RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 HLA-DRB4P13762 266 aa4.54□□□□□ -1.68
SEC22A-201ENST00000309934 LINC00336Q6ZUF6 198 aa4.54□□□□□ -1.68
SEC22A-201ENST00000309934 TP53TG3Q9ULZ0 132 aa4.54□□□□□ -1.68
SEC22A-201ENST00000309934 HLA-DRB4X5D2U9 266 aa4.54□□□□□ -1.68
SEC22A-201ENST00000309934 C9orf85Q96MD7 179 aa4.54□□□□□ -1.68
SEC22A-201ENST00000309934 FREM2Q5SZK8 3169 aa4.54□□□□□ -1.68
SEC22A-201ENST00000309934 PIEZO2Q9H5I5 2752 aa4.54□□□□□ -1.68
SEC22A-201ENST00000309934 TRAV12-2A0A075B6T6 113 aa4.54□□□□□ -1.68
SEC22A-201ENST00000309934 LY6G6DO95868 133 aa4.54□□□□□ -1.68
SEC22A-201ENST00000309934 AVPP01185 164 aa4.54□□□□□ -1.68
SEC22A-201ENST00000309934 ARMS2P0C7Q2 107 aa4.54□□□□□ -1.68
SEC22A-201ENST00000309934 ERCC8Q13216 396 aa4.54□□□□□ -1.68
SEC22A-201ENST00000309934 LAGE3Q14657 143 aa4.54□□□□□ -1.68
SEC22A-201ENST00000309934 LINC01545Q5VT33 79 aa4.54□□□□□ -1.68
SEC22A-201ENST00000309934 C20orf197Q8N268 126 aa4.54□□□□□ -1.68
SEC22A-201ENST00000309934 Q8N8P6 123 aa4.54□□□□□ -1.68
SEC22A-201ENST00000309934 POLQO75417 2590 aa4.53□□□□□ -1.68
SEC22A-201ENST00000309934 H3BS24 57 aa4.53□□□□□ -1.68
SEC22A-201ENST00000309934 Q8TAT8 98 aa4.53□□□□□ -1.68
SEC22A-201ENST00000309934 C8orf49Q96NF6 230 aa4.53□□□□□ -1.68
SEC22A-201ENST00000309934 PRO1854Q9UHT4 67 aa4.53□□□□□ -1.68
SEC22A-201ENST00000309934 HECTD4Q9Y4D8 3996 aa4.53□□□□□ -1.68
SEC22A-201ENST00000309934 IGLV2-8P01709 118 aa4.53□□□□□ -1.68
SEC22A-201ENST00000309934 KRTAP10-9P60411 292 aa4.53□□□□□ -1.68
SEC22A-201ENST00000309934 HIST2H2BCQ6DN03 193 aa4.53□□□□□ -1.68
SEC22A-201ENST00000309934 HIST2H2BDQ6DRA6 164 aa4.53□□□□□ -1.68
SEC22A-201ENST00000309934 LINC00643Q86TS7 51 aa4.53□□□□□ -1.68
SEC22A-201ENST00000309934 TMEM141Q96I45 108 aa4.53□□□□□ -1.68
SEC22A-201ENST00000309934 TLN1Q9Y490 2541 aaKnown RBP4.53□□□□□ -1.68
SEC22A-201ENST00000309934 HLA-DMBP28068 263 aa4.53□□□□□ -1.68
SEC22A-201ENST00000309934 CFAP126Q5VTH2 177 aa4.53□□□□□ -1.68
SEC22A-201ENST00000309934 DPH3Q96FX2 82 aa4.53□□□□□ -1.68
SEC22A-201ENST00000309934 C16orf74Q96GX8 76 aa4.53□□□□□ -1.68
SEC22A-201ENST00000309934 TIMM17AQ99595 171 aa4.53□□□□□ -1.68
SEC22A-201ENST00000309934 LINC00467Q9BRT7 94 aa4.53□□□□□ -1.68
SEC22A-201ENST00000309934 ZNF747Q9BV97 191 aa4.53□□□□□ -1.68
SEC22A-201ENST00000309934 CSPG4Q6UVK1 2322 aa4.52□□□□□ -1.69
SEC22A-201ENST00000309934 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.52□□□□□ -1.69
SEC22A-201ENST00000309934 LINC01548A6NM66 108 aa4.52□□□□□ -1.69
SEC22A-201ENST00000309934 F8W735 103 aaPredicted RBP4.52□□□□□ -1.69
SEC22A-201ENST00000309934 H3BT86 120 aa4.52□□□□□ -1.69
SEC22A-201ENST00000309934 CARD19Q96LW7 228 aa4.52□□□□□ -1.69
SEC22A-201ENST00000309934 C17orf77Q96MU5 243 aa4.52□□□□□ -1.69
SEC22A-201ENST00000309934 TTTY13Q9BZ97 58 aa4.52□□□□□ -1.69
SEC22A-201ENST00000309934 IMUPQ9GZP8 106 aa4.52□□□□□ -1.69
SEC22A-201ENST00000309934 HIGD1BQ9P298 99 aa4.52□□□□□ -1.69
SEC22A-201ENST00000309934 INAFM2P0DMQ5 153 aa4.52□□□□□ -1.69
SEC22A-201ENST00000309934 SLURP1P55000 103 aa4.52□□□□□ -1.69
SEC22A-201ENST00000309934 RPL36AP83881 106 aaKnown RBP4.52□□□□□ -1.69
SEC22A-201ENST00000309934 RHOHQ15669 191 aa4.52□□□□□ -1.69
SEC22A-201ENST00000309934 DEFB114Q30KQ6 69 aa4.52□□□□□ -1.69
SEC22A-201ENST00000309934 RPL36ALQ969Q0 106 aaKnown RBP4.52□□□□□ -1.69
SEC22A-201ENST00000309934 FRYQ5TBA9 3013 aa4.52□□□□□ -1.69
SEC22A-201ENST00000309934 A0A1B0GXF2 115 aa4.52□□□□□ -1.69
SEC22A-201ENST00000309934 UNQ9165/PRO28630Q6UXU0 137 aa4.52□□□□□ -1.69
SEC22A-201ENST00000309934 C2orf91Q6ZV80 131 aa4.52□□□□□ -1.69
SEC22A-201ENST00000309934 Q8N976 141 aa4.52□□□□□ -1.69
SEC22A-201ENST00000309934 LINC01006Q8NI28 216 aa4.52□□□□□ -1.69
SEC22A-201ENST00000309934 MDFICQ9P1T7 246 aa4.52□□□□□ -1.69
SEC22A-201ENST00000309934 IGHV4-4A0A075B6R2 117 aa4.51□□□□□ -1.69
SEC22A-201ENST00000309934 SERP2Q8N6R1 65 aa4.51□□□□□ -1.69
SEC22A-201ENST00000309934 PLEKHB2Q96CS7 222 aa4.51□□□□□ -1.69
SEC22A-201ENST00000309934 DSCAML1Q8TD84 2053 aa4.51□□□□□ -1.69
SEC22A-201ENST00000309934 TEX49A0A1B0GTD5 131 aa4.51□□□□□ -1.69
SEC22A-201ENST00000309934 D6R8Y8 96 aa4.51□□□□□ -1.69
SEC22A-201ENST00000309934 NHLRC4P0CG21 123 aaPredicted RBP4.51□□□□□ -1.69
SEC22A-201ENST00000309934 RASL10AQ92737 203 aa4.51□□□□□ -1.69
SEC22A-201ENST00000309934 SMAD5-AS1Q9Y6J3 95 aa4.51□□□□□ -1.69
SEC22A-201ENST00000309934 IGKV3D-7A0A0C4DH55 119 aa4.51□□□□□ -1.69
SEC22A-201ENST00000309934 IGKV3-20P01619 116 aa4.51□□□□□ -1.69
SEC22A-201ENST00000309934 ZFP2Q6ZN57 461 aa4.51□□□□□ -1.69
SEC22A-201ENST00000309934 SCGB3A1Q96QR1 104 aa4.51□□□□□ -1.69
SEC22A-201ENST00000309934 CNFNQ9BYD5 112 aa4.51□□□□□ -1.69
SEC22A-201ENST00000309934 HELZ2Q9BYK8 2649 aaKnown RBP4.51□□□□□ -1.69
SEC22A-201ENST00000309934 TRGV2A0A075B6R0 118 aa4.51□□□□□ -1.69
SEC22A-201ENST00000309934 A0A0B4J2C4 111 aa4.51□□□□□ -1.69
SEC22A-201ENST00000309934 FRMD6-AS1P0C7T7 363 aa4.51□□□□□ -1.69
SEC22A-201ENST00000309934 PLNP26678 52 aa4.51□□□□□ -1.69
SEC22A-201ENST00000309934 LINC01620Q4KN68 170 aa4.51□□□□□ -1.69
SEC22A-201ENST00000309934 SERP1Q9Y6X1 66 aa4.51□□□□□ -1.69
SEC22A-201ENST00000309934 IGLV2-11P01706 119 aa4.5□□□□□ -1.69
SEC22A-201ENST00000309934 NFE4Q86UQ8 179 aa4.5□□□□□ -1.69
SEC22A-201ENST00000309934 SPATA3Q8NHX4 192 aa4.5□□□□□ -1.69
SEC22A-201ENST00000309934 C2orf48Q96LS8 159 aa4.5□□□□□ -1.69
SEC22A-201ENST00000309934 MAP6D1Q9H9H5 199 aa4.5□□□□□ -1.69
SEC22A-201ENST00000309934 DKK2Q9UBU2 259 aa4.5□□□□□ -1.69
SEC22A-201ENST00000309934 SERTAD4-AS1Q5TG53 156 aa4.5□□□□□ -1.69
SEC22A-201ENST00000309934 JMJD1CQ15652 2540 aa4.5□□□□□ -1.69
SEC22A-201ENST00000309934 TCL1BO95988 128 aa4.5□□□□□ -1.69
SEC22A-201ENST00000309934 TRBV12-3P01733 135 aa4.5□□□□□ -1.69
SEC22A-201ENST00000309934 HTN1P15515 57 aa4.5□□□□□ -1.69
SEC22A-201ENST00000309934 SUMO2P61956 95 aaKnown RBP4.5□□□□□ -1.69
SEC22A-201ENST00000309934 MRPL51Q4U2R6 128 aaKnown RBP4.5□□□□□ -1.69
SEC22A-201ENST00000309934 FAM74A4Q5TZK3 123 aa4.5□□□□□ -1.69
SEC22A-201ENST00000309934 TP53TG1Q9Y2A0 90 aa4.5□□□□□ -1.69
SEC22A-201ENST00000309934 F8P00451 2351 aa4.5□□□□□ -1.69
SEC22A-201ENST00000309934 LAMA1P25391 3075 aa4.49□□□□□ -1.69
SEC22A-201ENST00000309934 KLLNB2CW77 178 aa4.49□□□□□ -1.69
SEC22A-201ENST00000309934 I3L3M4 83 aa4.49□□□□□ -1.69
SEC22A-201ENST00000309934 CD28P10747 220 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms