RNA–Protein interactions for RNA: ENST00000298694.8

ARHGEF40-201, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ARHGEF40, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-201ENST00000298694 CHD3Q12873 2000 aaKnown RBP12.42□□□□□ -0.42
ARHGEF40-201ENST00000298694 A0A087WZ39 114 aa12.42□□□□□ -0.42
ARHGEF40-201ENST00000298694 C1orf229Q6ZS94 237 aaPredicted RBP12.42□□□□□ -0.42
ARHGEF40-201ENST00000298694 UPK3BQ9BT76 320 aa12.42□□□□□ -0.42
ARHGEF40-201ENST00000298694 NACAE9PAV3 2078 aa12.42□□□□□ -0.42
ARHGEF40-201ENST00000298694 LINC00482Q8N8I6 264 aa12.41□□□□□ -0.42
ARHGEF40-201ENST00000298694 IGLC6P0CF74 106 aa12.41□□□□□ -0.42
ARHGEF40-201ENST00000298694 NEXN-AS1Q8NBZ9 246 aa12.41□□□□□ -0.42
ARHGEF40-201ENST00000298694 RNASE8Q8TDE3 154 aaKnown RBP12.41□□□□□ -0.42
ARHGEF40-201ENST00000298694 J3KT08 172 aa12.41□□□□□ -0.42
ARHGEF40-201ENST00000298694 BRWD1-AS2P59051 145 aa12.41□□□□□ -0.42
ARHGEF40-201ENST00000298694 ADAMTS9Q9P2N4 1935 aa12.4□□□□□ -0.42
ARHGEF40-201ENST00000298694 GDF5OSQ5U4N7 250 aa12.4□□□□□ -0.42
ARHGEF40-201ENST00000298694 TRAV23DV6A0A075B6W5 121 aa12.4□□□□□ -0.42
ARHGEF40-201ENST00000298694 H7C423 109 aa12.39□□□□□ -0.43
ARHGEF40-201ENST00000298694 C22orf34Q6ZV56 151 aa12.39□□□□□ -0.43
ARHGEF40-201ENST00000298694 CDKN2A-AS1Q9UH64 79 aa12.39□□□□□ -0.43
ARHGEF40-201ENST00000298694 COL4A3Q01955 1670 aa12.39□□□□□ -0.43
ARHGEF40-201ENST00000298694 FAM19A5Q7Z5A7 132 aaPredicted RBP12.38□□□□□ -0.43
ARHGEF40-201ENST00000298694 SHANK1Q9Y566 2161 aa12.38□□□□□ -0.43
ARHGEF40-201ENST00000298694 CFAP126Q5VTH2 177 aa12.38□□□□□ -0.43
ARHGEF40-201ENST00000298694 G3V4G9 280 aa12.37□□□□□ -0.43
ARHGEF40-201ENST00000298694 Q6ZPA2 131 aa12.37□□□□□ -0.43
ARHGEF40-201ENST00000298694 Q6ZSV7 163 aa12.37□□□□□ -0.43
ARHGEF40-201ENST00000298694 SPATA12Q7Z6I5 190 aa12.37□□□□□ -0.43
ARHGEF40-201ENST00000298694 CREBBPQ92793 2442 aa12.37□□□□□ -0.43
ARHGEF40-201ENST00000298694 OBSL1O75147 1896 aa12.37□□□□□ -0.43
ARHGEF40-201ENST00000298694 C10orf99Q6UWK7 81 aa12.37□□□□□ -0.43
ARHGEF40-201ENST00000298694 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.36□□□□□ -0.43
ARHGEF40-201ENST00000298694 TMEM223A0PJW6 202 aa12.36□□□□□ -0.43
ARHGEF40-201ENST00000298694 SLPIP03973 132 aa12.36□□□□□ -0.43
ARHGEF40-201ENST00000298694 LINC00643Q86TS7 51 aa12.36□□□□□ -0.43
ARHGEF40-201ENST00000298694 MED13LQ71F56 2210 aa12.36□□□□□ -0.43
ARHGEF40-201ENST00000298694 IGLV4-3A0A075B6K6 122 aa12.36□□□□□ -0.43
ARHGEF40-201ENST00000298694 CASC2Q6XLA1 102 aa12.36□□□□□ -0.43
ARHGEF40-201ENST00000298694 KIR2DL5BQ8NHK3 375 aa12.35□□□□□ -0.43
ARHGEF40-201ENST00000298694 ZNF22P17026 224 aaPredicted RBP12.35□□□□□ -0.43
ARHGEF40-201ENST00000298694 SCXQ7RTU7 201 aa12.35□□□□□ -0.43
ARHGEF40-201ENST00000298694 TMEM131Q92545 1883 aa12.34□□□□□ -0.43
ARHGEF40-201ENST00000298694 TRBV6-8A0A0A6YYG3 113 aa12.34□□□□□ -0.43
ARHGEF40-201ENST00000298694 ZFAND3Q9H8U3 227 aa12.34□□□□□ -0.43
ARHGEF40-201ENST00000298694 PROK1P58294 105 aa12.34□□□□□ -0.43
ARHGEF40-201ENST00000298694 MLST8Q9BVC4 326 aa12.34□□□□□ -0.43
ARHGEF40-201ENST00000298694 XAGE1AQ9HD64 81 aa12.34□□□□□ -0.43
ARHGEF40-201ENST00000298694 MIFP14174 115 aa12.34□□□□□ -0.43
ARHGEF40-201ENST00000298694 PIK3CD-AS1Q5SR53 167 aa12.34□□□□□ -0.43
ARHGEF40-201ENST00000298694 PCNX2A6NKB5 2137 aa12.34□□□□□ -0.43
ARHGEF40-201ENST00000298694 SHISA2Q6UWI4 295 aa12.33□□□□□ -0.43
ARHGEF40-201ENST00000298694 LY6LH3BQJ8 138 aa12.33□□□□□ -0.44
ARHGEF40-201ENST00000298694 SDIM1Q6ZPB5 146 aa12.33□□□□□ -0.44
ARHGEF40-201ENST00000298694 PLCE1Q9P212 2302 aa12.33□□□□□ -0.44
ARHGEF40-201ENST00000298694 TEX49A0A1B0GTD5 131 aa12.32□□□□□ -0.44
ARHGEF40-201ENST00000298694 ZNF295-AS1Q8N0V1 137 aa12.32□□□□□ -0.44
ARHGEF40-201ENST00000298694 M0QY20 66 aa12.32□□□□□ -0.44
ARHGEF40-201ENST00000298694 DCANP1Q8TF63 244 aa12.32□□□□□ -0.44
ARHGEF40-201ENST00000298694 IBA57-AS1B1ANH7 110 aa12.32□□□□□ -0.44
ARHGEF40-201ENST00000298694 EIF4EBP1Q13541 118 aaPredicted RBP12.32□□□□□ -0.44
ARHGEF40-201ENST00000298694 LINC00308Q8TCZ7 52 aa12.32□□□□□ -0.44
ARHGEF40-201ENST00000298694 SVIPQ8NHG7 77 aa12.31□□□□□ -0.44
ARHGEF40-201ENST00000298694 C2orf16Q68DN1 1984 aa12.31□□□□□ -0.44
ARHGEF40-201ENST00000298694 BBC3Q96PG8 261 aaPredicted RBP12.31□□□□□ -0.44
ARHGEF40-201ENST00000298694 TRBV6-4A0A1B0GX49 114 aa12.3□□□□□ -0.44
ARHGEF40-201ENST00000298694 EBI3Q14213 229 aa12.3□□□□□ -0.44
ARHGEF40-201ENST00000298694 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.3□□□□□ -0.44
ARHGEF40-201ENST00000298694 Q8N976 141 aa12.3□□□□□ -0.44
ARHGEF40-201ENST00000298694 ZFHX2Q9C0A1 2572 aaPredicted RBP12.3□□□□□ -0.44
ARHGEF40-201ENST00000298694 USP17L23D6RBM5 183 aa12.3□□□□□ -0.44
ARHGEF40-201ENST00000298694 FSTL3O95633 263 aa12.3□□□□□ -0.44
ARHGEF40-201ENST00000298694 LY6G6DO95868 133 aa12.3□□□□□ -0.44
ARHGEF40-201ENST00000298694 CRIP1P50238 77 aa12.3□□□□□ -0.44
ARHGEF40-201ENST00000298694 C11orf71Q6IPW1 123 aa12.3□□□□□ -0.44
ARHGEF40-201ENST00000298694 ZNF843Q8N446 348 aa12.3□□□□□ -0.44
ARHGEF40-201ENST00000298694 SPANXB1Q9NS25 103 aaPredicted RBP12.3□□□□□ -0.44
ARHGEF40-201ENST00000298694 DENND4AQ7Z401 1863 aa12.29□□□□□ -0.44
ARHGEF40-201ENST00000298694 SYCNQ0VAF6 134 aa12.29□□□□□ -0.44
ARHGEF40-201ENST00000298694 CRIP3Q6Q6R5 217 aa12.29□□□□□ -0.44
ARHGEF40-201ENST00000298694 WFDC10BQ8IUB3 73 aa12.29□□□□□ -0.44
ARHGEF40-201ENST00000298694 ENHOQ6UWT2 76 aa12.28□□□□□ -0.44
ARHGEF40-201ENST00000298694 BRK1Q8WUW1 75 aa12.28□□□□□ -0.44
ARHGEF40-201ENST00000298694 ZNF702PQ9H963 129 aa12.28□□□□□ -0.44
ARHGEF40-201ENST00000298694 IGLV2-18A0A075B6J9 118 aa12.28□□□□□ -0.44
ARHGEF40-201ENST00000298694 TRAV10A0A0B4J240 114 aa12.28□□□□□ -0.44
ARHGEF40-201ENST00000298694 TP73-AS1Q9UF72 201 aa12.28□□□□□ -0.44
ARHGEF40-201ENST00000298694 RNF185Q96GF1 192 aa12.27□□□□□ -0.44
ARHGEF40-201ENST00000298694 ZNF106Q9H2Y7 1883 aaKnown RBP12.27□□□□□ -0.44
ARHGEF40-201ENST00000298694 C7orf33Q8WU49 177 aa12.27□□□□□ -0.45
ARHGEF40-201ENST00000298694 IGKV2-28A0A075B6P5 120 aa12.26□□□□□ -0.45
ARHGEF40-201ENST00000298694 IGKV2D-28P01615 120 aa12.26□□□□□ -0.45
ARHGEF40-201ENST00000298694 MAPKAPK5-AS1Q8N8E1 139 aa12.26□□□□□ -0.45
ARHGEF40-201ENST00000298694 TRIAP1O43715 76 aa12.26□□□□□ -0.45
ARHGEF40-201ENST00000298694 C20orf197Q8N268 126 aa12.26□□□□□ -0.45
ARHGEF40-201ENST00000298694 MBD6Q96DN6 1003 aa12.26□□□□□ -0.45
ARHGEF40-201ENST00000298694 C6orf99Q4VX62 202 aa12.25□□□□□ -0.45
ARHGEF40-201ENST00000298694 C1orf158Q8N1D5 194 aa12.25□□□□□ -0.45
ARHGEF40-201ENST00000298694 PSMG3-AS1Q96PY0 264 aa12.25□□□□□ -0.45
ARHGEF40-201ENST00000298694 M0R2N4 97 aa12.25□□□□□ -0.45
ARHGEF40-201ENST00000298694 C18orf65Q6ZTR6 163 aa12.25□□□□□ -0.45
ARHGEF40-201ENST00000298694 WFDC10AQ9H1F0 79 aa12.24□□□□□ -0.45
ARHGEF40-201ENST00000298694 A8MZ25 164 aa12.24□□□□□ -0.45
ARHGEF40-201ENST00000298694 SPTSSBQ8NFR3 76 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 271.3 ms