RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 NFE4Q86UQ8 179 aa14.94□□□□□ -0.02
TTC39C-202ENST00000317571 INSP01308 110 aa14.94□□□□□ -0.02
TTC39C-202ENST00000317571 MTURNQ8N3F0 131 aa14.94□□□□□ -0.02
TTC39C-202ENST00000317571 LINC00467Q9BRT7 94 aa14.94□□□□□ -0.02
TTC39C-202ENST00000317571 SPANXB1Q9NS25 103 aaPredicted RBP14.94□□□□□ -0.02
TTC39C-202ENST00000317571 MTORP42345 2549 aa14.94□□□□□ -0.02
TTC39C-202ENST00000317571 CEMP1Q6PRD7 247 aaPredicted RBP14.93□□□□□ -0.02
TTC39C-202ENST00000317571 LINC01006Q8NI28 216 aa14.93□□□□□ -0.02
TTC39C-202ENST00000317571 CIDEAO60543 219 aa14.92□□□□□ -0.02
TTC39C-202ENST00000317571 C1orf158Q8N1D5 194 aa14.92□□□□□ -0.02
TTC39C-202ENST00000317571 PGPEP1Q9NXJ5 209 aa14.92□□□□□ -0.02
TTC39C-202ENST00000317571 A0A0J9YY99 117 aa14.92□□□□□ -0.02
TTC39C-202ENST00000317571 SRSF9Q13242 221 aaKnown RBP eCLIP14.92□□□□□ -0.02
TTC39C-202ENST00000317571 PIK3CD-AS1Q5SR53 167 aa14.92□□□□□ -0.02
TTC39C-202ENST00000317571 SH2D6Q7Z4S9 175 aa14.92□□□□□ -0.02
TTC39C-202ENST00000317571 TEX29Q8N6K0 151 aa14.92□□□□□ -0.02
TTC39C-202ENST00000317571 PTH2Q96A98 100 aa14.92□□□□□ -0.02
TTC39C-202ENST00000317571 YAE1D1Q9NRH1 226 aa14.92□□□□□ -0.02
TTC39C-202ENST00000317571 HERVK_113P61574 105 aa14.91□□□□□ -0.02
TTC39C-202ENST00000317571 SETXQ7Z333 2677 aaKnown RBP14.91□□□□□ -0.02
TTC39C-202ENST00000317571 A0A0J9YXV3 536 aa14.91□□□□□ -0.02
TTC39C-202ENST00000317571 BEAN1Q3B7T3 259 aa14.91□□□□□ -0.02
TTC39C-202ENST00000317571 PRO0461Q9UI25 63 aa14.91□□□□□ -0.02
TTC39C-202ENST00000317571 PLA2G2AP14555 144 aa14.9□□□□□ -0.02
TTC39C-202ENST00000317571 ZNF22P17026 224 aaPredicted RBP14.9□□□□□ -0.02
TTC39C-202ENST00000317571 SVIPQ8NHG7 77 aa14.9□□□□□ -0.02
TTC39C-202ENST00000317571 TRAV25A0A0B4J276 109 aa14.9□□□□□ -0.02
TTC39C-202ENST00000317571 ETDBQ3ZM63 59 aa14.9□□□□□ -0.02
TTC39C-202ENST00000317571 GAGE13Q4V321 117 aa14.9□□□□□ -0.02
TTC39C-202ENST00000317571 CLUHP3Q96NS8 147 aa14.9□□□□□ -0.02
TTC39C-202ENST00000317571 HELZ2Q9BYK8 2649 aaKnown RBP14.89□□□□□ -0.03
TTC39C-202ENST00000317571 TMEM223A0PJW6 202 aa14.89□□□□□ -0.03
TTC39C-202ENST00000317571 UBE2D1P51668 147 aa14.89□□□□□ -0.03
TTC39C-202ENST00000317571 CHCHD7Q9BUK0 85 aa14.89□□□□□ -0.03
TTC39C-202ENST00000317571 TNFRSF18Q9Y5U5 241 aa14.89□□□□□ -0.03
TTC39C-202ENST00000317571 KMT2BQ9UMN6 2715 aaPredicted RBP14.89□□□□□ -0.03
TTC39C-202ENST00000317571 RNASE13Q5GAN3 156 aaKnown RBP14.88□□□□□ -0.03
TTC39C-202ENST00000317571 IGHV3OR16-12A0A075B7B8 117 aa14.88□□□□□ -0.03
TTC39C-202ENST00000317571 TMEM238LA0A1B0GVL6 79 aa14.88□□□□□ -0.03
TTC39C-202ENST00000317571 A6NJY4 79 aa14.88□□□□□ -0.03
TTC39C-202ENST00000317571 IGHV3-38A0A0C4DH36 116 aa14.87□□□□□ -0.03
TTC39C-202ENST00000317571 J3QQQ9 107 aa14.87□□□□□ -0.03
TTC39C-202ENST00000317571 RS1O15537 224 aa14.87□□□□□ -0.03
TTC39C-202ENST00000317571 IGHV3-53P01767 116 aa14.87□□□□□ -0.03
TTC39C-202ENST00000317571 STHQ8IWL8 128 aa14.87□□□□□ -0.03
TTC39C-202ENST00000317571 IGHV3-64A0A075B6Q5 118 aa14.87□□□□□ -0.03
TTC39C-202ENST00000317571 RNASE1P07998 156 aaKnown RBP14.87□□□□□ -0.03
TTC39C-202ENST00000317571 IL17DQ8TAD2 202 aa14.87□□□□□ -0.03
TTC39C-202ENST00000317571 SPXQ9BT56 116 aa14.87□□□□□ -0.03
TTC39C-202ENST00000317571 JMJD1CQ15652 2540 aa14.86□□□□□ -0.03
TTC39C-202ENST00000317571 RHODO00212 210 aa14.86□□□□□ -0.03
TTC39C-202ENST00000317571 VCX2Q9H322 139 aa14.86□□□□□ -0.03
TTC39C-202ENST00000317571 PYGO1Q9Y3Y4 419 aa14.86□□□□□ -0.03
TTC39C-202ENST00000317571 WFDC10AQ9H1F0 79 aa14.86□□□□□ -0.03
TTC39C-202ENST00000317571 TSSC4Q9Y5U2 329 aaPredicted RBP14.86□□□□□ -0.03
TTC39C-202ENST00000317571 UNC79Q9P2D8 2635 aa14.86□□□□□ -0.03
TTC39C-202ENST00000317571 TSPAN13O95857 204 aa14.85□□□□□ -0.03
TTC39C-202ENST00000317571 SFTA2Q6UW10 78 aa14.85□□□□□ -0.03
TTC39C-202ENST00000317571 C16orf95Q9H693 158 aa14.85□□□□□ -0.03
TTC39C-202ENST00000317571 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.85□□□□□ -0.03
TTC39C-202ENST00000317571 IGKV2-29A2NJV5 120 aaPredicted RBP14.85□□□□□ -0.03
TTC39C-202ENST00000317571 APOMO95445 188 aa14.85□□□□□ -0.03
TTC39C-202ENST00000317571 GIG44P09565 113 aaPredicted RBP14.84□□□□□ -0.03
TTC39C-202ENST00000317571 ADARB2-AS1A8MUL3 147 aa14.83□□□□□ -0.04
TTC39C-202ENST00000317571 SLC25A29Q8N8R3 303 aa14.83□□□□□ -0.04
TTC39C-202ENST00000317571 UBE2D4Q9Y2X8 147 aa14.83□□□□□ -0.04
TTC39C-202ENST00000317571 LEPROTO15243 131 aa14.83□□□□□ -0.04
TTC39C-202ENST00000317571 IGHV3-30P01768 117 aa14.83□□□□□ -0.04
TTC39C-202ENST00000317571 IGHV3-30-5P0DP03 117 aa14.83□□□□□ -0.04
TTC39C-202ENST00000317571 J3QKU1 62 aa14.82□□□□□ -0.04
TTC39C-202ENST00000317571 LGALS3P17931 250 aaKnown RBP14.82□□□□□ -0.04
TTC39C-202ENST00000317571 INSL3P51460 131 aa14.82□□□□□ -0.04
TTC39C-202ENST00000317571 LOC107984156A0A0G2JMH3 177 aa14.81□□□□□ -0.04
TTC39C-202ENST00000317571 MRPS36P82909 103 aaKnown RBP14.81□□□□□ -0.04
TTC39C-202ENST00000317571 NDUFA11Q86Y39 141 aa14.81□□□□□ -0.04
TTC39C-202ENST00000317571 ARL17AQ8IVW1 177 aa14.81□□□□□ -0.04
TTC39C-202ENST00000317571 SMR3AQ99954 134 aa14.81□□□□□ -0.04
TTC39C-202ENST00000317571 TRGV1A0A0A0MS02 117 aa14.8□□□□□ -0.04
TTC39C-202ENST00000317571 Q6ZUT4 128 aa14.8□□□□□ -0.04
TTC39C-202ENST00000317571 GTSF1LQ9H1H1 148 aa14.8□□□□□ -0.04
TTC39C-202ENST00000317571 J3QR89 54 aa14.8□□□□□ -0.04
TTC39C-202ENST00000317571 SMCPP49901 116 aaPredicted RBP14.8□□□□□ -0.04
TTC39C-202ENST00000317571 Q6ZTI0 123 aa14.8□□□□□ -0.04
TTC39C-202ENST00000317571 C10orf126Q8N4M7 172 aa14.8□□□□□ -0.04
TTC39C-202ENST00000317571 C19orf73Q9NVV2 129 aa14.8□□□□□ -0.04
TTC39C-202ENST00000317571 GAGE12HA6NDE8 117 aa14.79□□□□□ -0.04
TTC39C-202ENST00000317571 CFC1BP0CG36 223 aa14.79□□□□□ -0.04
TTC39C-202ENST00000317571 CFC1P0CG37 223 aa14.79□□□□□ -0.04
TTC39C-202ENST00000317571 PSMB2P49721 201 aa14.79□□□□□ -0.04
TTC39C-202ENST00000317571 UBE2D3P61077 147 aa14.79□□□□□ -0.04
TTC39C-202ENST00000317571 UBE2D2P62837 147 aa14.79□□□□□ -0.04
TTC39C-202ENST00000317571 NOTCH3Q9UM47 2321 aa14.79□□□□□ -0.04
TTC39C-202ENST00000317571 DNAJC30Q96LL9 226 aa14.78□□□□□ -0.04
TTC39C-202ENST00000317571 FASNP49327 2511 aaKnown RBP14.78□□□□□ -0.04
TTC39C-202ENST00000317571 TRAV8-3A0A0A6YYJ7 113 aa14.78□□□□□ -0.04
TTC39C-202ENST00000317571 EIF4EBP3O60516 100 aaPredicted RBP14.77□□□□□ -0.05
TTC39C-202ENST00000317571 IGLV1-51P01701 117 aa14.77□□□□□ -0.05
TTC39C-202ENST00000317571 SPANXA1Q9NS26 97 aa14.77□□□□□ -0.05
TTC39C-202ENST00000317571 IGHV3-30-3P0DP02 117 aa14.76□□□□□ -0.05
TTC39C-202ENST00000317571 CRYBA4P53673 196 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms