RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 C9orf153Q5TBE3 101 aa8.47□□□□□ -1.05
TRUB1-201ENST00000298746 SOCS3O14543 225 aa8.46□□□□□ -1.05
TRUB1-201ENST00000298746 RS1O15537 224 aa8.46□□□□□ -1.06
TRUB1-201ENST00000298746 IGHV1-58A0A0C4DH39 117 aa8.45□□□□□ -1.06
TRUB1-201ENST00000298746 KLLNB2CW77 178 aa8.45□□□□□ -1.06
TRUB1-201ENST00000298746 NSUN5P1Q3KNT7 163 aa8.45□□□□□ -1.06
TRUB1-201ENST00000298746 ACACBO00763 2458 aa8.45□□□□□ -1.06
TRUB1-201ENST00000298746 TRBV6-5A0A0K0K1A5 114 aa8.45□□□□□ -1.06
TRUB1-201ENST00000298746 FAM208BQ5VWN6 2430 aa8.44□□□□□ -1.06
TRUB1-201ENST00000298746 IGHV3OR16-12A0A075B7B8 117 aa8.44□□□□□ -1.06
TRUB1-201ENST00000298746 PRM2P04554 102 aa8.44□□□□□ -1.06
TRUB1-201ENST00000298746 SYNJ2BPP57105 145 aa8.44□□□□□ -1.06
TRUB1-201ENST00000298746 MIAQ16674 131 aa8.44□□□□□ -1.06
TRUB1-201ENST00000298746 TRAV13-1A0A0B4J241 112 aa8.43□□□□□ -1.06
TRUB1-201ENST00000298746 KHDC1LQ5JSQ8 128 aa8.43□□□□□ -1.06
TRUB1-201ENST00000298746 C11orf71Q6IPW1 123 aa8.43□□□□□ -1.06
TRUB1-201ENST00000298746 GAGE2AQ6NT46 116 aa8.43□□□□□ -1.06
TRUB1-201ENST00000298746 Q6Q795 121 aa8.43□□□□□ -1.06
TRUB1-201ENST00000298746 NXPH4O95158 308 aa8.43□□□□□ -1.06
TRUB1-201ENST00000298746 IGHV4-38-2P0DP08 117 aa8.43□□□□□ -1.06
TRUB1-201ENST00000298746 Q9H8V8 135 aa8.43□□□□□ -1.06
TRUB1-201ENST00000298746 SPTBN4Q9H254 2564 aa8.43□□□□□ -1.06
TRUB1-201ENST00000298746 IGKV3OR2-268A0A0C4DH90 116 aa8.42□□□□□ -1.06
TRUB1-201ENST00000298746 LMO4P61968 165 aa8.42□□□□□ -1.06
TRUB1-201ENST00000298746 ADORA2A-AS1P86434 159 aa8.42□□□□□ -1.06
TRUB1-201ENST00000298746 SONP18583 2426 aaKnown RBP8.42□□□□□ -1.06
TRUB1-201ENST00000298746 CACNA1AO00555 2505 aa8.42□□□□□ -1.06
TRUB1-201ENST00000298746 LST1O00453 97 aa8.42□□□□□ -1.06
TRUB1-201ENST00000298746 CFAP161Q6P656 301 aa8.42□□□□□ -1.06
TRUB1-201ENST00000298746 TMEM61Q8N0U2 210 aa8.42□□□□□ -1.06
TRUB1-201ENST00000298746 PRIMA1Q86XR5 153 aa8.42□□□□□ -1.06
TRUB1-201ENST00000298746 POM121L12Q8N7R1 296 aa8.42□□□□□ -1.06
TRUB1-201ENST00000298746 VSIG2Q96IQ7 327 aa8.42□□□□□ -1.06
TRUB1-201ENST00000298746 EDA2RQ9HAV5 297 aa8.42□□□□□ -1.06
TRUB1-201ENST00000298746 CDKN2A-AS1Q9UH64 79 aa8.42□□□□□ -1.06
TRUB1-201ENST00000298746 A0A1W2PPR1 153 aa8.41□□□□□ -1.06
TRUB1-201ENST00000298746 A0A0J9YX75 114 aa8.41□□□□□ -1.06
TRUB1-201ENST00000298746 M0QXV9 152 aa8.41□□□□□ -1.06
TRUB1-201ENST00000298746 HOXD3P31249 432 aaPredicted RBP8.41□□□□□ -1.06
TRUB1-201ENST00000298746 FAM19A4Q96LR4 140 aa8.41□□□□□ -1.06
TRUB1-201ENST00000298746 C9orf85Q96MD7 179 aa8.41□□□□□ -1.06
TRUB1-201ENST00000298746 BAALC-AS2P0C853 105 aa8.4□□□□□ -1.06
TRUB1-201ENST00000298746 DCANP1Q8TF63 244 aa8.4□□□□□ -1.06
TRUB1-201ENST00000298746 LINC01587Q99440 93 aa8.4□□□□□ -1.06
TRUB1-201ENST00000298746 TOMM7Q9P0U1 55 aa8.4□□□□□ -1.06
TRUB1-201ENST00000298746 FBXL19-AS1Q494R0 122 aa8.4□□□□□ -1.07
TRUB1-201ENST00000298746 FAM110AQ9BQ89 295 aa8.4□□□□□ -1.07
TRUB1-201ENST00000298746 SPANXA1Q9NS26 97 aa8.4□□□□□ -1.07
TRUB1-201ENST00000298746 DNAL4O96015 105 aa8.39□□□□□ -1.07
TRUB1-201ENST00000298746 DEFB131AP59861 70 aa8.39□□□□□ -1.07
TRUB1-201ENST00000298746 K7ENP7 123 aa8.39□□□□□ -1.07
TRUB1-201ENST00000298746 MRPL23Q16540 153 aaKnown RBP8.39□□□□□ -1.07
TRUB1-201ENST00000298746 C10orf99Q6UWK7 81 aa8.39□□□□□ -1.07
TRUB1-201ENST00000298746 Q9UF83 564 aa8.39□□□□□ -1.07
TRUB1-201ENST00000298746 IGHG2P01859 326 aa8.39□□□□□ -1.07
TRUB1-201ENST00000298746 MRPS36P82909 103 aaKnown RBP8.39□□□□□ -1.07
TRUB1-201ENST00000298746 JMJD1CQ15652 2540 aa8.39□□□□□ -1.07
TRUB1-201ENST00000298746 CELSR1Q9NYQ6 3014 aa8.38□□□□□ -1.07
TRUB1-201ENST00000298746 DAZ2Q13117 558 aaKnown RBP8.38□□□□□ -1.07
TRUB1-201ENST00000298746 DAZ4Q86SG3 579 aaKnown RBP8.38□□□□□ -1.07
TRUB1-201ENST00000298746 APRG1Q8IVJ8 170 aa8.38□□□□□ -1.07
TRUB1-201ENST00000298746 DAZ3Q9NR90 486 aaKnown RBP8.38□□□□□ -1.07
TRUB1-201ENST00000298746 POLQO75417 2590 aa8.38□□□□□ -1.07
TRUB1-201ENST00000298746 LINC00467Q9BRT7 94 aa8.38□□□□□ -1.07
TRUB1-201ENST00000298746 HRNRQ86YZ3 2850 aaPredicted RBP8.38□□□□□ -1.07
TRUB1-201ENST00000298746 SPANXDQ9BXN6 97 aa8.38□□□□□ -1.07
TRUB1-201ENST00000298746 Q9HAA7 133 aa8.38□□□□□ -1.07
TRUB1-201ENST00000298746 SPANXCQ9NY87 97 aa8.38□□□□□ -1.07
TRUB1-201ENST00000298746 IGHV3-53P01767 116 aa8.37□□□□□ -1.07
TRUB1-201ENST00000298746 LITAFQ99732 161 aa8.37□□□□□ -1.07
TRUB1-201ENST00000298746 TMEM126AQ9H061 195 aa8.37□□□□□ -1.07
TRUB1-201ENST00000298746 TINCRA0A1B0GVN0 87 aa8.36□□□□□ -1.07
TRUB1-201ENST00000298746 IGHV4-61A0A0C4DH41 118 aa8.36□□□□□ -1.07
TRUB1-201ENST00000298746 C19orf54Q5BKX5 351 aa8.36□□□□□ -1.07
TRUB1-201ENST00000298746 PIMREGQ9BSJ6 248 aa8.36□□□□□ -1.07
TRUB1-201ENST00000298746 LINC00308Q8TCZ7 52 aa8.36□□□□□ -1.07
TRUB1-201ENST00000298746 PPDPFQ9H3Y8 114 aa8.36□□□□□ -1.07
TRUB1-201ENST00000298746 H3BUA1 57 aa8.35□□□□□ -1.07
TRUB1-201ENST00000298746 ACYP1P07311 99 aa8.35□□□□□ -1.07
TRUB1-201ENST00000298746 OR13C6PQ8NH95 151 aa8.35□□□□□ -1.07
TRUB1-201ENST00000298746 COPS9Q8WXC6 57 aa8.35□□□□□ -1.07
TRUB1-201ENST00000298746 PYGO1Q9Y3Y4 419 aa8.35□□□□□ -1.07
TRUB1-201ENST00000298746 FN1P02751 2386 aaKnown RBP8.35□□□□□ -1.07
TRUB1-201ENST00000298746 FAM240AA0A1B0GVK7 77 aa8.35□□□□□ -1.07
TRUB1-201ENST00000298746 ATP5J2P56134 94 aa8.35□□□□□ -1.07
TRUB1-201ENST00000298746 KLK5Q9Y337 293 aaPredicted RBP8.35□□□□□ -1.07
TRUB1-201ENST00000298746 COX7A2LO14548 114 aa8.35□□□□□ -1.07
TRUB1-201ENST00000298746 LINC00694P0DN24 101 aa8.35□□□□□ -1.07
TRUB1-201ENST00000298746 ZNF415Q09FC8 603 aa8.35□□□□□ -1.07
TRUB1-201ENST00000298746 LINC00643Q86TS7 51 aa8.35□□□□□ -1.07
TRUB1-201ENST00000298746 K7EMT4 169 aa8.34□□□□□ -1.07
TRUB1-201ENST00000298746 CENPEQ02224 2701 aa8.34□□□□□ -1.07
TRUB1-201ENST00000298746 PIK3CD-AS1Q5SR53 167 aa8.34□□□□□ -1.07
TRUB1-201ENST00000298746 UBE2D4Q9Y2X8 147 aa8.34□□□□□ -1.07
TRUB1-201ENST00000298746 IGKV3D-7A0A0C4DH55 119 aa8.33□□□□□ -1.08
TRUB1-201ENST00000298746 K7EQG2 157 aa8.33□□□□□ -1.08
TRUB1-201ENST00000298746 CRPP02741 224 aa8.33□□□□□ -1.08
TRUB1-201ENST00000298746 NDUFA7O95182 113 aa8.33□□□□□ -1.08
TRUB1-201ENST00000298746 HERVK_113P63121 156 aa8.33□□□□□ -1.08
TRUB1-201ENST00000298746 KLK9Q2XQG4 91 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms