□□□□□ -0.42
PACS1-201ENST00000320580 IGHV4OR15-8A0A075B7B6 117 aa12.41□□□□□ -0.42
PACS1-201ENST00000320580 A0A087WW49 117 aa12.41□□□□□ -0.42
PACS1-201ENST00000320580 HIST2H2BCQ6DN03 193 aa12.41□□□□□ -0.42
PACS1-201ENST00000320580 HIST2H2BDQ6DRA6 164 aa12.41□□□□□ -0.42
PACS1-201ENST00000320580 IGFL3Q6UXB1 125 aa12.41□□□□□ -0.42
PACS1-201ENST00000320580 CSPG4Q6UVK1 2322 aa12.41□□□□□ -0.42
PACS1-201ENST00000320580 MGAQ8IWI9 3026 aa12.41□□□□□ -0.42
PACS1-201ENST00000320580 PTPN13Q12923 2485 aa12.41□□□□□ -0.42
PACS1-201ENST00000320580 ADAMTSL4-AS1Q5T5F5 129 aa12.41□□□□□ -0.42
PACS1-201ENST00000320580 CFAP54Q96N23 3096 aa12.41□□□□□ -0.42
PACS1-201ENST00000320580 MYO18BQ8IUG5 2567 aa12.4□□□□□ -0.42
PACS1-201ENST00000320580 EPG5Q9HCE0 2579 aa12.4□□□□□ -0.42
PACS1-201ENST00000320580 TSHBP01222 138 aa12.4□□□□□ -0.42
PACS1-201ENST00000320580 GPHB5Q86YW7 130 aa12.4□□□□□ -0.42
PACS1-201ENST00000320580 NDUFC2O95298 119 aa12.39□□□□□ -0.43
PACS1-201ENST00000320580 MRGPRG-AS1Q2M3A8 158 aa12.39□□□□□ -0.43
PACS1-201ENST00000320580 POM121L12Q8N7R1 296 aa12.39□□□□□ -0.43
PACS1-201ENST00000320580 M0QY20 66 aa12.39□□□□□ -0.43
PACS1-201ENST00000320580 NCR3O14931 201 aa12.39□□□□□ -0.43
PACS1-201ENST00000320580 PIK3CD-AS1Q5SR53 167 aa12.39□□□□□ -0.43
PACS1-201ENST00000320580 IGF2-ASQ6U949 168 aa12.39□□□□□ -0.43
PACS1-201ENST00000320580 MIR7-3HGQ8N6C7 128 aa12.39□□□□□ -0.43
PACS1-201ENST00000320580 UBE2E2Q96LR5 201 aa12.38□□□□□ -0.43
PACS1-201ENST00000320580 A0A0J9YX75 114 aa12.38□□□□□ -0.43
PACS1-201ENST00000320580 C4orf26Q17RF5 130 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms