RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 ZMAT4Q9H898 229 aa15.87■□□□□ 0.13
IRF3-201ENST00000309877 DAZ3Q9NR90 486 aaKnown RBP15.87■□□□□ 0.13
IRF3-201ENST00000309877 CYSLTR1Q9Y271 337 aa15.87■□□□□ 0.13
IRF3-201ENST00000309877 C12orf74Q32Q52 190 aa15.86■□□□□ 0.13
IRF3-201ENST00000309877 LINC00518Q8N0U6 118 aa15.86■□□□□ 0.13
IRF3-201ENST00000309877 IFI27L1Q96BM0 104 aa15.86■□□□□ 0.13
IRF3-201ENST00000309877 F5H768 121 aa15.86■□□□□ 0.13
IRF3-201ENST00000309877 SYS1-DBNDD2H3BUS1 97 aa15.86■□□□□ 0.13
IRF3-201ENST00000309877 ATP5LO75964 103 aa15.86■□□□□ 0.13
IRF3-201ENST00000309877 HTN3P15516 51 aa15.86■□□□□ 0.13
IRF3-201ENST00000309877 SCGB3A1Q96QR1 104 aa15.86■□□□□ 0.13
IRF3-201ENST00000309877 LINC01549A6NIU2 74 aa15.85■□□□□ 0.13
IRF3-201ENST00000309877 H0Y8G0 127 aa15.85■□□□□ 0.13
IRF3-201ENST00000309877 PAX4O43316 350 aa15.85■□□□□ 0.13
IRF3-201ENST00000309877 C12orf57Q99622 126 aa15.85■□□□□ 0.13
IRF3-201ENST00000309877 GYPEP15421 78 aa15.84■□□□□ 0.13
IRF3-201ENST00000309877 PET117Q6UWS5 81 aa15.83■□□□□ 0.12
IRF3-201ENST00000309877 C20orf203Q8NBC4 194 aa15.83■□□□□ 0.12
IRF3-201ENST00000309877 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.82■□□□□ 0.12
IRF3-201ENST00000309877 RPL39P62891 51 aaKnown RBP15.82■□□□□ 0.12
IRF3-201ENST00000309877 A0A0J9YY99 117 aa15.81■□□□□ 0.12
IRF3-201ENST00000309877 C11orf45Q8TAV5 145 aa15.81■□□□□ 0.12
IRF3-201ENST00000309877 C20orf202A1L168 122 aa15.8■□□□□ 0.12
IRF3-201ENST00000309877 PRSS1P07477 247 aa15.8■□□□□ 0.12
IRF3-201ENST00000309877 ERASQ7Z444 233 aa15.8■□□□□ 0.12
IRF3-201ENST00000309877 TRAV26-1A0A087WT03 109 aa15.79■□□□□ 0.12
IRF3-201ENST00000309877 Q8N976 141 aa15.79■□□□□ 0.12
IRF3-201ENST00000309877 B9D2Q9BPU9 175 aa15.79■□□□□ 0.12
IRF3-201ENST00000309877 CHCHD7Q9BUK0 85 aa15.79■□□□□ 0.12
IRF3-201ENST00000309877 LINC00694P0DN24 101 aa15.79■□□□□ 0.12
IRF3-201ENST00000309877 Q6ZN92 141 aa15.79■□□□□ 0.12
IRF3-201ENST00000309877 SPATA12Q7Z6I5 190 aa15.79■□□□□ 0.12
IRF3-201ENST00000309877 VSIG2Q96IQ7 327 aa15.79■□□□□ 0.12
IRF3-201ENST00000309877 CDPF1Q6NVV7 123 aa15.78■□□□□ 0.12
IRF3-201ENST00000309877 Q6ZTC4 211 aa15.78■□□□□ 0.12
IRF3-201ENST00000309877 NANOS2P60321 138 aaKnown RBP15.77■□□□□ 0.12
IRF3-201ENST00000309877 ATP6V0E2Q8NHE4 81 aa15.77■□□□□ 0.12
IRF3-201ENST00000309877 GTSF1LQ9H1H1 148 aa15.77■□□□□ 0.12
IRF3-201ENST00000309877 TMEM141Q96I45 108 aa15.76■□□□□ 0.11
IRF3-201ENST00000309877 DNHD1Q96M86 4753 aa15.76■□□□□ 0.11
IRF3-201ENST00000309877 IGIPA6NJ69 53 aa15.76■□□□□ 0.11
IRF3-201ENST00000309877 NTM-AS1Q6ZSK4 140 aa15.76■□□□□ 0.11
IRF3-201ENST00000309877 TIMM17AQ99595 171 aa15.76■□□□□ 0.11
IRF3-201ENST00000309877 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.75■□□□□ 0.11
IRF3-201ENST00000309877 IGKV2-29A2NJV5 120 aaPredicted RBP15.75■□□□□ 0.11
IRF3-201ENST00000309877 TMEM97Q5BJF2 176 aa15.75■□□□□ 0.11
IRF3-201ENST00000309877 LINC01545Q5VT33 79 aa15.75■□□□□ 0.11
IRF3-201ENST00000309877 S100A12P80511 92 aa15.74■□□□□ 0.11
IRF3-201ENST00000309877 LGALS9CQ6DKI2 356 aa15.73■□□□□ 0.11
IRF3-201ENST00000309877 PMCHL2Q9BQD1 86 aa15.73■□□□□ 0.11
IRF3-201ENST00000309877 TRBV25-1A0A075B6N4 114 aa15.73■□□□□ 0.11
IRF3-201ENST00000309877 A0A096LPF7 62 aa15.72■□□□□ 0.11
IRF3-201ENST00000309877 MRPL23Q16540 153 aaKnown RBP15.72■□□□□ 0.11
IRF3-201ENST00000309877 TEX43Q6ZNM6 134 aa15.72■□□□□ 0.11
IRF3-201ENST00000309877 BAALCQ8WXS3 180 aa15.72■□□□□ 0.11
IRF3-201ENST00000309877 TMEM243Q9BU79 118 aa15.72■□□□□ 0.11
IRF3-201ENST00000309877 ICOSQ9Y6W8 199 aa15.72■□□□□ 0.11
IRF3-201ENST00000309877 DEFA6Q01524 100 aa15.71■□□□□ 0.11
IRF3-201ENST00000309877 ATOH7Q8N100 152 aa15.71■□□□□ 0.11
IRF3-201ENST00000309877 PYGO1Q9Y3Y4 419 aa15.71■□□□□ 0.11
IRF3-201ENST00000309877 TRBV6-8A0A0A6YYG3 113 aa15.7■□□□□ 0.1
IRF3-201ENST00000309877 SPANXA1Q9NS26 97 aa15.7■□□□□ 0.1
IRF3-201ENST00000309877 DEFB131BA0A096LNP1 70 aa15.7■□□□□ 0.1
IRF3-201ENST00000309877 TRAV12-1A0A0B4J245 112 aa15.7■□□□□ 0.1
IRF3-201ENST00000309877 UBE2L6O14933 153 aa15.7■□□□□ 0.1
IRF3-201ENST00000309877 ODF1Q14990 250 aa15.7■□□□□ 0.1
IRF3-201ENST00000309877 SH2D6Q7Z4S9 175 aa15.7■□□□□ 0.1
IRF3-201ENST00000309877 UBE2D4Q9Y2X8 147 aa15.7■□□□□ 0.1
IRF3-201ENST00000309877 A0A087WX48 190 aa15.69■□□□□ 0.1
IRF3-201ENST00000309877 TENM3Q9P273 2699 aa15.68■□□□□ 0.1
IRF3-201ENST00000309877 SMAGPQ0VAQ4 97 aa15.68■□□□□ 0.1
IRF3-201ENST00000309877 PAPPA-AS1Q5QFB9 102 aa15.68■□□□□ 0.1
IRF3-201ENST00000309877 CEMP1Q6PRD7 247 aaPredicted RBP15.68■□□□□ 0.1
IRF3-201ENST00000309877 OPRPNQ99935 248 aaPredicted RBP15.68■□□□□ 0.1
IRF3-201ENST00000309877 VAMP8Q9BV40 100 aa15.68■□□□□ 0.1
IRF3-201ENST00000309877 H3BNG1 76 aa15.67■□□□□ 0.1
IRF3-201ENST00000309877 NHLRC4P0CG21 123 aaPredicted RBP15.67■□□□□ 0.1
IRF3-201ENST00000309877 PMVKQ15126 192 aa15.67■□□□□ 0.1
IRF3-201ENST00000309877 DGAT2L7PQ6IED9 249 aa15.67■□□□□ 0.1
IRF3-201ENST00000309877 IGLV4-3A0A075B6K6 122 aa15.67■□□□□ 0.1
IRF3-201ENST00000309877 PRSS29PA6NIE9 313 aa15.67■□□□□ 0.1
IRF3-201ENST00000309877 NPSP0C0P6 89 aa15.67■□□□□ 0.1
IRF3-201ENST00000309877 TIMM21Q9BVV7 248 aa15.67■□□□□ 0.1
IRF3-201ENST00000309877 TRAV10A0A0B4J240 114 aa15.66■□□□□ 0.1
IRF3-201ENST00000309877 H7C423 109 aa15.66■□□□□ 0.1
IRF3-201ENST00000309877 FGF6P10767 208 aa15.66■□□□□ 0.1
IRF3-201ENST00000309877 CHCHD5Q9BSY4 110 aa15.66■□□□□ 0.1
IRF3-201ENST00000309877 VCX2Q9H322 139 aa15.66■□□□□ 0.1
IRF3-201ENST00000309877 CHTOPQ9Y3Y2 248 aaKnown RBP15.66■□□□□ 0.1
IRF3-201ENST00000309877 AMMECR1LQ6DCA0 310 aa15.65■□□□□ 0.1
IRF3-201ENST00000309877 CST9LQ9H4G1 147 aa15.65■□□□□ 0.1
IRF3-201ENST00000309877 MRPL35Q9NZE8 188 aaKnown RBP15.65■□□□□ 0.1
IRF3-201ENST00000309877 HUWE1Q7Z6Z7 4374 aaKnown RBP15.64■□□□□ 0.09
IRF3-201ENST00000309877 ZC2HC1BQ5TFG8 222 aa15.64■□□□□ 0.09
IRF3-201ENST00000309877 TRAV9-2A0A087WT02 112 aa15.63■□□□□ 0.09
IRF3-201ENST00000309877 DPM2O94777 84 aa15.63■□□□□ 0.09
IRF3-201ENST00000309877 GAGE6Q13070 117 aa15.63■□□□□ 0.09
IRF3-201ENST00000309877 MRPL52Q86TS9 123 aaKnown RBP15.63■□□□□ 0.09
IRF3-201ENST00000309877 PAM16Q9Y3D7 125 aa15.63■□□□□ 0.09
IRF3-201ENST00000309877 F8VRH5 84 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms