RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 C1orf158Q8N1D5 194 aa9.6□□□□□ -0.87
USP38-201ENST00000307017 LY6G6CO95867 125 aa9.6□□□□□ -0.87
USP38-201ENST00000307017 Q8N7P7 452 aa9.6□□□□□ -0.87
USP38-201ENST00000307017 RPL37AP8A6NKH3 93 aa9.6□□□□□ -0.87
USP38-201ENST00000307017 CCDC179H3BU77 68 aa9.6□□□□□ -0.87
USP38-201ENST00000307017 C1orf229Q6ZS94 237 aaPredicted RBP9.6□□□□□ -0.87
USP38-201ENST00000307017 NCOR1P1Q9H4R4 102 aa9.6□□□□□ -0.87
USP38-201ENST00000307017 C9orf66Q5T8R8 295 aa9.59□□□□□ -0.87
USP38-201ENST00000307017 PRYO14603 147 aa9.59□□□□□ -0.87
USP38-201ENST00000307017 A0A0J9YXY3 114 aa9.59□□□□□ -0.87
USP38-201ENST00000307017 FAM19A1Q7Z5A9 133 aa9.59□□□□□ -0.87
USP38-201ENST00000307017 IGHV1-58A0A0C4DH39 117 aa9.58□□□□□ -0.88
USP38-201ENST00000307017 DEFB113Q30KQ7 82 aa9.58□□□□□ -0.88
USP38-201ENST00000307017 EP300Q09472 2414 aaPredicted RBP9.58□□□□□ -0.88
USP38-201ENST00000307017 FREM1Q5H8C1 2179 aa9.58□□□□□ -0.88
USP38-201ENST00000307017 LOC100131303A0A0U1RQF7 123 aa9.58□□□□□ -0.88
USP38-201ENST00000307017 COX7BP24311 80 aa9.58□□□□□ -0.88
USP38-201ENST00000307017 MED13LQ71F56 2210 aa9.58□□□□□ -0.88
USP38-201ENST00000307017 WFDC13Q8IUB5 93 aa9.57□□□□□ -0.88
USP38-201ENST00000307017 A0A087WZ39 114 aa9.57□□□□□ -0.88
USP38-201ENST00000307017 BPY2O14599 106 aa9.57□□□□□ -0.88
USP38-201ENST00000307017 PLXNB1O43157 2135 aa9.57□□□□□ -0.88
USP38-201ENST00000307017 MSMPQ1L6U9 139 aa9.57□□□□□ -0.88
USP38-201ENST00000307017 WFDC10AQ9H1F0 79 aa9.57□□□□□ -0.88
USP38-201ENST00000307017 B9D2Q9BPU9 175 aa9.56□□□□□ -0.88
USP38-201ENST00000307017 TMEM256-PLSCR3K7ERE1 68 aa9.56□□□□□ -0.88
USP38-201ENST00000307017 CXCL5P42830 114 aa9.56□□□□□ -0.88
USP38-201ENST00000307017 ADORA2A-AS1P86434 159 aa9.56□□□□□ -0.88
USP38-201ENST00000307017 TMEM190Q8WZ59 177 aa9.56□□□□□ -0.88
USP38-201ENST00000307017 H0YGX0 51 aa9.56□□□□□ -0.88
USP38-201ENST00000307017 INSL3P51460 131 aa9.56□□□□□ -0.88
USP38-201ENST00000307017 TRBV6-1A0A0K0K1D8 114 aa9.56□□□□□ -0.88
USP38-201ENST00000307017 C18orf65Q6ZTR6 163 aa9.55□□□□□ -0.88
USP38-201ENST00000307017 MALRD1Q5VYJ5 2156 aa9.55□□□□□ -0.88
USP38-201ENST00000307017 TRIAP1O43715 76 aa9.55□□□□□ -0.88
USP38-201ENST00000307017 MIAQ16674 131 aa9.55□□□□□ -0.88
USP38-201ENST00000307017 MRPS12O15235 138 aaKnown RBP9.54□□□□□ -0.88
USP38-201ENST00000307017 MAP6D1Q9H9H5 199 aa9.54□□□□□ -0.88
USP38-201ENST00000307017 IGLV9-49A0A0B4J1Y8 123 aa9.54□□□□□ -0.88
USP38-201ENST00000307017 GAS8-AS1O95177 125 aa9.54□□□□□ -0.88
USP38-201ENST00000307017 Q6ZSV7 163 aa9.54□□□□□ -0.88
USP38-201ENST00000307017 Q8N976 141 aa9.54□□□□□ -0.88
USP38-201ENST00000307017 J3QLI3 93 aa9.54□□□□□ -0.88
USP38-201ENST00000307017 CDKN2A-AS1Q9UH64 79 aa9.53□□□□□ -0.88
USP38-201ENST00000307017 SPANXB1Q9NS25 103 aaPredicted RBP9.53□□□□□ -0.88
USP38-201ENST00000307017 REG3AQ06141 175 aa9.53□□□□□ -0.88
USP38-201ENST00000307017 SERP1Q9Y6X1 66 aa9.53□□□□□ -0.88
USP38-201ENST00000307017 SOSTDC1Q6X4U4 206 aa9.52□□□□□ -0.89
USP38-201ENST00000307017 ZFAND2AQ8N6M9 145 aa9.52□□□□□ -0.89
USP38-201ENST00000307017 CCDC140Q96MF4 163 aa9.52□□□□□ -0.89
USP38-201ENST00000307017 TANC1Q9C0D5 1861 aa9.52□□□□□ -0.89
USP38-201ENST00000307017 ACACAQ13085 2346 aa9.52□□□□□ -0.89
USP38-201ENST00000307017 CELA1Q9UNI1 258 aa9.51□□□□□ -0.89
USP38-201ENST00000307017 CHCHD10Q8WYQ3 142 aaPredicted RBP9.51□□□□□ -0.89
USP38-201ENST00000307017 DNAJC9-AS1A6NH13 148 aa9.51□□□□□ -0.89
USP38-201ENST00000307017 SPTAN1Q13813 2472 aaKnown RBP9.51□□□□□ -0.89
USP38-201ENST00000307017 EDN2P20800 178 aa9.5□□□□□ -0.89
USP38-201ENST00000307017 EML5Q05BV3 1969 aa9.5□□□□□ -0.89
USP38-201ENST00000307017 IGLV2-8P01709 118 aa9.5□□□□□ -0.89
USP38-201ENST00000307017 CRYGDP07320 174 aa9.5□□□□□ -0.89
USP38-201ENST00000307017 LINC00694P0DN24 101 aa9.5□□□□□ -0.89
USP38-201ENST00000307017 CLUHP3Q96NS8 147 aa9.5□□□□□ -0.89
USP38-201ENST00000307017 CRIP1P50238 77 aa9.5□□□□□ -0.89
USP38-201ENST00000307017 UBE2D2P62837 147 aa9.5□□□□□ -0.89
USP38-201ENST00000307017 FAM222AQ5U5X8 452 aa9.5□□□□□ -0.89
USP38-201ENST00000307017 KAAG1Q9UBP8 84 aa9.5□□□□□ -0.89
USP38-201ENST00000307017 CTRLP40313 264 aa9.5□□□□□ -0.89
USP38-201ENST00000307017 ALPK3Q96L96 1907 aa9.5□□□□□ -0.89
USP38-201ENST00000307017 A0A1W2PNU3 283 aaPredicted RBP9.49□□□□□ -0.89
USP38-201ENST00000307017 IGFL3Q6UXB1 125 aa9.49□□□□□ -0.89
USP38-201ENST00000307017 Q6ZPA2 131 aa9.49□□□□□ -0.89
USP38-201ENST00000307017 MRPL55Q7Z7F7 128 aaKnown RBP9.49□□□□□ -0.89
USP38-201ENST00000307017 C4orf3Q8WVX3 66 aa9.49□□□□□ -0.89
USP38-201ENST00000307017 TRBV10-1A0A0K0K1A3 114 aa9.49□□□□□ -0.89
USP38-201ENST00000307017 NDUFA7O95182 113 aa9.49□□□□□ -0.89
USP38-201ENST00000307017 PRR15LQ9BU68 103 aa9.49□□□□□ -0.89
USP38-201ENST00000307017 C19orf84I3L1E1 186 aa9.49□□□□□ -0.89
USP38-201ENST00000307017 KIR2DL5BQ8NHK3 375 aa9.48□□□□□ -0.89
USP38-201ENST00000307017 EXPH5Q8NEV8 1989 aa9.48□□□□□ -0.89
USP38-201ENST00000307017 JMJD7-PLA2G4BH0Y9G9 81 aa9.48□□□□□ -0.89
USP38-201ENST00000307017 Q6ZS46 218 aa9.48□□□□□ -0.89
USP38-201ENST00000307017 C19orf71A6NCJ1 209 aa9.48□□□□□ -0.89
USP38-201ENST00000307017 A6NED7 52 aa9.48□□□□□ -0.89
USP38-201ENST00000307017 NEXN-AS1Q8NBZ9 246 aa9.48□□□□□ -0.89
USP38-201ENST00000307017 C20orf203Q8NBC4 194 aa9.48□□□□□ -0.89
USP38-201ENST00000307017 H3BUA1 57 aa9.47□□□□□ -0.89
USP38-201ENST00000307017 DEFB116Q30KQ4 102 aa9.47□□□□□ -0.89
USP38-201ENST00000307017 C11orf45Q8TAV5 145 aa9.47□□□□□ -0.89
USP38-201ENST00000307017 HIGD1BQ9P298 99 aa9.47□□□□□ -0.89
USP38-201ENST00000307017 NBASA2RRP1 2371 aa9.47□□□□□ -0.89
USP38-201ENST00000307017 SERP2Q8N6R1 65 aa9.47□□□□□ -0.89
USP38-201ENST00000307017 TMEM223A0PJW6 202 aa9.46□□□□□ -0.89
USP38-201ENST00000307017 Q6ZVQ6 151 aa9.46□□□□□ -0.89
USP38-201ENST00000307017 SMAD5-AS1Q9Y6J3 95 aa9.46□□□□□ -0.89
USP38-201ENST00000307017 A0A0J9YX75 114 aa9.46□□□□□ -0.89
USP38-201ENST00000307017 CRIP2P52943 208 aaPredicted RBP9.46□□□□□ -0.89
USP38-201ENST00000307017 PLA2G2CQ5R387 149 aa9.46□□□□□ -0.89
USP38-201ENST00000307017 PRR3P79522 188 aaKnown RBP9.46□□□□□ -0.9
USP38-201ENST00000307017 C9orf85Q96MD7 179 aa9.46□□□□□ -0.9
USP38-201ENST00000307017 SPINK1P00995 79 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms