RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 MRAPQ8TCY5 172 aa12.37□□□□□ -0.43
KRT28-201ENST00000306658 TM2D3Q9BRN9 247 aa12.37□□□□□ -0.43
KRT28-201ENST00000306658 UBE2D3P61077 147 aa12.36□□□□□ -0.43
KRT28-201ENST00000306658 UBE2D2P62837 147 aa12.36□□□□□ -0.43
KRT28-201ENST00000306658 SPATA12Q7Z6I5 190 aa12.36□□□□□ -0.43
KRT28-201ENST00000306658 PHLDA1Q8WV24 401 aaPredicted RBP12.36□□□□□ -0.43
KRT28-201ENST00000306658 SCGB3A1Q96QR1 104 aa12.36□□□□□ -0.43
KRT28-201ENST00000306658 C20orf202A1L168 122 aa12.35□□□□□ -0.43
KRT28-201ENST00000306658 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.35□□□□□ -0.43
KRT28-201ENST00000306658 CRYBA4P53673 196 aa12.35□□□□□ -0.43
KRT28-201ENST00000306658 IGHV3-38A0A0C4DH36 116 aa12.35□□□□□ -0.43
KRT28-201ENST00000306658 H0Y8G0 127 aa12.35□□□□□ -0.43
KRT28-201ENST00000306658 ERASQ7Z444 233 aa12.34□□□□□ -0.43
KRT28-201ENST00000306658 Q8N976 141 aa12.34□□□□□ -0.43
KRT28-201ENST00000306658 C20orf203Q8NBC4 194 aa12.34□□□□□ -0.43
KRT28-201ENST00000306658 LOC100131303A0A0U1RQF7 123 aa12.33□□□□□ -0.44
KRT28-201ENST00000306658 PAX4O43316 350 aa12.33□□□□□ -0.44
KRT28-201ENST00000306658 PRSS1P07477 247 aa12.33□□□□□ -0.44
KRT28-201ENST00000306658 S100A12P80511 92 aa12.33□□□□□ -0.44
KRT28-201ENST00000306658 A0A0J9YWU9 116 aa12.32□□□□□ -0.44
KRT28-201ENST00000306658 RPL39P62891 51 aaKnown RBP12.32□□□□□ -0.44
KRT28-201ENST00000306658 Q6ZN92 141 aa12.32□□□□□ -0.44
KRT28-201ENST00000306658 ZMAT4Q9H898 229 aa12.32□□□□□ -0.44
KRT28-201ENST00000306658 F5H768 121 aa12.32□□□□□ -0.44
KRT28-201ENST00000306658 GYPEP15421 78 aa12.32□□□□□ -0.44
KRT28-201ENST00000306658 C12orf74Q32Q52 190 aa12.32□□□□□ -0.44
KRT28-201ENST00000306658 CDPF1Q6NVV7 123 aa12.32□□□□□ -0.44
KRT28-201ENST00000306658 LINC01545Q5VT33 79 aa12.31□□□□□ -0.44
KRT28-201ENST00000306658 TMEM141Q96I45 108 aa12.31□□□□□ -0.44
KRT28-201ENST00000306658 LINC00694P0DN24 101 aa12.3□□□□□ -0.44
KRT28-201ENST00000306658 HTN3P15516 51 aa12.3□□□□□ -0.44
KRT28-201ENST00000306658 LGALS9CQ6DKI2 356 aa12.3□□□□□ -0.44
KRT28-201ENST00000306658 TIMM17AQ99595 171 aa12.3□□□□□ -0.44
KRT28-201ENST00000306658 CHCHD7Q9BUK0 85 aa12.3□□□□□ -0.44
KRT28-201ENST00000306658 GTSF1LQ9H1H1 148 aa12.3□□□□□ -0.44
KRT28-201ENST00000306658 IGIPA6NJ69 53 aa12.29□□□□□ -0.44
KRT28-201ENST00000306658 TEX43Q6ZNM6 134 aa12.29□□□□□ -0.44
KRT28-201ENST00000306658 TMEM97Q5BJF2 176 aa12.29□□□□□ -0.44
KRT28-201ENST00000306658 C11orf45Q8TAV5 145 aa12.29□□□□□ -0.44
KRT28-201ENST00000306658 TENM3Q9P273 2699 aa12.28□□□□□ -0.44
KRT28-201ENST00000306658 ATP6V0E2Q8NHE4 81 aa12.28□□□□□ -0.44
KRT28-201ENST00000306658 VSIG2Q96IQ7 327 aa12.28□□□□□ -0.44
KRT28-201ENST00000306658 TRAV26-1A0A087WT03 109 aa12.27□□□□□ -0.45
KRT28-201ENST00000306658 A0A0J9YY99 117 aa12.27□□□□□ -0.45
KRT28-201ENST00000306658 NTM-AS1Q6ZSK4 140 aa12.27□□□□□ -0.45
KRT28-201ENST00000306658 PYGO1Q9Y3Y4 419 aa12.27□□□□□ -0.45
KRT28-201ENST00000306658 TRAV12-1A0A0B4J245 112 aa12.26□□□□□ -0.45
KRT28-201ENST00000306658 BAALCQ8WXS3 180 aa12.26□□□□□ -0.45
KRT28-201ENST00000306658 B9D2Q9BPU9 175 aa12.26□□□□□ -0.45
KRT28-201ENST00000306658 TRBV25-1A0A075B6N4 114 aa12.26□□□□□ -0.45
KRT28-201ENST00000306658 PAPPA-AS1Q5QFB9 102 aa12.26□□□□□ -0.45
KRT28-201ENST00000306658 ATOH7Q8N100 152 aa12.26□□□□□ -0.45
KRT28-201ENST00000306658 PMCHL2Q9BQD1 86 aa12.26□□□□□ -0.45
KRT28-201ENST00000306658 VAMP8Q9BV40 100 aa12.26□□□□□ -0.45
KRT28-201ENST00000306658 SPANXA1Q9NS26 97 aa12.26□□□□□ -0.45
KRT28-201ENST00000306658 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.25□□□□□ -0.45
KRT28-201ENST00000306658 A0A087WX48 190 aa12.25□□□□□ -0.45
KRT28-201ENST00000306658 IGKV2-29A2NJV5 120 aaPredicted RBP12.25□□□□□ -0.45
KRT28-201ENST00000306658 NPSP0C0P6 89 aa12.25□□□□□ -0.45
KRT28-201ENST00000306658 SMAGPQ0VAQ4 97 aa12.25□□□□□ -0.45
KRT28-201ENST00000306658 ODF1Q14990 250 aa12.25□□□□□ -0.45
KRT28-201ENST00000306658 MRPL23Q16540 153 aaKnown RBP12.25□□□□□ -0.45
KRT28-201ENST00000306658 Q6ZTC4 211 aa12.25□□□□□ -0.45
KRT28-201ENST00000306658 TRBV6-8A0A0A6YYG3 113 aa12.24□□□□□ -0.45
KRT28-201ENST00000306658 TMEM243Q9BU79 118 aa12.24□□□□□ -0.45
KRT28-201ENST00000306658 NANOS2P60321 138 aaKnown RBP12.23□□□□□ -0.45
KRT28-201ENST00000306658 PMVKQ15126 192 aa12.23□□□□□ -0.45
KRT28-201ENST00000306658 SH2D6Q7Z4S9 175 aa12.23□□□□□ -0.45
KRT28-201ENST00000306658 TIMM21Q9BVV7 248 aa12.23□□□□□ -0.45
KRT28-201ENST00000306658 UBE2D4Q9Y2X8 147 aa12.23□□□□□ -0.45
KRT28-201ENST00000306658 ICOSQ9Y6W8 199 aa12.23□□□□□ -0.45
KRT28-201ENST00000306658 DNHD1Q96M86 4753 aa12.23□□□□□ -0.45
KRT28-201ENST00000306658 TRAV9-2A0A087WT02 112 aa12.22□□□□□ -0.45
KRT28-201ENST00000306658 H7C423 109 aa12.22□□□□□ -0.45
KRT28-201ENST00000306658 UBE2L6O14933 153 aa12.22□□□□□ -0.45
KRT28-201ENST00000306658 PRSS29PA6NIE9 313 aa12.22□□□□□ -0.45
KRT28-201ENST00000306658 H3BNG1 76 aa12.22□□□□□ -0.45
KRT28-201ENST00000306658 DGAT2L7PQ6IED9 249 aa12.22□□□□□ -0.45
KRT28-201ENST00000306658 VCX2Q9H322 139 aa12.22□□□□□ -0.45
KRT28-201ENST00000306658 CHTOPQ9Y3Y2 248 aaKnown RBP12.22□□□□□ -0.45
KRT28-201ENST00000306658 IGLV4-3A0A075B6K6 122 aa12.21□□□□□ -0.45
KRT28-201ENST00000306658 HSBP1L1C9JCN9 74 aa12.21□□□□□ -0.45
KRT28-201ENST00000306658 ZNF664Q8N3J9 261 aa12.21□□□□□ -0.45
KRT28-201ENST00000306658 OPRPNQ99935 248 aaPredicted RBP12.21□□□□□ -0.45
KRT28-201ENST00000306658 CST9LQ9H4G1 147 aa12.21□□□□□ -0.45
KRT28-201ENST00000306658 MRPL35Q9NZE8 188 aaKnown RBP12.21□□□□□ -0.45
KRT28-201ENST00000306658 PAM16Q9Y3D7 125 aa12.21□□□□□ -0.45
KRT28-201ENST00000306658 A0A096LPF7 62 aa12.2□□□□□ -0.46
KRT28-201ENST00000306658 F8VRH5 84 aa12.2□□□□□ -0.46
KRT28-201ENST00000306658 DPM2O94777 84 aa12.2□□□□□ -0.46
KRT28-201ENST00000306658 IGKCP01834 107 aa12.2□□□□□ -0.46
KRT28-201ENST00000306658 CEMP1Q6PRD7 247 aaPredicted RBP12.2□□□□□ -0.46
KRT28-201ENST00000306658 MRPL52Q86TS9 123 aaKnown RBP12.2□□□□□ -0.46
KRT28-201ENST00000306658 CSDC2Q9Y534 153 aaKnown RBP12.2□□□□□ -0.46
KRT28-201ENST00000306658 DEFB131BA0A096LNP1 70 aa12.19□□□□□ -0.46
KRT28-201ENST00000306658 FGF6P10767 208 aa12.19□□□□□ -0.46
KRT28-201ENST00000306658 PLNP26678 52 aa12.19□□□□□ -0.46
KRT28-201ENST00000306658 AMMECR1LQ6DCA0 310 aa12.19□□□□□ -0.46
KRT28-201ENST00000306658 MRPS36P82909 103 aaKnown RBP12.19□□□□□ -0.46
KRT28-201ENST00000306658 SPATA45Q537H7 98 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms