RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 TIMM21Q9BVV7 248 aa6.9□□□□□ -1.3
TMEM39A-201ENST00000319172 SNHG12Q9BXW3 62 aa6.9□□□□□ -1.3
TMEM39A-201ENST00000319172 RNASE3P12724 160 aaKnown RBP6.9□□□□□ -1.31
TMEM39A-201ENST00000319172 RHOHQ15669 191 aa6.9□□□□□ -1.31
TMEM39A-201ENST00000319172 ODF3Q96PU9 254 aa6.9□□□□□ -1.31
TMEM39A-201ENST00000319172 KLLNB2CW77 178 aa6.89□□□□□ -1.31
TMEM39A-201ENST00000319172 UBE2WQ96B02 151 aa6.89□□□□□ -1.31
TMEM39A-201ENST00000319172 ATP5G1P05496 136 aa6.89□□□□□ -1.31
TMEM39A-201ENST00000319172 INSL3P51460 131 aa6.89□□□□□ -1.31
TMEM39A-201ENST00000319172 PCP2Q8IVA1 136 aa6.89□□□□□ -1.31
TMEM39A-201ENST00000319172 TTTY13Q9BZ97 58 aa6.89□□□□□ -1.31
TMEM39A-201ENST00000319172 UNC79Q9P2D8 2635 aa6.89□□□□□ -1.31
TMEM39A-201ENST00000319172 BRI3O95415 125 aa6.89□□□□□ -1.31
TMEM39A-201ENST00000319172 OCIAD2Q56VL3 154 aa6.89□□□□□ -1.31
TMEM39A-201ENST00000319172 PLEKHB2Q96CS7 222 aa6.89□□□□□ -1.31
TMEM39A-201ENST00000319172 RNF185Q96GF1 192 aa6.89□□□□□ -1.31
TMEM39A-201ENST00000319172 NPSP0C0P6 89 aa6.88□□□□□ -1.31
TMEM39A-201ENST00000319172 PFN2P35080 140 aa6.88□□□□□ -1.31
TMEM39A-201ENST00000319172 ODF3L2Q3SX64 289 aa6.88□□□□□ -1.31
TMEM39A-201ENST00000319172 TMEM263Q8WUH6 116 aaKnown RBP6.88□□□□□ -1.31
TMEM39A-201ENST00000319172 PTH2Q96A98 100 aa6.88□□□□□ -1.31
TMEM39A-201ENST00000319172 SIGMAR1Q99720 223 aa6.88□□□□□ -1.31
TMEM39A-201ENST00000319172 SPANXB1Q9NS25 103 aaPredicted RBP6.88□□□□□ -1.31
TMEM39A-201ENST00000319172 LRBAP50851 2863 aa6.88□□□□□ -1.31
TMEM39A-201ENST00000319172 IGKV2D-24A0A075B6R9 120 aa6.88□□□□□ -1.31
TMEM39A-201ENST00000319172 COX8AP10176 69 aa6.88□□□□□ -1.31
TMEM39A-201ENST00000319172 GYPEP15421 78 aa6.88□□□□□ -1.31
TMEM39A-201ENST00000319172 PROK1P58294 105 aa6.88□□□□□ -1.31
TMEM39A-201ENST00000319172 LINC01545Q5VT33 79 aa6.88□□□□□ -1.31
TMEM39A-201ENST00000319172 OPRPNQ99935 248 aaPredicted RBP6.88□□□□□ -1.31
TMEM39A-201ENST00000319172 ZNF580Q9UK33 172 aa6.87□□□□□ -1.31
TMEM39A-201ENST00000319172 SPANXDQ9BXN6 97 aa6.87□□□□□ -1.31
TMEM39A-201ENST00000319172 SPCS1Q9Y6A9 102 aa6.87□□□□□ -1.31
TMEM39A-201ENST00000319172 A0A0J9YXV3 536 aa6.87□□□□□ -1.31
TMEM39A-201ENST00000319172 K7EQD1 137 aa6.87□□□□□ -1.31
TMEM39A-201ENST00000319172 SOCS3O14543 225 aa6.87□□□□□ -1.31
TMEM39A-201ENST00000319172 CCL18P55774 89 aa6.87□□□□□ -1.31
TMEM39A-201ENST00000319172 NXPH4O95158 308 aa6.87□□□□□ -1.31
TMEM39A-201ENST00000319172 CRYBA4P53673 196 aa6.87□□□□□ -1.31
TMEM39A-201ENST00000319172 HERV-K104P63124 156 aa6.87□□□□□ -1.31
TMEM39A-201ENST00000319172 CEMP1Q6PRD7 247 aaPredicted RBP6.87□□□□□ -1.31
TMEM39A-201ENST00000319172 BOD1L2Q8IYS8 172 aa6.87□□□□□ -1.31
TMEM39A-201ENST00000319172 KIR2DL5BA0A0G2JN68 375 aa6.86□□□□□ -1.31
TMEM39A-201ENST00000319172 KIR2DL5BA0A0G2JPC4 375 aa6.86□□□□□ -1.31
TMEM39A-201ENST00000319172 K7EMI3 77 aa6.86□□□□□ -1.31
TMEM39A-201ENST00000319172 SHISA2Q6UWI4 295 aa6.86□□□□□ -1.31
TMEM39A-201ENST00000319172 KIR2DL5AQ8N109 375 aa6.86□□□□□ -1.31
TMEM39A-201ENST00000319172 TRBV7-3A0A075B6L6 115 aa6.86□□□□□ -1.31
TMEM39A-201ENST00000319172 RNASE8Q8TDE3 154 aaKnown RBP6.86□□□□□ -1.31
TMEM39A-201ENST00000319172 A0A096LNT2 108 aa6.85□□□□□ -1.31
TMEM39A-201ENST00000319172 SPINK8P0C7L1 97 aa6.85□□□□□ -1.31
TMEM39A-201ENST00000319172 LINC00310P59036 64 aa6.85□□□□□ -1.31
TMEM39A-201ENST00000319172 MYMXA0A1B0GTQ4 84 aa6.85□□□□□ -1.31
TMEM39A-201ENST00000319172 MRPL23Q16540 153 aaKnown RBP6.85□□□□□ -1.31
TMEM39A-201ENST00000319172 NDUFA7O95182 113 aa6.85□□□□□ -1.31
TMEM39A-201ENST00000319172 XCL1P47992 114 aa6.85□□□□□ -1.31
TMEM39A-201ENST00000319172 IGLV10-54A0A075B6I4 117 aa6.85□□□□□ -1.31
TMEM39A-201ENST00000319172 HHLA3Q9XRX5 114 aa6.85□□□□□ -1.31
TMEM39A-201ENST00000319172 A0A1B0GWB2 263 aa6.84□□□□□ -1.31
TMEM39A-201ENST00000319172 ATP6V0E2Q8NHE4 81 aa6.84□□□□□ -1.31
TMEM39A-201ENST00000319172 BAALCQ8WXS3 180 aa6.84□□□□□ -1.31
TMEM39A-201ENST00000319172 RMI2Q96E14 147 aa6.84□□□□□ -1.31
TMEM39A-201ENST00000319172 J3QQQ9 107 aa6.84□□□□□ -1.31
TMEM39A-201ENST00000319172 TACC2O95359 2948 aa6.84□□□□□ -1.31
TMEM39A-201ENST00000319172 FSHBP01225 129 aa6.84□□□□□ -1.31
TMEM39A-201ENST00000319172 OXLD1Q5BKU9 147 aa6.84□□□□□ -1.31
TMEM39A-201ENST00000319172 TOMM6Q96B49 74 aa6.84□□□□□ -1.31
TMEM39A-201ENST00000319172 C1orf43Q9BWL3 253 aa6.84□□□□□ -1.31
TMEM39A-201ENST00000319172 TP73-AS1Q9UF72 201 aa6.84□□□□□ -1.31
TMEM39A-201ENST00000319172 GCN1Q92616 2671 aaKnown RBP6.83□□□□□ -1.32
TMEM39A-201ENST00000319172 IGLL5B9A064 214 aa6.83□□□□□ -1.32
TMEM39A-201ENST00000319172 DNAJC30Q96LL9 226 aa6.83□□□□□ -1.32
TMEM39A-201ENST00000319172 NDUFA12Q9UI09 145 aa6.83□□□□□ -1.32
TMEM39A-201ENST00000319172 WDFY3Q8IZQ1 3526 aa6.83□□□□□ -1.32
TMEM39A-201ENST00000319172 FAM222AQ5U5X8 452 aa6.83□□□□□ -1.32
TMEM39A-201ENST00000319172 C20orf203Q8NBC4 194 aa6.83□□□□□ -1.32
TMEM39A-201ENST00000319172 M0QY20 66 aa6.83□□□□□ -1.32
TMEM39A-201ENST00000319172 FGF6P10767 208 aa6.83□□□□□ -1.32
TMEM39A-201ENST00000319172 Q6ZVH6 145 aa6.83□□□□□ -1.32
TMEM39A-201ENST00000319172 IGHV3-30P01768 117 aa6.83□□□□□ -1.32
TMEM39A-201ENST00000319172 IGHV3-33P01772 117 aa6.83□□□□□ -1.32
TMEM39A-201ENST00000319172 IGHV3-30-3P0DP02 117 aa6.83□□□□□ -1.32
TMEM39A-201ENST00000319172 IGHV3-30-5P0DP03 117 aa6.83□□□□□ -1.32
TMEM39A-201ENST00000319172 SAMD5Q5TGI4 173 aa6.83□□□□□ -1.32
TMEM39A-201ENST00000319172 ERG28Q9UKR5 140 aa6.83□□□□□ -1.32
TMEM39A-201ENST00000319172 GHRHP01286 108 aa6.82□□□□□ -1.32
TMEM39A-201ENST00000319172 PRB2P02812 416 aaPredicted RBP6.82□□□□□ -1.32
TMEM39A-201ENST00000319172 CFAP126Q5VTH2 177 aa6.82□□□□□ -1.32
TMEM39A-201ENST00000319172 C5orf38Q86SI9 138 aa6.82□□□□□ -1.32
TMEM39A-201ENST00000319172 Q8N2B8 174 aa6.82□□□□□ -1.32
TMEM39A-201ENST00000319172 NRACQ8N912 160 aa6.82□□□□□ -1.32
TMEM39A-201ENST00000319172 CNFNQ9BYD5 112 aa6.82□□□□□ -1.32
TMEM39A-201ENST00000319172 U3KQK5 164 aa6.82□□□□□ -1.32
TMEM39A-201ENST00000319172 C16orf95Q9H693 158 aa6.82□□□□□ -1.32
TMEM39A-201ENST00000319172 ICOSQ9Y6W8 199 aa6.82□□□□□ -1.32
TMEM39A-201ENST00000319172 C11orf86A6NJI1 115 aa6.82□□□□□ -1.32
TMEM39A-201ENST00000319172 IGLV1-51P01701 117 aa6.82□□□□□ -1.32
TMEM39A-201ENST00000319172 CRYGDP07320 174 aa6.82□□□□□ -1.32
TMEM39A-201ENST00000319172 DAZ2Q13117 558 aaKnown RBP6.82□□□□□ -1.32
TMEM39A-201ENST00000319172 AMTNQ6UX39 209 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms