RNA–Protein interactions for RNA: ENST00000307301.11

MRPL39-201, Transcript of mitochondrial ribosomal protein L39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MRPL39, Length 1,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL39-201ENST00000307301 C1orf43Q9BWL3 253 aa13.74□□□□□ -0.21
MRPL39-201ENST00000307301 HSPG2P98160 4391 aa13.73□□□□□ -0.21
MRPL39-201ENST00000307301 AMTP48728 403 aa13.73□□□□□ -0.21
MRPL39-201ENST00000307301 CLPSL2Q6UWE3 100 aa13.73□□□□□ -0.21
MRPL39-201ENST00000307301 TMEM191AQ9H0A3 160 aa13.73□□□□□ -0.21
MRPL39-201ENST00000307301 GAS8-AS1O95177 125 aa13.72□□□□□ -0.21
MRPL39-201ENST00000307301 LINC00269Q8N2A0 174 aa13.72□□□□□ -0.21
MRPL39-201ENST00000307301 RNF185Q96GF1 192 aa13.72□□□□□ -0.21
MRPL39-201ENST00000307301 KRTAP4-5Q9BYR2 181 aa13.72□□□□□ -0.21
MRPL39-201ENST00000307301 PRR34Q9NV39 138 aa13.72□□□□□ -0.21
MRPL39-201ENST00000307301 NAT8BQ9UHF3 227 aa13.72□□□□□ -0.21
MRPL39-201ENST00000307301 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.71□□□□□ -0.21
MRPL39-201ENST00000307301 RIGQ13278 110 aa13.71□□□□□ -0.21
MRPL39-201ENST00000307301 MIAQ16674 131 aa13.71□□□□□ -0.21
MRPL39-201ENST00000307301 APOBP04114 4563 aaKnown RBP13.71□□□□□ -0.21
MRPL39-201ENST00000307301 SDHAF1A6NFY7 115 aa13.7□□□□□ -0.22
MRPL39-201ENST00000307301 RAB4AP20338 218 aa13.7□□□□□ -0.22
MRPL39-201ENST00000307301 XGP55808 180 aa13.7□□□□□ -0.22
MRPL39-201ENST00000307301 RAB14P61106 215 aa13.7□□□□□ -0.22
MRPL39-201ENST00000307301 AMN1Q8IY45 258 aa13.7□□□□□ -0.22
MRPL39-201ENST00000307301 C20orf203Q8NBC4 194 aa13.7□□□□□ -0.22
MRPL39-201ENST00000307301 IGLV4-60A0A075B6I1 120 aa13.69□□□□□ -0.22
MRPL39-201ENST00000307301 SMIM27A0A1W2PRY6 76 aa13.69□□□□□ -0.22
MRPL39-201ENST00000307301 UBE2L6O14933 153 aa13.69□□□□□ -0.22
MRPL39-201ENST00000307301 TRBV6-5A0A0K0K1A5 114 aa13.68□□□□□ -0.22
MRPL39-201ENST00000307301 A0A1B0GUV1 79 aa13.68□□□□□ -0.22
MRPL39-201ENST00000307301 Q8N1X5 172 aa13.68□□□□□ -0.22
MRPL39-201ENST00000307301 NCR2O95944 276 aa13.67□□□□□ -0.22
MRPL39-201ENST00000307301 HLA-DQA1P01909 254 aa13.67□□□□□ -0.22
MRPL39-201ENST00000307301 REG3AQ06141 175 aa13.67□□□□□ -0.22
MRPL39-201ENST00000307301 MRAP2Q96G30 205 aa13.67□□□□□ -0.22
MRPL39-201ENST00000307301 RPS10P46783 165 aaKnown RBP13.66□□□□□ -0.22
MRPL39-201ENST00000307301 ST20Q9HBF5 79 aa13.66□□□□□ -0.22
MRPL39-201ENST00000307301 SMKR1H3BMG3 65 aa13.65□□□□□ -0.22
MRPL39-201ENST00000307301 I3L3M4 83 aa13.65□□□□□ -0.22
MRPL39-201ENST00000307301 APCSP02743 223 aa13.65□□□□□ -0.22
MRPL39-201ENST00000307301 PMCHP20382 165 aa13.65□□□□□ -0.22
MRPL39-201ENST00000307301 KRTAP26-1Q6PEX3 210 aa13.65□□□□□ -0.22
MRPL39-201ENST00000307301 IGLV10-54A0A075B6I4 117 aa13.64□□□□□ -0.23
MRPL39-201ENST00000307301 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.64□□□□□ -0.23
MRPL39-201ENST00000307301 IGKV2-29A2NJV5 120 aaPredicted RBP13.64□□□□□ -0.23
MRPL39-201ENST00000307301 TMEM70Q9BUB7 260 aa13.64□□□□□ -0.23
MRPL39-201ENST00000307301 PCLOQ9Y6V0 5065 aa13.63□□□□□ -0.23
MRPL39-201ENST00000307301 CAMPP49913 170 aa13.63□□□□□ -0.23
MRPL39-201ENST00000307301 HAMPP81172 84 aa13.63□□□□□ -0.23
MRPL39-201ENST00000307301 CLLU1Q5K131 121 aa13.63□□□□□ -0.23
MRPL39-201ENST00000307301 USP17L23D6RBM5 183 aa13.62□□□□□ -0.23
MRPL39-201ENST00000307301 TSHBP01222 138 aa13.62□□□□□ -0.23
MRPL39-201ENST00000307301 POLR2KP53803 58 aaKnown RBP13.62□□□□□ -0.23
MRPL39-201ENST00000307301 TMEM242Q9NWH2 141 aa13.62□□□□□ -0.23
MRPL39-201ENST00000307301 FAM30AQ9NZY2 134 aa13.62□□□□□ -0.23
MRPL39-201ENST00000307301 IFITM2Q01629 132 aa13.61□□□□□ -0.23
MRPL39-201ENST00000307301 LINC01620Q4KN68 170 aa13.61□□□□□ -0.23
MRPL39-201ENST00000307301 MRPL51Q4U2R6 128 aaKnown RBP13.61□□□□□ -0.23
MRPL39-201ENST00000307301 C14orf177Q52M58 125 aa13.61□□□□□ -0.23
MRPL39-201ENST00000307301 FAM104BQ5XKR9 115 aa13.61□□□□□ -0.23
MRPL39-201ENST00000307301 AMMECR1LQ6DCA0 310 aa13.61□□□□□ -0.23
MRPL39-201ENST00000307301 MRPL54Q6P161 138 aaKnown RBP13.61□□□□□ -0.23
MRPL39-201ENST00000307301 TRAV8-4A0A0B4J246 113 aa13.6□□□□□ -0.23
MRPL39-201ENST00000307301 A0A1B0GW15 77 aa13.6□□□□□ -0.23
MRPL39-201ENST00000307301 H7C423 109 aa13.6□□□□□ -0.23
MRPL39-201ENST00000307301 RNASEKQ6P5S7 137 aaKnown RBP13.6□□□□□ -0.23
MRPL39-201ENST00000307301 NRACQ8N912 160 aa13.6□□□□□ -0.23
MRPL39-201ENST00000307301 TRBV27A0A0K0K1C4 114 aa13.59□□□□□ -0.23
MRPL39-201ENST00000307301 FGF6P10767 208 aa13.59□□□□□ -0.23
MRPL39-201ENST00000307301 A0A1B0GXF2 115 aa13.58□□□□□ -0.24
MRPL39-201ENST00000307301 ESDP10768 282 aa13.58□□□□□ -0.24
MRPL39-201ENST00000307301 HBBP68871 147 aa13.58□□□□□ -0.24
MRPL39-201ENST00000307301 IGKV3OR2-268A0A0C4DH90 116 aa13.57□□□□□ -0.24
MRPL39-201ENST00000307301 PPP1R2P9O14990 202 aa13.57□□□□□ -0.24
MRPL39-201ENST00000307301 PPP1R17O96001 155 aa13.57□□□□□ -0.24
MRPL39-201ENST00000307301 PRSS1P07477 247 aa13.57□□□□□ -0.24
MRPL39-201ENST00000307301 SUMO2P61956 95 aaKnown RBP13.57□□□□□ -0.24
MRPL39-201ENST00000307301 PNRC1Q12796 327 aaPredicted RBP13.57□□□□□ -0.24
MRPL39-201ENST00000307301 SMR3BP02814 79 aaPredicted RBP13.56□□□□□ -0.24
MRPL39-201ENST00000307301 Q6ZSA8 131 aa13.56□□□□□ -0.24
MRPL39-201ENST00000307301 EPM2AB3EWF7 344 aa13.55□□□□□ -0.24
MRPL39-201ENST00000307301 VCYO14598 125 aa13.55□□□□□ -0.24
MRPL39-201ENST00000307301 S100A8P05109 93 aa13.55□□□□□ -0.24
MRPL39-201ENST00000307301 ZNF25P17030 456 aaPredicted RBP13.55□□□□□ -0.24
MRPL39-201ENST00000307301 LINC00862A6NCI5 91 aa13.54□□□□□ -0.24
MRPL39-201ENST00000307301 F8W036 122 aa13.54□□□□□ -0.24
MRPL39-201ENST00000307301 CKS2P33552 79 aa13.54□□□□□ -0.24
MRPL39-201ENST00000307301 ABCA13Q86UQ4 5058 aa13.54□□□□□ -0.24
MRPL39-201ENST00000307301 MT-ND4LP03901 98 aa13.53□□□□□ -0.24
MRPL39-201ENST00000307301 FCER1GP30273 86 aa13.53□□□□□ -0.24
MRPL39-201ENST00000307301 ANAPC16Q96DE5 110 aa13.53□□□□□ -0.24
MRPL39-201ENST00000307301 TMEM101Q96IK0 257 aa13.53□□□□□ -0.24
MRPL39-201ENST00000307301 BTF3L4Q96K17 158 aa13.53□□□□□ -0.24
MRPL39-201ENST00000307301 C7orf77A4D0Y5 90 aa13.52□□□□□ -0.25
MRPL39-201ENST00000307301 GAGE12HA6NDE8 117 aa13.52□□□□□ -0.25
MRPL39-201ENST00000307301 ATP5L2Q7Z4Y8 100 aa13.52□□□□□ -0.25
MRPL39-201ENST00000307301 TRBV24-1A0A075B6N3 115 aa13.51□□□□□ -0.25
MRPL39-201ENST00000307301 D6R8Y8 96 aa13.51□□□□□ -0.25
MRPL39-201ENST00000307301 TNFRSF6BO95407 300 aa13.51□□□□□ -0.25
MRPL39-201ENST00000307301 Q5VSD8 79 aa13.51□□□□□ -0.25
MRPL39-201ENST00000307301 MRPL52Q86TS9 123 aaKnown RBP13.51□□□□□ -0.25
MRPL39-201ENST00000307301 OR5A1Q8NGJ0 315 aa13.51□□□□□ -0.25
MRPL39-201ENST00000307301 KIR2DL4Q99706 377 aa13.51□□□□□ -0.25
MRPL39-201ENST00000307301 C20orf78Q9BR46 151 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms