RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 PRORYQ9H606 182 aa12.9□□□□□ -0.34
GABRB3-202ENST00000311550 HHLA3Q9XRX5 114 aa12.9□□□□□ -0.34
GABRB3-202ENST00000311550 A0A0J9YXY3 114 aa12.9□□□□□ -0.34
GABRB3-202ENST00000311550 Q6ZS46 218 aa12.9□□□□□ -0.34
GABRB3-202ENST00000311550 NRACQ8N912 160 aa12.9□□□□□ -0.34
GABRB3-202ENST00000311550 ORMDL1Q9P0S3 153 aa12.9□□□□□ -0.35
GABRB3-202ENST00000311550 Q6ZTI0 123 aa12.89□□□□□ -0.35
GABRB3-202ENST00000311550 DSCR8Q96T75 97 aa12.89□□□□□ -0.35
GABRB3-202ENST00000311550 PROK1P58294 105 aa12.88□□□□□ -0.35
GABRB3-202ENST00000311550 RPL32P62910 135 aaKnown RBP12.88□□□□□ -0.35
GABRB3-202ENST00000311550 IGHV4-4A0A075B6R2 117 aa12.88□□□□□ -0.35
GABRB3-202ENST00000311550 MIR7-3HGQ8N6C7 128 aa12.88□□□□□ -0.35
GABRB3-202ENST00000311550 TRBV10-2A0A0K0K1G8 114 aa12.88□□□□□ -0.35
GABRB3-202ENST00000311550 LINC00467Q9BRT7 94 aa12.88□□□□□ -0.35
GABRB3-202ENST00000311550 CLPSL1A2RUU4 121 aa12.87□□□□□ -0.35
GABRB3-202ENST00000311550 DNAJC9-AS1A6NH13 148 aa12.87□□□□□ -0.35
GABRB3-202ENST00000311550 TMEM263Q8WUH6 116 aaKnown RBP12.87□□□□□ -0.35
GABRB3-202ENST00000311550 IGKV2D-24A0A075B6R9 120 aa12.87□□□□□ -0.35
GABRB3-202ENST00000311550 RNASE3P12724 160 aaKnown RBP12.87□□□□□ -0.35
GABRB3-202ENST00000311550 ODF3Q96PU9 254 aa12.87□□□□□ -0.35
GABRB3-202ENST00000311550 M0QY20 66 aa12.87□□□□□ -0.35
GABRB3-202ENST00000311550 COX7A2LO14548 114 aa12.87□□□□□ -0.35
GABRB3-202ENST00000311550 ZNF22P17026 224 aaPredicted RBP12.87□□□□□ -0.35
GABRB3-202ENST00000311550 IGLV4-3A0A075B6K6 122 aa12.86□□□□□ -0.35
GABRB3-202ENST00000311550 DEFB135Q30KP9 77 aa12.86□□□□□ -0.35
GABRB3-202ENST00000311550 Q9HAA7 133 aa12.86□□□□□ -0.35
GABRB3-202ENST00000311550 IGHV3-30P01768 117 aa12.86□□□□□ -0.35
GABRB3-202ENST00000311550 IGHV3-33P01772 117 aa12.86□□□□□ -0.35
GABRB3-202ENST00000311550 IGHV3-30-5P0DP03 117 aa12.86□□□□□ -0.35
GABRB3-202ENST00000311550 MRPS12O15235 138 aaKnown RBP12.86□□□□□ -0.35
GABRB3-202ENST00000311550 SS18L2Q9UHA2 77 aa12.86□□□□□ -0.35
GABRB3-202ENST00000311550 Q6YL49 198 aa12.85□□□□□ -0.35
GABRB3-202ENST00000311550 CDKN2A-AS1Q9UH64 79 aa12.85□□□□□ -0.35
GABRB3-202ENST00000311550 ATP5G1P05496 136 aa12.85□□□□□ -0.35
GABRB3-202ENST00000311550 MIAQ16674 131 aa12.85□□□□□ -0.35
GABRB3-202ENST00000311550 C9orf66Q5T8R8 295 aa12.85□□□□□ -0.35
GABRB3-202ENST00000311550 IGHV4-31P0DP07 118 aa12.84□□□□□ -0.35
GABRB3-202ENST00000311550 LECT2O14960 151 aa12.84□□□□□ -0.35
GABRB3-202ENST00000311550 H0YGX0 51 aa12.84□□□□□ -0.35
GABRB3-202ENST00000311550 MRPL23Q16540 153 aaKnown RBP12.83□□□□□ -0.36
GABRB3-202ENST00000311550 TMEM223A0PJW6 202 aa12.83□□□□□ -0.36
GABRB3-202ENST00000311550 DEFB114Q30KQ6 69 aa12.83□□□□□ -0.36
GABRB3-202ENST00000311550 ANKRD11Q6UB99 2663 aaPredicted RBP12.83□□□□□ -0.36
GABRB3-202ENST00000311550 IGKV3D-7A0A0C4DH55 119 aa12.83□□□□□ -0.36
GABRB3-202ENST00000311550 PRM2P04554 102 aa12.83□□□□□ -0.36
GABRB3-202ENST00000311550 SPANXB1Q9NS25 103 aaPredicted RBP12.83□□□□□ -0.36
GABRB3-202ENST00000311550 ACYP1P07311 99 aa12.83□□□□□ -0.36
GABRB3-202ENST00000311550 SPART-AS1P0CW21 52 aa12.82□□□□□ -0.36
GABRB3-202ENST00000311550 TRBV10-1A0A0K0K1A3 114 aa12.82□□□□□ -0.36
GABRB3-202ENST00000311550 RBX1P62877 108 aa12.82□□□□□ -0.36
GABRB3-202ENST00000311550 TMEM126AQ9H061 195 aa12.81□□□□□ -0.36
GABRB3-202ENST00000311550 H3BT86 120 aa12.81□□□□□ -0.36
GABRB3-202ENST00000311550 NCR3O14931 201 aa12.81□□□□□ -0.36
GABRB3-202ENST00000311550 PSMB8P28062 276 aa12.81□□□□□ -0.36
GABRB3-202ENST00000311550 DEFB105AQ8NG35 78 aa12.81□□□□□ -0.36
GABRB3-202ENST00000311550 CAMK2N2Q96S95 79 aa12.81□□□□□ -0.36
GABRB3-202ENST00000311550 A0A0B4J2C4 111 aa12.8□□□□□ -0.36
GABRB3-202ENST00000311550 A8MZ25 164 aa12.8□□□□□ -0.36
GABRB3-202ENST00000311550 MRAPQ8TCY5 172 aa12.8□□□□□ -0.36
GABRB3-202ENST00000311550 TRBV27A0A0K0K1C4 114 aa12.8□□□□□ -0.36
GABRB3-202ENST00000311550 FAM236AA0A1B0GUQ0 79 aa12.8□□□□□ -0.36
GABRB3-202ENST00000311550 FAM236BA0A1B0GV22 79 aa12.8□□□□□ -0.36
GABRB3-202ENST00000311550 WFDC11Q8NEX6 87 aa12.8□□□□□ -0.36
GABRB3-202ENST00000311550 EDN2P20800 178 aa12.79□□□□□ -0.36
GABRB3-202ENST00000311550 CFAP126Q5VTH2 177 aa12.79□□□□□ -0.36
GABRB3-202ENST00000311550 C1orf43Q9BWL3 253 aa12.79□□□□□ -0.36
GABRB3-202ENST00000311550 TLN2Q9Y4G6 2542 aa12.78□□□□□ -0.36
GABRB3-202ENST00000311550 F8W735 103 aaPredicted RBP12.78□□□□□ -0.36
GABRB3-202ENST00000311550 TRACP01848 142 aa12.78□□□□□ -0.36
GABRB3-202ENST00000311550 CNFNQ9BYD5 112 aa12.78□□□□□ -0.36
GABRB3-202ENST00000311550 TEX49A0A1B0GTD5 131 aa12.78□□□□□ -0.36
GABRB3-202ENST00000311550 C18orf65Q6ZTR6 163 aa12.78□□□□□ -0.36
GABRB3-202ENST00000311550 KLLNB2CW77 178 aa12.77□□□□□ -0.36
GABRB3-202ENST00000311550 MT-ATP8P03928 68 aa12.77□□□□□ -0.36
GABRB3-202ENST00000311550 KLK12Q9UKR0 248 aa12.77□□□□□ -0.37
GABRB3-202ENST00000311550 TSHBP01222 138 aa12.76□□□□□ -0.37
GABRB3-202ENST00000311550 A0A1W2PPR1 153 aa12.76□□□□□ -0.37
GABRB3-202ENST00000311550 SPANXDQ9BXN6 97 aa12.76□□□□□ -0.37
GABRB3-202ENST00000311550 PRRC2CQ9Y520 2896 aaKnown RBP12.75□□□□□ -0.37
GABRB3-202ENST00000311550 PRO0255Q9UI72 69 aa12.75□□□□□ -0.37
GABRB3-202ENST00000311550 TRAV26-1A0A087WT03 109 aa12.75□□□□□ -0.37
GABRB3-202ENST00000311550 AVPP01185 164 aa12.75□□□□□ -0.37
GABRB3-202ENST00000311550 DCANP1Q8TF63 244 aa12.75□□□□□ -0.37
GABRB3-202ENST00000311550 POLR2KP53803 58 aaKnown RBP12.75□□□□□ -0.37
GABRB3-202ENST00000311550 Q6ZSV7 163 aa12.75□□□□□ -0.37
GABRB3-202ENST00000311550 SPAG11BQ08648 103 aa12.75□□□□□ -0.37
GABRB3-202ENST00000311550 USP9XQ93008 2570 aaPredicted RBP12.75□□□□□ -0.37
GABRB3-202ENST00000311550 TRBV6-5A0A0K0K1A5 114 aa12.75□□□□□ -0.37
GABRB3-202ENST00000311550 IGLV1-40P01703 118 aa12.75□□□□□ -0.37
GABRB3-202ENST00000311550 RPL18AQ02543 176 aaKnown RBP12.74□□□□□ -0.37
GABRB3-202ENST00000311550 TRIAP1O43715 76 aa12.74□□□□□ -0.37
GABRB3-202ENST00000311550 CRYGDP07320 174 aa12.74□□□□□ -0.37
GABRB3-202ENST00000311550 ZNF702PQ9H963 129 aa12.74□□□□□ -0.37
GABRB3-202ENST00000311550 MRGPRG-AS1Q2M3A8 158 aa12.74□□□□□ -0.37
GABRB3-202ENST00000311550 RBMY1FQ15415 496 aaKnown RBP12.73□□□□□ -0.37
GABRB3-202ENST00000311550 PIK3CD-AS1Q5SR53 167 aa12.73□□□□□ -0.37
GABRB3-202ENST00000311550 SETD2Q9BYW2 2564 aaPredicted RBP12.72□□□□□ -0.37
GABRB3-202ENST00000311550 TET2Q6N021 2002 aaPredicted RBP12.72□□□□□ -0.37
GABRB3-202ENST00000311550 C14orf132Q9NPU4 83 aa12.72□□□□□ -0.37
GABRB3-202ENST00000311550 A0A096LNJ9 63 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms