RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 CHCHD1Q96BP2 118 aaKnown RBP2.58□□□□□ -2
SMCO3-201ENST00000316048 KCNS1Q96KK3 526 aa2.58□□□□□ -2
SMCO3-201ENST00000316048 ANAPC11Q9NYG5 84 aa2.58□□□□□ -2
SMCO3-201ENST00000316048 AKAP6Q13023 2319 aa2.58□□□□□ -2
SMCO3-201ENST00000316048 ZNF462Q96JM2 2506 aa2.58□□□□□ -2
SMCO3-201ENST00000316048 CFAP46Q8IYW2 2715 aa2.57□□□□□ -2
SMCO3-201ENST00000316048 TRAV21A0A0B4J279 112 aa2.57□□□□□ -2
SMCO3-201ENST00000316048 A8MU10 97 aa2.57□□□□□ -2
SMCO3-201ENST00000316048 LINC01619G3V211 115 aa2.57□□□□□ -2
SMCO3-201ENST00000316048 ZNF324O75467 553 aaPredicted RBP2.57□□□□□ -2
SMCO3-201ENST00000316048 IGLC6P0CF74 106 aa2.57□□□□□ -2
SMCO3-201ENST00000316048 ZNF705DP0CH99 300 aaPredicted RBP2.57□□□□□ -2
SMCO3-201ENST00000316048 ZNF705BP0CI00 300 aaPredicted RBP2.57□□□□□ -2
SMCO3-201ENST00000316048 NTF3P20783 257 aa2.57□□□□□ -2
SMCO3-201ENST00000316048 SYNJ2BPP57105 145 aa2.57□□□□□ -2
SMCO3-201ENST00000316048 HERVK_113P61574 105 aa2.57□□□□□ -2
SMCO3-201ENST00000316048 FAM104BQ5XKR9 115 aa2.57□□□□□ -2
SMCO3-201ENST00000316048 EBLN2Q6P2I7 272 aa2.57□□□□□ -2
SMCO3-201ENST00000316048 PCP2Q8IVA1 136 aa2.57□□□□□ -2
SMCO3-201ENST00000316048 C15orf56Q8N910 161 aa2.57□□□□□ -2
SMCO3-201ENST00000316048 ZNF418Q8TF45 676 aaPredicted RBP2.57□□□□□ -2
SMCO3-201ENST00000316048 TIMM17AQ99595 171 aa2.57□□□□□ -2
SMCO3-201ENST00000316048 CR1P17927 2039 aa2.57□□□□□ -2
SMCO3-201ENST00000316048 ABCA1O95477 2261 aa2.57□□□□□ -2
SMCO3-201ENST00000316048 M0R2Z0 102 aa2.57□□□□□ -2
SMCO3-201ENST00000316048 OR5AL1P0C617 328 aa2.57□□□□□ -2
SMCO3-201ENST00000316048 CKS2P33552 79 aa2.57□□□□□ -2
SMCO3-201ENST00000316048 RNASE4P34096 147 aaKnown RBP2.57□□□□□ -2
SMCO3-201ENST00000316048 PFN2P35080 140 aa2.57□□□□□ -2
SMCO3-201ENST00000316048 PKIAP61925 76 aa2.57□□□□□ -2
SMCO3-201ENST00000316048 Q6ZVH6 145 aa2.57□□□□□ -2
SMCO3-201ENST00000316048 ORMDL3Q8N138 153 aa2.57□□□□□ -2
SMCO3-201ENST00000316048 DCANP1Q8TF63 244 aa2.57□□□□□ -2
SMCO3-201ENST00000316048 C4orf3Q8WVX3 66 aa2.57□□□□□ -2
SMCO3-201ENST00000316048 CNFNQ9BYD5 112 aa2.57□□□□□ -2
SMCO3-201ENST00000316048 TMEM191AQ9H0A3 160 aa2.57□□□□□ -2
SMCO3-201ENST00000316048 MS4A6AQ9H2W1 248 aa2.57□□□□□ -2
SMCO3-201ENST00000316048 MAP1LC3AQ9H492 121 aa2.57□□□□□ -2
SMCO3-201ENST00000316048 UBR5O95071 2799 aaPredicted RBP2.57□□□□□ -2
SMCO3-201ENST00000316048 SPTAN1Q13813 2472 aaKnown RBP2.57□□□□□ -2
SMCO3-201ENST00000316048 PRRC2AP48634 2157 aaKnown RBP2.56□□□□□ -2
SMCO3-201ENST00000316048 USP9XQ93008 2570 aaPredicted RBP2.56□□□□□ -2
SMCO3-201ENST00000316048 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.56□□□□□ -2
SMCO3-201ENST00000316048 C2orf70A6NJV1 201 aa2.56□□□□□ -2
SMCO3-201ENST00000316048 S100A4P26447 101 aaKnown RBP2.56□□□□□ -2
SMCO3-201ENST00000316048 TSPOP30536 169 aa2.56□□□□□ -2
SMCO3-201ENST00000316048 KRTDAPP60985 99 aa2.56□□□□□ -2
SMCO3-201ENST00000316048 CKS1BP61024 79 aa2.56□□□□□ -2
SMCO3-201ENST00000316048 PSMG4Q5JS54 123 aa2.56□□□□□ -2
SMCO3-201ENST00000316048 SPANXN1Q5VSR9 72 aa2.56□□□□□ -2
SMCO3-201ENST00000316048 FAM19A2Q8N3H0 131 aa2.56□□□□□ -2
SMCO3-201ENST00000316048 FAM19A4Q96LR4 140 aa2.56□□□□□ -2
SMCO3-201ENST00000316048 PRELID3AQ96N28 172 aa2.56□□□□□ -2
SMCO3-201ENST00000316048 LAMTOR2Q9Y2Q5 125 aa2.56□□□□□ -2
SMCO3-201ENST00000316048 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.56□□□□□ -2
SMCO3-201ENST00000316048 TRAV2A0A0B4J234 112 aa2.56□□□□□ -2
SMCO3-201ENST00000316048 MUC21A0A0G2JKD1 596 aa2.56□□□□□ -2
SMCO3-201ENST00000316048 MUC21A0A140T8X8 626 aa2.56□□□□□ -2
SMCO3-201ENST00000316048 D6R8Y8 96 aa2.56□□□□□ -2
SMCO3-201ENST00000316048 TCF21O43680 179 aa2.56□□□□□ -2
SMCO3-201ENST00000316048 LEPROTL1O95214 131 aa2.56□□□□□ -2
SMCO3-201ENST00000316048 ZNF688P0C7X2 276 aa2.56□□□□□ -2
SMCO3-201ENST00000316048 ASIPP42127 132 aa2.56□□□□□ -2
SMCO3-201ENST00000316048 KRTAP10-3P60369 221 aa2.56□□□□□ -2
SMCO3-201ENST00000316048 PMCHL1Q16048 86 aa2.56□□□□□ -2
SMCO3-201ENST00000316048 MRPL51Q4U2R6 128 aaKnown RBP2.56□□□□□ -2
SMCO3-201ENST00000316048 ORMDL2Q53FV1 153 aa2.56□□□□□ -2
SMCO3-201ENST00000316048 FA2HQ7L5A8 372 aa2.56□□□□□ -2
SMCO3-201ENST00000316048 AMN1Q8IY45 258 aa2.56□□□□□ -2
SMCO3-201ENST00000316048 ZFAND2AQ8N6M9 145 aa2.56□□□□□ -2
SMCO3-201ENST00000316048 ODF3Q96PU9 254 aa2.56□□□□□ -2
SMCO3-201ENST00000316048 C16orf95Q9H693 158 aa2.56□□□□□ -2
SMCO3-201ENST00000316048 HSPB8Q9UJY1 196 aa2.56□□□□□ -2
SMCO3-201ENST00000316048 PHLDA3Q9Y5J5 127 aa2.56□□□□□ -2
SMCO3-201ENST00000316048 U3KQK5 164 aa2.56□□□□□ -2
SMCO3-201ENST00000316048 TACC2O95359 2948 aa2.56□□□□□ -2
SMCO3-201ENST00000316048 SPG11Q96JI7 2443 aa2.55□□□□□ -2
SMCO3-201ENST00000316048 MYO18BQ8IUG5 2567 aa2.55□□□□□ -2
SMCO3-201ENST00000316048 A0A0J9YX75 114 aa2.55□□□□□ -2
SMCO3-201ENST00000316048 LOC389332A0A1B0GUA5 103 aa2.55□□□□□ -2
SMCO3-201ENST00000316048 C20orf202A1L168 122 aa2.55□□□□□ -2
SMCO3-201ENST00000316048 DEFB136Q30KP8 78 aa2.55□□□□□ -2
SMCO3-201ENST00000316048 FOXI2Q6ZQN5 318 aa2.55□□□□□ -2
SMCO3-201ENST00000316048 OR10AG1Q8NH19 301 aa2.55□□□□□ -2
SMCO3-201ENST00000316048 DYNLRB2Q8TF09 96 aa2.55□□□□□ -2
SMCO3-201ENST00000316048 SIGMAR1Q99720 223 aa2.55□□□□□ -2
SMCO3-201ENST00000316048 VAMP8Q9BV40 100 aa2.55□□□□□ -2
SMCO3-201ENST00000316048 FLNCQ14315 2725 aa2.55□□□□□ -2
SMCO3-201ENST00000316048 ANKRD17O75179 2603 aaKnown RBP2.55□□□□□ -2
SMCO3-201ENST00000316048 FAM208BQ5VWN6 2430 aa2.55□□□□□ -2
SMCO3-201ENST00000316048 C7orf71A4D174 169 aa2.54□□□□□ -2
SMCO3-201ENST00000316048 OR4C46A6NHA9 309 aa2.54□□□□□ -2
SMCO3-201ENST00000316048 H3BVH4 76 aa2.54□□□□□ -2
SMCO3-201ENST00000316048 PPP1R17O96001 155 aa2.54□□□□□ -2
SMCO3-201ENST00000316048 C3orf79P0CE67 100 aa2.54□□□□□ -2
SMCO3-201ENST00000316048 EVI2AP22794 236 aa2.54□□□□□ -2
SMCO3-201ENST00000316048 DDTP30046 118 aa2.54□□□□□ -2
SMCO3-201ENST00000316048 IFI27P40305 119 aaPredicted RBP2.54□□□□□ -2
SMCO3-201ENST00000316048 CMC4P56277 68 aaPredicted RBP2.54□□□□□ -2
SMCO3-201ENST00000316048 DEFB1P60022 68 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms