RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 NXPH4O95158 308 aa12.73□□□□□ -0.37
SCAMP4-201ENST00000316097 BRI3O95415 125 aa12.73□□□□□ -0.37
SCAMP4-201ENST00000316097 OPRPNQ99935 248 aaPredicted RBP12.73□□□□□ -0.37
SCAMP4-201ENST00000316097 ANK3Q12955 4377 aaKnown RBP12.73□□□□□ -0.37
SCAMP4-201ENST00000316097 CITED1Q99966 193 aa12.73□□□□□ -0.37
SCAMP4-201ENST00000316097 ESM1Q9NQ30 184 aa12.73□□□□□ -0.37
SCAMP4-201ENST00000316097 ZNF256Q9Y2P7 627 aaPredicted RBP12.73□□□□□ -0.37
SCAMP4-201ENST00000316097 FAM74A4Q5TZK3 123 aa12.72□□□□□ -0.37
SCAMP4-201ENST00000316097 TMEM263Q8WUH6 116 aaKnown RBP12.72□□□□□ -0.37
SCAMP4-201ENST00000316097 Q1RN00 199 aa12.71□□□□□ -0.37
SCAMP4-201ENST00000316097 DEFB136Q30KP8 78 aa12.71□□□□□ -0.37
SCAMP4-201ENST00000316097 APRG1Q8IVJ8 170 aa12.71□□□□□ -0.37
SCAMP4-201ENST00000316097 FAM159AQ6UWV7 190 aa12.71□□□□□ -0.38
SCAMP4-201ENST00000316097 NTN5Q8WTR8 489 aaPredicted RBP12.71□□□□□ -0.38
SCAMP4-201ENST00000316097 DNAJC9-AS1A6NH13 148 aa12.7□□□□□ -0.38
SCAMP4-201ENST00000316097 MUSTN1Q8IVN3 82 aa12.7□□□□□ -0.38
SCAMP4-201ENST00000316097 RHPN1-AS1Q9BWJ2 59 aa12.7□□□□□ -0.38
SCAMP4-201ENST00000316097 ELANEP08246 267 aa12.7□□□□□ -0.38
SCAMP4-201ENST00000316097 GAGE5Q13069 117 aa12.7□□□□□ -0.38
SCAMP4-201ENST00000316097 GAGE6Q13070 117 aa12.7□□□□□ -0.38
SCAMP4-201ENST00000316097 C11orf44Q8N8P7 122 aa12.7□□□□□ -0.38
SCAMP4-201ENST00000316097 DUX3Q96PT4 197 aa12.7□□□□□ -0.38
SCAMP4-201ENST00000316097 B5MCH6 92 aa12.69□□□□□ -0.38
SCAMP4-201ENST00000316097 LEPROTO15243 131 aa12.69□□□□□ -0.38
SCAMP4-201ENST00000316097 SNCGO76070 127 aa12.69□□□□□ -0.38
SCAMP4-201ENST00000316097 TRAV4A0A0B4J268 109 aa12.68□□□□□ -0.38
SCAMP4-201ENST00000316097 TRBV27A0A0K0K1C4 114 aa12.68□□□□□ -0.38
SCAMP4-201ENST00000316097 TMEM223A0PJW6 202 aa12.68□□□□□ -0.38
SCAMP4-201ENST00000316097 NHLRC4P0CG21 123 aaPredicted RBP12.68□□□□□ -0.38
SCAMP4-201ENST00000316097 GAGE2BQ13066 116 aa12.68□□□□□ -0.38
SCAMP4-201ENST00000316097 GAGE2EQ4V326 116 aa12.68□□□□□ -0.38
SCAMP4-201ENST00000316097 GAGE2DQ9UEU5 116 aa12.68□□□□□ -0.38
SCAMP4-201ENST00000316097 A0A0B4J2C4 111 aa12.68□□□□□ -0.38
SCAMP4-201ENST00000316097 CRLF1O75462 422 aa12.68□□□□□ -0.38
SCAMP4-201ENST00000316097 Q8N1Y9 231 aa12.68□□□□□ -0.38
SCAMP4-201ENST00000316097 ZNF580Q9UK33 172 aa12.68□□□□□ -0.38
SCAMP4-201ENST00000316097 P0DMU3 169 aa12.67□□□□□ -0.38
SCAMP4-201ENST00000316097 FAM231AP0DMU4 169 aa12.67□□□□□ -0.38
SCAMP4-201ENST00000316097 FAM231CP0DMU5 169 aa12.67□□□□□ -0.38
SCAMP4-201ENST00000316097 SYNJ2BPP57105 145 aa12.67□□□□□ -0.38
SCAMP4-201ENST00000316097 DAZ1Q9NQZ3 744 aaKnown RBP12.67□□□□□ -0.38
SCAMP4-201ENST00000316097 M0QXV9 152 aa12.67□□□□□ -0.38
SCAMP4-201ENST00000316097 RHODO00212 210 aa12.67□□□□□ -0.38
SCAMP4-201ENST00000316097 KHDC1LQ5JSQ8 128 aa12.67□□□□□ -0.38
SCAMP4-201ENST00000316097 Q6ZSV7 163 aa12.67□□□□□ -0.38
SCAMP4-201ENST00000316097 TRAV12-3A0A0B4J271 114 aa12.66□□□□□ -0.38
SCAMP4-201ENST00000316097 LINC01620Q4KN68 170 aa12.66□□□□□ -0.38
SCAMP4-201ENST00000316097 KLLNB2CW77 178 aa12.66□□□□□ -0.38
SCAMP4-201ENST00000316097 ATXN8Q156A1 80 aa12.66□□□□□ -0.38
SCAMP4-201ENST00000316097 ZNF56Q15929 161 aa12.66□□□□□ -0.38
SCAMP4-201ENST00000316097 TRBV7-9A0A0J9YWB2 115 aa12.65□□□□□ -0.38
SCAMP4-201ENST00000316097 ZNF22P17026 224 aaPredicted RBP12.65□□□□□ -0.38
SCAMP4-201ENST00000316097 TEX49A0A1B0GTD5 131 aa12.65□□□□□ -0.38
SCAMP4-201ENST00000316097 LGALS9O00182 355 aa12.65□□□□□ -0.38
SCAMP4-201ENST00000316097 TRBV6-5A0A0K0K1A5 114 aa12.65□□□□□ -0.39
SCAMP4-201ENST00000316097 NDUFV3P56181 108 aaKnown RBP12.65□□□□□ -0.39
SCAMP4-201ENST00000316097 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.64□□□□□ -0.39
SCAMP4-201ENST00000316097 A0A0J9YXV3 536 aa12.64□□□□□ -0.39
SCAMP4-201ENST00000316097 Q8N2B8 174 aa12.64□□□□□ -0.39
SCAMP4-201ENST00000316097 HIVEP2P31629 2446 aa12.64□□□□□ -0.39
SCAMP4-201ENST00000316097 HOXD3P31249 432 aaPredicted RBP12.64□□□□□ -0.39
SCAMP4-201ENST00000316097 ADARB2-AS1A8MUL3 147 aa12.63□□□□□ -0.39
SCAMP4-201ENST00000316097 SLURP1P55000 103 aa12.63□□□□□ -0.39
SCAMP4-201ENST00000316097 UBE2E2Q96LR5 201 aa12.63□□□□□ -0.39
SCAMP4-201ENST00000316097 NSUN5P1Q3KNT7 163 aa12.63□□□□□ -0.39
SCAMP4-201ENST00000316097 TRAV8-4A0A0B4J246 113 aa12.62□□□□□ -0.39
SCAMP4-201ENST00000316097 TMEM89A2RUT3 159 aa12.62□□□□□ -0.39
SCAMP4-201ENST00000316097 M0QY20 66 aa12.62□□□□□ -0.39
SCAMP4-201ENST00000316097 M0R2P5 195 aa12.62□□□□□ -0.39
SCAMP4-201ENST00000316097 TRIAP1O43715 76 aa12.62□□□□□ -0.39
SCAMP4-201ENST00000316097 TTC32Q5I0X7 151 aa12.62□□□□□ -0.39
SCAMP4-201ENST00000316097 NIPBLQ6KC79 2804 aaeCLIP12.62□□□□□ -0.39
SCAMP4-201ENST00000316097 A0A0J9YXY3 114 aa12.62□□□□□ -0.39
SCAMP4-201ENST00000316097 RHOHQ15669 191 aa12.62□□□□□ -0.39
SCAMP4-201ENST00000316097 MDFICQ9P1T7 246 aa12.62□□□□□ -0.39
SCAMP4-201ENST00000316097 TRBV10-2A0A0K0K1G8 114 aa12.61□□□□□ -0.39
SCAMP4-201ENST00000316097 A0A1W2PRX2 142 aa12.61□□□□□ -0.39
SCAMP4-201ENST00000316097 ODF3Q96PU9 254 aa12.61□□□□□ -0.39
SCAMP4-201ENST00000316097 CCDC179H3BU77 68 aa12.6□□□□□ -0.39
SCAMP4-201ENST00000316097 LY6G6DO95868 133 aa12.6□□□□□ -0.39
SCAMP4-201ENST00000316097 IFITM1P13164 125 aa12.6□□□□□ -0.39
SCAMP4-201ENST00000316097 C20orf203Q8NBC4 194 aa12.6□□□□□ -0.39
SCAMP4-201ENST00000316097 SPXQ9BT56 116 aa12.6□□□□□ -0.39
SCAMP4-201ENST00000316097 IGLV4-3A0A075B6K6 122 aa12.6□□□□□ -0.39
SCAMP4-201ENST00000316097 H3BMM0 161 aa12.6□□□□□ -0.39
SCAMP4-201ENST00000316097 IGKV3-20P01619 116 aa12.6□□□□□ -0.39
SCAMP4-201ENST00000316097 PRSS2P07478 247 aa12.6□□□□□ -0.39
SCAMP4-201ENST00000316097 C15orf53Q8NAA6 179 aa12.6□□□□□ -0.39
SCAMP4-201ENST00000316097 UBE2WQ96B02 151 aa12.6□□□□□ -0.39
SCAMP4-201ENST00000316097 SORL1Q92673 2214 aa12.6□□□□□ -0.39
SCAMP4-201ENST00000316097 FLNBO75369 2602 aaKnown RBP12.6□□□□□ -0.39
SCAMP4-201ENST00000316097 TRAV12-2A0A075B6T6 113 aa12.59□□□□□ -0.39
SCAMP4-201ENST00000316097 RPL13AP40429 203 aaKnown RBP12.59□□□□□ -0.39
SCAMP4-201ENST00000316097 IGHV3-16A0A0C4DH30 117 aa12.59□□□□□ -0.39
SCAMP4-201ENST00000316097 TRBV30A0A0K0K1B3 111 aa12.59□□□□□ -0.39
SCAMP4-201ENST00000316097 K7EMT4 169 aa12.59□□□□□ -0.39
SCAMP4-201ENST00000316097 TMEM86BQ8N661 226 aa12.59□□□□□ -0.39
SCAMP4-201ENST00000316097 RNF152Q8N8N0 203 aa12.59□□□□□ -0.39
SCAMP4-201ENST00000316097 C9orf85Q96MD7 179 aa12.59□□□□□ -0.39
SCAMP4-201ENST00000316097 A0A0J9YX75 114 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 160.9 ms