RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 C9orf85Q96MD7 179 aa8.03□□□□□ -1.12
ZNF558-201ENST00000301475 TNFRSF18Q9Y5U5 241 aa8.03□□□□□ -1.12
ZNF558-201ENST00000301475 IGHV3-16A0A0C4DH30 117 aa8.03□□□□□ -1.12
ZNF558-201ENST00000301475 RNASE13Q5GAN3 156 aaKnown RBP8.03□□□□□ -1.12
ZNF558-201ENST00000301475 ABCA2Q9BZC7 2435 aa8.02□□□□□ -1.13
ZNF558-201ENST00000301475 DOPEY2Q9Y3R5 2298 aa8.02□□□□□ -1.13
ZNF558-201ENST00000301475 CEMP1Q6PRD7 247 aaPredicted RBP8.02□□□□□ -1.13
ZNF558-201ENST00000301475 TMEM61Q8N0U2 210 aa8.02□□□□□ -1.13
ZNF558-201ENST00000301475 RHPN1-AS1Q9BWJ2 59 aa8.02□□□□□ -1.13
ZNF558-201ENST00000301475 SPANXDQ9BXN6 97 aa8.02□□□□□ -1.13
ZNF558-201ENST00000301475 SPANXCQ9NY87 97 aa8.02□□□□□ -1.13
ZNF558-201ENST00000301475 NDUFA12Q9UI09 145 aa8.02□□□□□ -1.13
ZNF558-201ENST00000301475 ADORA2A-AS1P86434 159 aa8.02□□□□□ -1.13
ZNF558-201ENST00000301475 MIAQ16674 131 aa8.02□□□□□ -1.13
ZNF558-201ENST00000301475 TRAV12-2A0A075B6T6 113 aa8.01□□□□□ -1.13
ZNF558-201ENST00000301475 FAM236AA0A1B0GUQ0 79 aa8.01□□□□□ -1.13
ZNF558-201ENST00000301475 FAM236BA0A1B0GV22 79 aa8.01□□□□□ -1.13
ZNF558-201ENST00000301475 COX6CP09669 75 aa8.01□□□□□ -1.13
ZNF558-201ENST00000301475 USP9YO00507 2555 aaPredicted RBP8.01□□□□□ -1.13
ZNF558-201ENST00000301475 CD28P10747 220 aa8.01□□□□□ -1.13
ZNF558-201ENST00000301475 IGHV1-58A0A0C4DH39 117 aa8□□□□□ -1.13
ZNF558-201ENST00000301475 MRPS36P82909 103 aaKnown RBP8□□□□□ -1.13
ZNF558-201ENST00000301475 DAND5Q8N907 189 aa8□□□□□ -1.13
ZNF558-201ENST00000301475 PPDPFQ9H3Y8 114 aa8□□□□□ -1.13
ZNF558-201ENST00000301475 VPREB3Q9UKI3 123 aa8□□□□□ -1.13
ZNF558-201ENST00000301475 SPANXA1Q9NS26 97 aa8□□□□□ -1.13
ZNF558-201ENST00000301475 ABCA12Q86UK0 2595 aa8□□□□□ -1.13
ZNF558-201ENST00000301475 SMCR5Q8TEV8 140 aa8□□□□□ -1.13
ZNF558-201ENST00000301475 IGHV3OR16-10A0A075B7F0 116 aa7.99□□□□□ -1.13
ZNF558-201ENST00000301475 NPFFO15130 113 aa7.99□□□□□ -1.13
ZNF558-201ENST00000301475 IGKV3-20P01619 116 aa7.99□□□□□ -1.13
ZNF558-201ENST00000301475 MOB4Q9Y3A3 225 aa7.99□□□□□ -1.13
ZNF558-201ENST00000301475 DOPEY1Q5JWR5 2465 aa7.99□□□□□ -1.13
ZNF558-201ENST00000301475 DCANP1Q8TF63 244 aa7.99□□□□□ -1.13
ZNF558-201ENST00000301475 TMEM101Q96IK0 257 aa7.99□□□□□ -1.13
ZNF558-201ENST00000301475 PTPN13Q12923 2485 aa7.99□□□□□ -1.13
ZNF558-201ENST00000301475 VSIG2Q96IQ7 327 aa7.98□□□□□ -1.13
ZNF558-201ENST00000301475 FBXL19-AS1Q494R0 122 aa7.98□□□□□ -1.13
ZNF558-201ENST00000301475 CHD6Q8TD26 2715 aa7.98□□□□□ -1.13
ZNF558-201ENST00000301475 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.98□□□□□ -1.132e-8■■■■□ 19.6
ZNF558-201ENST00000301475 CREBBPQ92793 2442 aa7.98□□□□□ -1.13
ZNF558-201ENST00000301475 GNLYP22749 145 aa7.97□□□□□ -1.13
ZNF558-201ENST00000301475 TMEM126AQ9H061 195 aa7.97□□□□□ -1.13
ZNF558-201ENST00000301475 PRORYQ9H606 182 aa7.97□□□□□ -1.13
ZNF558-201ENST00000301475 A0A1W2PPR1 153 aa7.97□□□□□ -1.13
ZNF558-201ENST00000301475 CITED2Q99967 270 aaPredicted RBP7.97□□□□□ -1.13
ZNF558-201ENST00000301475 DAZ1Q9NQZ3 744 aaKnown RBP7.97□□□□□ -1.13
ZNF558-201ENST00000301475 PYGO1Q9Y3Y4 419 aa7.97□□□□□ -1.13
ZNF558-201ENST00000301475 NACAE9PAV3 2078 aa7.97□□□□□ -1.13
ZNF558-201ENST00000301475 PROK1P58294 105 aa7.97□□□□□ -1.13
ZNF558-201ENST00000301475 IGHG2P01859 326 aa7.96□□□□□ -1.13
ZNF558-201ENST00000301475 TMEM95Q3KNT9 176 aa7.96□□□□□ -1.13
ZNF558-201ENST00000301475 DUX5Q96PT3 197 aa7.96□□□□□ -1.13
ZNF558-201ENST00000301475 Q9UF83 564 aa7.96□□□□□ -1.13
ZNF558-201ENST00000301475 IGHV3-73A0A0B4J1V6 119 aa7.96□□□□□ -1.14
ZNF558-201ENST00000301475 IGHV1OR15-1A0A075B7D0 117 aa7.95□□□□□ -1.14
ZNF558-201ENST00000301475 PF4V1P10720 104 aa7.95□□□□□ -1.14
ZNF558-201ENST00000301475 SPINK13Q1W4C9 94 aa7.95□□□□□ -1.14
ZNF558-201ENST00000301475 UBTD1Q9HAC8 227 aa7.95□□□□□ -1.14
ZNF558-201ENST00000301475 TINCRA0A1B0GVN0 87 aa7.95□□□□□ -1.14
ZNF558-201ENST00000301475 LINC00694P0DN24 101 aa7.95□□□□□ -1.14
ZNF558-201ENST00000301475 BRD3OSQ6XYD6 125 aa7.95□□□□□ -1.14
ZNF558-201ENST00000301475 PRB1P04280 392 aa7.94□□□□□ -1.14
ZNF558-201ENST00000301475 ID1P41134 155 aa7.94□□□□□ -1.14
ZNF558-201ENST00000301475 LMO4P61968 165 aa7.94□□□□□ -1.14
ZNF558-201ENST00000301475 USMG5Q96IX5 58 aa7.94□□□□□ -1.14
ZNF558-201ENST00000301475 IMUPQ9GZP8 106 aa7.94□□□□□ -1.14
ZNF558-201ENST00000301475 LY6EQ16553 131 aa7.94□□□□□ -1.14
ZNF558-201ENST00000301475 C9orf153Q5TBE3 101 aa7.94□□□□□ -1.14
ZNF558-201ENST00000301475 BPESC1Q9GZL8 116 aa7.94□□□□□ -1.14
ZNF558-201ENST00000301475 YAE1D1Q9NRH1 226 aa7.94□□□□□ -1.14
ZNF558-201ENST00000301475 KLK5Q9Y337 293 aaPredicted RBP7.93□□□□□ -1.14
ZNF558-201ENST00000301475 Q8N2B8 174 aa7.93□□□□□ -1.14
ZNF558-201ENST00000301475 C3orf22Q8N5N4 141 aa7.93□□□□□ -1.14
ZNF558-201ENST00000301475 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.93□□□□□ -1.14
ZNF558-201ENST00000301475 CDKN2A-AS1Q9UH64 79 aa7.93□□□□□ -1.14
ZNF558-201ENST00000301475 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.92□□□□□ -1.14
ZNF558-201ENST00000301475 IGKV2-29A2NJV5 120 aaPredicted RBP7.92□□□□□ -1.14
ZNF558-201ENST00000301475 TIMM17BO60830 172 aa7.92□□□□□ -1.14
ZNF558-201ENST00000301475 NDUFA7O95182 113 aa7.92□□□□□ -1.14
ZNF558-201ENST00000301475 ACYP1P07311 99 aa7.92□□□□□ -1.14
ZNF558-201ENST00000301475 CHCHD7Q9BUK0 85 aa7.92□□□□□ -1.14
ZNF558-201ENST00000301475 UBE2D4Q9Y2X8 147 aa7.92□□□□□ -1.14
ZNF558-201ENST00000301475 COX7A2LO14548 114 aa7.92□□□□□ -1.14
ZNF558-201ENST00000301475 DAZ2Q13117 558 aaKnown RBP7.92□□□□□ -1.14
ZNF558-201ENST00000301475 DAZ4Q86SG3 579 aaKnown RBP7.92□□□□□ -1.14
ZNF558-201ENST00000301475 DAZ3Q9NR90 486 aaKnown RBP7.92□□□□□ -1.14
ZNF558-201ENST00000301475 C22orf24Q9Y442 160 aa7.92□□□□□ -1.14
ZNF558-201ENST00000301475 ZANQ9Y493 2812 aa7.92□□□□□ -1.14
ZNF558-201ENST00000301475 CCDC168Q8NDH2 2452 aa7.92□□□□□ -1.14
ZNF558-201ENST00000301475 TLN2Q9Y4G6 2542 aa7.92□□□□□ -1.14
ZNF558-201ENST00000301475 A0A0U1RRA0 63 aa7.92□□□□□ -1.14
ZNF558-201ENST00000301475 C19orf84I3L1E1 186 aa7.92□□□□□ -1.14
ZNF558-201ENST00000301475 LINC00643Q86TS7 51 aa7.92□□□□□ -1.14
ZNF558-201ENST00000301475 LOC107984640A0A0U1RRK4 108 aa7.91□□□□□ -1.14
ZNF558-201ENST00000301475 RBMY1A1P0DJD3 496 aaKnown RBP7.91□□□□□ -1.14
ZNF558-201ENST00000301475 RBMY1CP0DJD4 496 aa7.91□□□□□ -1.14
ZNF558-201ENST00000301475 BLCAPP62952 87 aa7.91□□□□□ -1.14
ZNF558-201ENST00000301475 RBMY1FQ15415 496 aaKnown RBP7.91□□□□□ -1.14
ZNF558-201ENST00000301475 BEAN1Q3B7T3 259 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms