RNA–Protein interactions for RNA: ENST00000293406.7

LSM12-201, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-201ENST00000293406 VSIG2Q96IQ7 327 aa13.99□□□□□ -0.17
LSM12-201ENST00000293406 SPANXA1Q9NS26 97 aa13.99□□□□□ -0.17
LSM12-201ENST00000293406 VPREB3Q9UKI3 123 aa13.99□□□□□ -0.17
LSM12-201ENST00000293406 ADAMTSL4-AS1Q5T5F5 129 aa13.98□□□□□ -0.17
LSM12-201ENST00000293406 NRGNQ92686 78 aa13.98□□□□□ -0.17
LSM12-201ENST00000293406 SPANXDQ9BXN6 97 aa13.98□□□□□ -0.17
LSM12-201ENST00000293406 SPANXCQ9NY87 97 aa13.98□□□□□ -0.17
LSM12-201ENST00000293406 H3BMM0 161 aa13.98□□□□□ -0.17
LSM12-201ENST00000293406 Q5PR19 223 aa13.98□□□□□ -0.17
LSM12-201ENST00000293406 Q6ZSN1 163 aa13.98□□□□□ -0.17
LSM12-201ENST00000293406 NTN5Q8WTR8 489 aaPredicted RBP13.98□□□□□ -0.17
LSM12-201ENST00000293406 CHCHD7Q9BUK0 85 aa13.98□□□□□ -0.17
LSM12-201ENST00000293406 UBE2D4Q9Y2X8 147 aa13.98□□□□□ -0.17
LSM12-201ENST00000293406 ZNF415Q09FC8 603 aa13.97□□□□□ -0.17
LSM12-201ENST00000293406 RBMY1BA6NDE4 496 aaKnown RBP13.97□□□□□ -0.17
LSM12-201ENST00000293406 RBMY1EA6NEQ0 496 aaKnown RBP13.97□□□□□ -0.17
LSM12-201ENST00000293406 RBMY1DP0C7P1 496 aaKnown RBP13.97□□□□□ -0.17
LSM12-201ENST00000293406 ZNF702PQ9H963 129 aa13.97□□□□□ -0.17
LSM12-201ENST00000293406 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.96□□□□□ -0.17
LSM12-201ENST00000293406 IGKV2-29A2NJV5 120 aaPredicted RBP13.96□□□□□ -0.17
LSM12-201ENST00000293406 SLURP1P55000 103 aa13.96□□□□□ -0.17
LSM12-201ENST00000293406 MIAQ16674 131 aa13.96□□□□□ -0.17
LSM12-201ENST00000293406 A8MTW9 85 aa13.96□□□□□ -0.18
LSM12-201ENST00000293406 A8MZ25 164 aa13.96□□□□□ -0.18
LSM12-201ENST00000293406 PIK3CD-AS1Q5SR53 167 aa13.96□□□□□ -0.18
LSM12-201ENST00000293406 PRRC2AP48634 2157 aaKnown RBP13.95□□□□□ -0.18
LSM12-201ENST00000293406 TRAV26-1A0A087WT03 109 aa13.95□□□□□ -0.18
LSM12-201ENST00000293406 TRBV10-2A0A0K0K1G8 114 aa13.95□□□□□ -0.18
LSM12-201ENST00000293406 J3QLI3 93 aa13.95□□□□□ -0.18
LSM12-201ENST00000293406 DEFB136Q30KP8 78 aa13.95□□□□□ -0.18
LSM12-201ENST00000293406 ICOSQ9Y6W8 199 aa13.95□□□□□ -0.18
LSM12-201ENST00000293406 NPC2P61916 151 aa13.94□□□□□ -0.18
LSM12-201ENST00000293406 MAPK1IP1LQ8NDC0 245 aa13.94□□□□□ -0.18
LSM12-201ENST00000293406 LINC00467Q9BRT7 94 aa13.94□□□□□ -0.18
LSM12-201ENST00000293406 ZFAND6Q6FIF0 208 aa13.93□□□□□ -0.18
LSM12-201ENST00000293406 LINC01600Q96MT4 127 aa13.93□□□□□ -0.18
LSM12-201ENST00000293406 C18orf65Q6ZTR6 163 aa13.93□□□□□ -0.18
LSM12-201ENST00000293406 IGHV3-38A0A0C4DH36 116 aa13.92□□□□□ -0.18
LSM12-201ENST00000293406 TEX29Q8N6K0 151 aa13.92□□□□□ -0.18
LSM12-201ENST00000293406 TEX49A0A1B0GTD5 131 aa13.92□□□□□ -0.18
LSM12-201ENST00000293406 COX6CP09669 75 aa13.92□□□□□ -0.18
LSM12-201ENST00000293406 RPL13AP40429 203 aaKnown RBP13.92□□□□□ -0.18
LSM12-201ENST00000293406 LINC01587Q99440 93 aa13.92□□□□□ -0.18
LSM12-201ENST00000293406 Q6YL49 198 aa13.91□□□□□ -0.18
LSM12-201ENST00000293406 DNAJC30Q96LL9 226 aa13.91□□□□□ -0.18
LSM12-201ENST00000293406 YAE1D1Q9NRH1 226 aa13.91□□□□□ -0.18
LSM12-201ENST00000293406 CREBBPQ92793 2442 aa13.91□□□□□ -0.18
LSM12-201ENST00000293406 IGHV3-53P01767 116 aa13.91□□□□□ -0.18
LSM12-201ENST00000293406 Q6ZSV7 163 aa13.91□□□□□ -0.18
LSM12-201ENST00000293406 TMEM61Q8N0U2 210 aa13.91□□□□□ -0.18
LSM12-201ENST00000293406 CITED1Q99966 193 aa13.91□□□□□ -0.18
LSM12-201ENST00000293406 NACAE9PAV3 2078 aa13.91□□□□□ -0.18
LSM12-201ENST00000293406 A0A096LNT2 108 aa13.9□□□□□ -0.18
LSM12-201ENST00000293406 C2orf82Q6UX34 121 aa13.9□□□□□ -0.18
LSM12-201ENST00000293406 C11orf72Q8NBR9 251 aa13.9□□□□□ -0.18
LSM12-201ENST00000293406 UBE2WQ96B02 151 aa13.9□□□□□ -0.18
LSM12-201ENST00000293406 CDKN2A-AS1Q9UH64 79 aa13.9□□□□□ -0.18
LSM12-201ENST00000293406 RNF183Q96D59 192 aa13.89□□□□□ -0.19
LSM12-201ENST00000293406 CSMD2Q7Z408 3487 aa13.89□□□□□ -0.19
LSM12-201ENST00000293406 TIMM17BO60830 172 aa13.89□□□□□ -0.19
LSM12-201ENST00000293406 ANAPC13Q9BS18 74 aa13.89□□□□□ -0.19
LSM12-201ENST00000293406 PEMTQ9UBM1 199 aa13.89□□□□□ -0.19
LSM12-201ENST00000293406 H7C423 109 aa13.88□□□□□ -0.19
LSM12-201ENST00000293406 SNCGO76070 127 aa13.88□□□□□ -0.19
LSM12-201ENST00000293406 MAP6D1Q9H9H5 199 aa13.88□□□□□ -0.19
LSM12-201ENST00000293406 TRAV8-4A0A0B4J246 113 aa13.87□□□□□ -0.19
LSM12-201ENST00000293406 IFITM1P13164 125 aa13.87□□□□□ -0.19
LSM12-201ENST00000293406 CLUHP3Q96NS8 147 aa13.87□□□□□ -0.19
LSM12-201ENST00000293406 DOPEY1Q5JWR5 2465 aa13.87□□□□□ -0.19
LSM12-201ENST00000293406 BEAN1Q3B7T3 259 aa13.87□□□□□ -0.19
LSM12-201ENST00000293406 DGAT2L7PQ6IED9 249 aa13.87□□□□□ -0.19
LSM12-201ENST00000293406 CFAP46Q8IYW2 2715 aa13.86□□□□□ -0.19
LSM12-201ENST00000293406 TIRAPP58753 221 aa13.86□□□□□ -0.19
LSM12-201ENST00000293406 DAND5Q8N907 189 aa13.86□□□□□ -0.19
LSM12-201ENST00000293406 CLEC2BQ92478 149 aa13.86□□□□□ -0.19
LSM12-201ENST00000293406 H3BT86 120 aa13.86□□□□□ -0.19
LSM12-201ENST00000293406 NDUFA1O15239 70 aa13.86□□□□□ -0.19
LSM12-201ENST00000293406 INSP01308 110 aa13.86□□□□□ -0.19
LSM12-201ENST00000293406 TMEM101Q96IK0 257 aa13.86□□□□□ -0.19
LSM12-201ENST00000293406 IGLV5-45A0A087WSX0 123 aa13.85□□□□□ -0.19
LSM12-201ENST00000293406 RS1O15537 224 aa13.85□□□□□ -0.19
LSM12-201ENST00000293406 GAGE2BQ13066 116 aa13.85□□□□□ -0.19
LSM12-201ENST00000293406 GAGE2EQ4V326 116 aa13.85□□□□□ -0.19
LSM12-201ENST00000293406 DYNLRB2Q8TF09 96 aa13.85□□□□□ -0.19
LSM12-201ENST00000293406 GAGE2DQ9UEU5 116 aa13.85□□□□□ -0.19
LSM12-201ENST00000293406 FLNCQ14315 2725 aa13.85□□□□□ -0.19
LSM12-201ENST00000293406 FSHBP01225 129 aa13.85□□□□□ -0.19
LSM12-201ENST00000293406 TRAV4A0A0B4J268 109 aa13.84□□□□□ -0.19
LSM12-201ENST00000293406 LST1O00453 97 aa13.84□□□□□ -0.19
LSM12-201ENST00000293406 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.84□□□□□ -0.19
LSM12-201ENST00000293406 PKD1L2Q7Z442 2459 aa13.84□□□□□ -0.19
LSM12-201ENST00000293406 CRLF1O75462 422 aa13.84□□□□□ -0.19
LSM12-201ENST00000293406 CIRBPQ14011 172 aaKnown RBP13.84□□□□□ -0.19
LSM12-201ENST00000293406 KHDC1LQ5JSQ8 128 aa13.83□□□□□ -0.2
LSM12-201ENST00000293406 ZANQ9Y493 2812 aa13.83□□□□□ -0.2
LSM12-201ENST00000293406 COX6A2Q02221 97 aa13.82□□□□□ -0.2
LSM12-201ENST00000293406 USP9XQ93008 2570 aaPredicted RBP13.82□□□□□ -0.2
LSM12-201ENST00000293406 UTP20O75691 2785 aaKnown RBP13.82□□□□□ -0.2
LSM12-201ENST00000293406 IGHV3OR16-12A0A075B7B8 117 aa13.81□□□□□ -0.2
LSM12-201ENST00000293406 C4orf3Q8WVX3 66 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms