RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 PIK3CD-AS1Q5SR53 167 aa15.37■□□□□ 0.05
SOX17-201ENST00000297316 SPXQ9BT56 116 aa15.37■□□□□ 0.05
SOX17-201ENST00000297316 GAGE10A6NGK3 116 aa15.36■□□□□ 0.05
SOX17-201ENST00000297316 RIPPLY3P57055 190 aa15.36■□□□□ 0.05
SOX17-201ENST00000297316 OCIAD2Q56VL3 154 aa15.36■□□□□ 0.05
SOX17-201ENST00000297316 ZC2HC1BQ5TFG8 222 aa15.36■□□□□ 0.05
SOX17-201ENST00000297316 PKD1L1Q8TDX9 2849 aa15.36■□□□□ 0.05
SOX17-201ENST00000297316 NAA38Q9BRA0 125 aaKnown RBP15.35■□□□□ 0.05
SOX17-201ENST00000297316 EDA2RQ9HAV5 297 aa15.35■□□□□ 0.05
SOX17-201ENST00000297316 IGIPA6NJ69 53 aa15.35■□□□□ 0.05
SOX17-201ENST00000297316 H3BUT2 72 aa15.35■□□□□ 0.05
SOX17-201ENST00000297316 TTTY13Q9BZ97 58 aa15.35■□□□□ 0.05
SOX17-201ENST00000297316 COL6A5A8TX70 2615 aa15.35■□□□□ 0.05
SOX17-201ENST00000297316 C3orf56Q8N813 242 aa15.34■□□□□ 0.05
SOX17-201ENST00000297316 CHTOPQ9Y3Y2 248 aaKnown RBP15.34■□□□□ 0.05
SOX17-201ENST00000297316 CMYA5Q8N3K9 4069 aa15.34■□□□□ 0.05
SOX17-201ENST00000297316 PRSS29PA6NIE9 313 aa15.33■□□□□ 0.05
SOX17-201ENST00000297316 F8VRH5 84 aa15.33■□□□□ 0.05
SOX17-201ENST00000297316 H7C1H1 209 aa15.33■□□□□ 0.05
SOX17-201ENST00000297316 TMEM263Q8WUH6 116 aaKnown RBP15.33■□□□□ 0.05
SOX17-201ENST00000297316 RAB37Q96AX2 223 aa15.33■□□□□ 0.05
SOX17-201ENST00000297316 C1QTNF4Q9BXJ3 329 aa15.33■□□□□ 0.05
SOX17-201ENST00000297316 RS1O15537 224 aa15.33■□□□□ 0.04
SOX17-201ENST00000297316 TRGV1A0A0A0MS02 117 aa15.32■□□□□ 0.04
SOX17-201ENST00000297316 PLAC8L1A1L4L8 177 aa15.32■□□□□ 0.04
SOX17-201ENST00000297316 I3L3M4 83 aa15.32■□□□□ 0.04
SOX17-201ENST00000297316 Q6ZTI0 123 aa15.32■□□□□ 0.04
SOX17-201ENST00000297316 OXLD1Q5BKU9 147 aa15.31■□□□□ 0.04
SOX17-201ENST00000297316 GTF2H5Q6ZYL4 71 aa15.31■□□□□ 0.04
SOX17-201ENST00000297316 NOP10Q9NPE3 64 aaKnown RBP15.31■□□□□ 0.04
SOX17-201ENST00000297316 PLNP26678 52 aa15.3■□□□□ 0.04
SOX17-201ENST00000297316 RHOHQ15669 191 aa15.3■□□□□ 0.04
SOX17-201ENST00000297316 OPRPNQ99935 248 aaPredicted RBP15.29■□□□□ 0.04
SOX17-201ENST00000297316 HIGD1BQ9P298 99 aa15.29■□□□□ 0.04
SOX17-201ENST00000297316 K7EP34 96 aa15.28■□□□□ 0.04
SOX17-201ENST00000297316 RHODO00212 210 aa15.28■□□□□ 0.04
SOX17-201ENST00000297316 IGHV3-53P01767 116 aa15.28■□□□□ 0.04
SOX17-201ENST00000297316 TIMM17AQ99595 171 aa15.28■□□□□ 0.04
SOX17-201ENST00000297316 CHAC1Q9BUX1 264 aa15.28■□□□□ 0.04
SOX17-201ENST00000297316 GCSHP23434 173 aa15.28■□□□□ 0.04
SOX17-201ENST00000297316 RRN3P1Q2M238 152 aa15.28■□□□□ 0.04
SOX17-201ENST00000297316 C20orf203Q8NBC4 194 aa15.28■□□□□ 0.04
SOX17-201ENST00000297316 TNFRSF18Q9Y5U5 241 aa15.28■□□□□ 0.04
SOX17-201ENST00000297316 FXYD2P54710 66 aa15.27■□□□□ 0.04
SOX17-201ENST00000297316 ZNF479Q96JC4 524 aa15.27■□□□□ 0.04
SOX17-201ENST00000297316 TRBV25-1A0A075B6N4 114 aa15.27■□□□□ 0.03
SOX17-201ENST00000297316 EMP1P54849 157 aa15.27■□□□□ 0.03
SOX17-201ENST00000297316 VPS25Q9BRG1 176 aa15.27■□□□□ 0.03
SOX17-201ENST00000297316 IGLV4-69A0A075B6H9 119 aa15.26■□□□□ 0.03
SOX17-201ENST00000297316 WIPF1O43516 503 aa15.26■□□□□ 0.03
SOX17-201ENST00000297316 C16orf74Q96GX8 76 aa15.26■□□□□ 0.03
SOX17-201ENST00000297316 TMEM141Q96I45 108 aa15.26■□□□□ 0.03
SOX17-201ENST00000297316 A0A1W2PPM0 123 aa15.26■□□□□ 0.03
SOX17-201ENST00000297316 LINC01549A6NIU2 74 aa15.25■□□□□ 0.03
SOX17-201ENST00000297316 SMIM13P0DJ93 91 aa15.25■□□□□ 0.03
SOX17-201ENST00000297316 PMVKQ15126 192 aa15.25■□□□□ 0.03
SOX17-201ENST00000297316 SHISA2Q6UWI4 295 aa15.25■□□□□ 0.03
SOX17-201ENST00000297316 MAPKAPK5-AS1Q8N8E1 139 aa15.25■□□□□ 0.03
SOX17-201ENST00000297316 IGHV3-38A0A0C4DH36 116 aa15.24■□□□□ 0.03
SOX17-201ENST00000297316 K7ERU9 68 aa15.24■□□□□ 0.03
SOX17-201ENST00000297316 C11orf86A6NJI1 115 aa15.23■□□□□ 0.03
SOX17-201ENST00000297316 DAZ2Q13117 558 aaKnown RBP15.23■□□□□ 0.03
SOX17-201ENST00000297316 PHLDA1Q8WV24 401 aaPredicted RBP15.23■□□□□ 0.03
SOX17-201ENST00000297316 GAGE7O76087 117 aa15.23■□□□□ 0.03
SOX17-201ENST00000297316 GAGE12FP0CL80 117 aa15.23■□□□□ 0.03
SOX17-201ENST00000297316 GAGE12GP0CL81 117 aa15.23■□□□□ 0.03
SOX17-201ENST00000297316 GAGE12IP0CL82 117 aa15.23■□□□□ 0.03
SOX17-201ENST00000297316 SPCS1Q9Y6A9 102 aa15.23■□□□□ 0.03
SOX17-201ENST00000297316 KRTAP10-11P60412 298 aa15.22■□□□□ 0.03
SOX17-201ENST00000297316 DEFB135Q30KP9 77 aa15.22■□□□□ 0.03
SOX17-201ENST00000297316 X6R8D5 127 aa15.22■□□□□ 0.03
SOX17-201ENST00000297316 FAM104AQ969W3 186 aa15.21■□□□□ 0.03
SOX17-201ENST00000297316 K7ERJ3 54 aa15.21■□□□□ 0.02
SOX17-201ENST00000297316 SAMD5Q5TGI4 173 aa15.21■□□□□ 0.02
SOX17-201ENST00000297316 CHCHD7Q9BUK0 85 aa15.21■□□□□ 0.02
SOX17-201ENST00000297316 FABP2P12104 132 aa15.2■□□□□ 0.02
SOX17-201ENST00000297316 CEMP1Q6PRD7 247 aaPredicted RBP15.2■□□□□ 0.02
SOX17-201ENST00000297316 IGLV4-3A0A075B6K6 122 aa15.2■□□□□ 0.02
SOX17-201ENST00000297316 IGHV4-30-4P0DP06 118 aa15.2■□□□□ 0.02
SOX17-201ENST00000297316 CEND1Q8N111 149 aa15.2■□□□□ 0.02
SOX17-201ENST00000297316 ZNRF2Q8NHG8 242 aa15.2■□□□□ 0.02
SOX17-201ENST00000297316 DNAJC30Q96LL9 226 aa15.2■□□□□ 0.02
SOX17-201ENST00000297316 TRAV4A0A0B4J268 109 aa15.19■□□□□ 0.02
SOX17-201ENST00000297316 OR5A1Q8NGJ0 315 aa15.19■□□□□ 0.02
SOX17-201ENST00000297316 OVOL2Q9BRP0 275 aa15.19■□□□□ 0.02
SOX17-201ENST00000297316 TM2D2Q9BX73 214 aa15.19■□□□□ 0.02
SOX17-201ENST00000297316 NHP2Q9NX24 153 aaKnown RBP15.18■□□□□ 0.02
SOX17-201ENST00000297316 ANK2Q01484 3957 aa15.18■□□□□ 0.02
SOX17-201ENST00000297316 TRGV2A0A075B6R0 118 aa15.17■□□□□ 0.02
SOX17-201ENST00000297316 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.17■□□□□ 0.02
SOX17-201ENST00000297316 IGKV2-29A2NJV5 120 aaPredicted RBP15.17■□□□□ 0.02
SOX17-201ENST00000297316 SLC25A29Q8N8R3 303 aa15.16■□□□□ 0.02
SOX17-201ENST00000297316 PRADC1Q9BSG0 188 aa15.16■□□□□ 0.02
SOX17-201ENST00000297316 E9PLD3 99 aa15.16■□□□□ 0.02
SOX17-201ENST00000297316 K7EQD1 137 aa15.16■□□□□ 0.02
SOX17-201ENST00000297316 DEFB4AO15263 64 aa15.16■□□□□ 0.02
SOX17-201ENST00000297316 APOC4P55056 127 aa15.15■□□□□ 0.02
SOX17-201ENST00000297316 KIR2DL5BQ8NHK3 375 aa15.15■□□□□ 0.02
SOX17-201ENST00000297316 RNASE13Q5GAN3 156 aaKnown RBP15.15■□□□□ 0.02
SOX17-201ENST00000297316 DEFB130BP0DP73 79 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms