RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 LINC00526Q96FQ7 95 aa11.26□□□□□ -0.61
SCN3B-201ENST00000299333 ZNF22P17026 224 aaPredicted RBP11.26□□□□□ -0.61
SCN3B-201ENST00000299333 DSCAML1Q8TD84 2053 aa11.25□□□□□ -0.61
SCN3B-201ENST00000299333 Q6ZSR3 168 aa11.25□□□□□ -0.61
SCN3B-201ENST00000299333 ZFAND2AQ8N6M9 145 aa11.25□□□□□ -0.61
SCN3B-201ENST00000299333 CACNA1HO95180 2353 aa11.25□□□□□ -0.61
SCN3B-201ENST00000299333 ARHGAP21Q5T5U3 1957 aa11.25□□□□□ -0.61
SCN3B-201ENST00000299333 IGKV1D-37A0A075B6S9 117 aa11.25□□□□□ -0.61
SCN3B-201ENST00000299333 UNQ9165/PRO28630Q6UXU0 137 aa11.25□□□□□ -0.61
SCN3B-201ENST00000299333 C9orf66Q5T8R8 295 aa11.24□□□□□ -0.61
SCN3B-201ENST00000299333 B9D2Q9BPU9 175 aa11.24□□□□□ -0.61
SCN3B-201ENST00000299333 Q8N9L7 120 aa11.24□□□□□ -0.61
SCN3B-201ENST00000299333 MALRD1Q5VYJ5 2156 aa11.24□□□□□ -0.61
SCN3B-201ENST00000299333 K7EMT4 169 aa11.24□□□□□ -0.61
SCN3B-201ENST00000299333 EBI3Q14213 229 aa11.24□□□□□ -0.61
SCN3B-201ENST00000299333 LINC00467Q9BRT7 94 aa11.24□□□□□ -0.61
SCN3B-201ENST00000299333 CFAP126Q5VTH2 177 aa11.23□□□□□ -0.61
SCN3B-201ENST00000299333 UFSP1Q6NVU6 142 aa11.23□□□□□ -0.61
SCN3B-201ENST00000299333 IGHV4-61A0A0C4DH41 118 aa11.23□□□□□ -0.61
SCN3B-201ENST00000299333 A0A0J9YX75 114 aa11.23□□□□□ -0.61
SCN3B-201ENST00000299333 C3orf84H3BNL1 204 aa11.22□□□□□ -0.61
SCN3B-201ENST00000299333 DEFB135Q30KP9 77 aa11.22□□□□□ -0.61
SCN3B-201ENST00000299333 HELZP42694 1942 aaKnown RBP11.22□□□□□ -0.61
SCN3B-201ENST00000299333 WDR81Q562E7 1941 aa11.22□□□□□ -0.61
SCN3B-201ENST00000299333 LINC00269Q8N2A0 174 aa11.22□□□□□ -0.61
SCN3B-201ENST00000299333 IGKV2-24A0A0C4DH68 120 aa11.22□□□□□ -0.61
SCN3B-201ENST00000299333 ACACAQ13085 2346 aa11.22□□□□□ -0.61
SCN3B-201ENST00000299333 PLXND1Q9Y4D7 1925 aa11.22□□□□□ -0.61
SCN3B-201ENST00000299333 CCKP06307 115 aa11.22□□□□□ -0.61
SCN3B-201ENST00000299333 C2orf91Q6ZV80 131 aa11.22□□□□□ -0.61
SCN3B-201ENST00000299333 C1orf158Q8N1D5 194 aa11.21□□□□□ -0.61
SCN3B-201ENST00000299333 GTF3C1Q12789 2109 aa11.21□□□□□ -0.61
SCN3B-201ENST00000299333 Q8N976 141 aa11.21□□□□□ -0.61
SCN3B-201ENST00000299333 MBD6Q96DN6 1003 aa11.21□□□□□ -0.61
SCN3B-201ENST00000299333 COL4A6Q14031 1691 aa11.21□□□□□ -0.61
SCN3B-201ENST00000299333 IGLV4-3A0A075B6K6 122 aa11.21□□□□□ -0.62
SCN3B-201ENST00000299333 TRBV10-1A0A0K0K1A3 114 aa11.21□□□□□ -0.62
SCN3B-201ENST00000299333 GPHB5Q86YW7 130 aa11.2□□□□□ -0.62
SCN3B-201ENST00000299333 YPEL4Q96NS1 127 aa11.2□□□□□ -0.62
SCN3B-201ENST00000299333 SPRY4Q9C004 299 aa11.2□□□□□ -0.62
SCN3B-201ENST00000299333 WFDC10AQ9H1F0 79 aa11.2□□□□□ -0.62
SCN3B-201ENST00000299333 FAM30AQ9NZY2 134 aa11.2□□□□□ -0.62
SCN3B-201ENST00000299333 PLA2G2AP14555 144 aa11.2□□□□□ -0.62
SCN3B-201ENST00000299333 FAM222AQ5U5X8 452 aa11.2□□□□□ -0.62
SCN3B-201ENST00000299333 PRO0255Q9UI72 69 aa11.2□□□□□ -0.62
SCN3B-201ENST00000299333 DCANP1Q8TF63 244 aa11.19□□□□□ -0.62
SCN3B-201ENST00000299333 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.19□□□□□ -0.62
SCN3B-201ENST00000299333 POM121L12Q8N7R1 296 aa11.19□□□□□ -0.62
SCN3B-201ENST00000299333 REG3AQ06141 175 aa11.19□□□□□ -0.62
SCN3B-201ENST00000299333 C6orf99Q4VX62 202 aa11.18□□□□□ -0.62
SCN3B-201ENST00000299333 IGLV1-47P01700 117 aa11.18□□□□□ -0.62
SCN3B-201ENST00000299333 A8MZ25 164 aa11.18□□□□□ -0.62
SCN3B-201ENST00000299333 WFDC13Q8IUB5 93 aa11.18□□□□□ -0.62
SCN3B-201ENST00000299333 MED13Q9UHV7 2174 aa11.18□□□□□ -0.62
SCN3B-201ENST00000299333 Q8N7P7 452 aa11.18□□□□□ -0.62
SCN3B-201ENST00000299333 Q6ZTI0 123 aa11.17□□□□□ -0.62
SCN3B-201ENST00000299333 IGHV4-30-4P0DP06 118 aa11.17□□□□□ -0.62
SCN3B-201ENST00000299333 IGHV4-31P0DP07 118 aa11.17□□□□□ -0.62
SCN3B-201ENST00000299333 FAM19A1Q7Z5A9 133 aa11.17□□□□□ -0.62
SCN3B-201ENST00000299333 CHCHD10Q8WYQ3 142 aaPredicted RBP11.17□□□□□ -0.62
SCN3B-201ENST00000299333 IBA57-AS1B1ANH7 110 aa11.16□□□□□ -0.62
SCN3B-201ENST00000299333 P0C879 139 aa11.16□□□□□ -0.62
SCN3B-201ENST00000299333 RNF138Q8WVD3 245 aa11.16□□□□□ -0.62
SCN3B-201ENST00000299333 PRORYQ9H606 182 aa11.16□□□□□ -0.62
SCN3B-201ENST00000299333 LST1O00453 97 aa11.15□□□□□ -0.62
SCN3B-201ENST00000299333 ZGRF1Q86YA3 2104 aa11.15□□□□□ -0.62
SCN3B-201ENST00000299333 XAGE1AQ9HD64 81 aa11.15□□□□□ -0.62
SCN3B-201ENST00000299333 TRAV7A0A075B6U4 112 aa11.15□□□□□ -0.62
SCN3B-201ENST00000299333 IGF1P05019 195 aa11.15□□□□□ -0.62
SCN3B-201ENST00000299333 ZNF295-AS1Q8N0V1 137 aa11.15□□□□□ -0.62
SCN3B-201ENST00000299333 RNF185Q96GF1 192 aa11.15□□□□□ -0.63
SCN3B-201ENST00000299333 MGAMO43451 1857 aa11.15□□□□□ -0.63
SCN3B-201ENST00000299333 Q6JHZ5 121 aa11.14□□□□□ -0.63
SCN3B-201ENST00000299333 MAP6D1Q9H9H5 199 aa11.14□□□□□ -0.63
SCN3B-201ENST00000299333 ZFP36P26651 326 aaKnown RBP11.14□□□□□ -0.63
SCN3B-201ENST00000299333 CCDC140Q96MF4 163 aa11.14□□□□□ -0.63
SCN3B-201ENST00000299333 U3KQK5 164 aa11.14□□□□□ -0.63
SCN3B-201ENST00000299333 NCKAP5O14513 1909 aa11.14□□□□□ -0.63
SCN3B-201ENST00000299333 H7C423 109 aa11.14□□□□□ -0.63
SCN3B-201ENST00000299333 NBASA2RRP1 2371 aa11.13□□□□□ -0.63
SCN3B-201ENST00000299333 TRBV6-5A0A0K0K1A5 114 aa11.13□□□□□ -0.63
SCN3B-201ENST00000299333 CRIP1P50238 77 aa11.13□□□□□ -0.63
SCN3B-201ENST00000299333 C4orf26Q17RF5 130 aa11.13□□□□□ -0.63
SCN3B-201ENST00000299333 C22orf34Q6ZV56 151 aa11.13□□□□□ -0.63
SCN3B-201ENST00000299333 TICRRQ7Z2Z1 1910 aa11.13□□□□□ -0.63
SCN3B-201ENST00000299333 BEAN1Q3B7T3 259 aa11.13□□□□□ -0.63
SCN3B-201ENST00000299333 FRMPD3Q5JV73 1810 aa11.13□□□□□ -0.63
SCN3B-201ENST00000299333 TNCP24821 2201 aa11.12□□□□□ -0.63
SCN3B-201ENST00000299333 MED13LQ71F56 2210 aa11.12□□□□□ -0.63
SCN3B-201ENST00000299333 A0A087WVE0 104 aa11.12□□□□□ -0.63
SCN3B-201ENST00000299333 BRWD1-AS2P59051 145 aa11.12□□□□□ -0.63
SCN3B-201ENST00000299333 Q6ZQY7 126 aa11.12□□□□□ -0.63
SCN3B-201ENST00000299333 C4orf3Q8WVX3 66 aa11.12□□□□□ -0.63
SCN3B-201ENST00000299333 CELA1Q9UNI1 258 aa11.12□□□□□ -0.63
SCN3B-201ENST00000299333 ATRXP46100 2492 aa11.11□□□□□ -0.63
SCN3B-201ENST00000299333 Q6ZS46 218 aa11.11□□□□□ -0.63
SCN3B-201ENST00000299333 CRYGDP07320 174 aa11.11□□□□□ -0.63
SCN3B-201ENST00000299333 TANC1Q9C0D5 1861 aa11.1□□□□□ -0.63
SCN3B-201ENST00000299333 PRYO14603 147 aa11.1□□□□□ -0.63
SCN3B-201ENST00000299333 TRBV7-6A0A0J9YX20 115 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms