RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 TRGC1P0CF51 173 aa6.08□□□□□ -1.44
HMGN1-201ENST00000288344 CEBPGP53567 150 aa6.08□□□□□ -1.44
HMGN1-201ENST00000288344 TWIST1Q15672 202 aa6.08□□□□□ -1.44
HMGN1-201ENST00000288344 IQCJQ1A5X6 159 aa6.08□□□□□ -1.44
HMGN1-201ENST00000288344 LCE4AQ5TA78 99 aa6.08□□□□□ -1.44
HMGN1-201ENST00000288344 KRTAP26-1Q6PEX3 210 aa6.08□□□□□ -1.44
HMGN1-201ENST00000288344 RASL11AQ6T310 242 aa6.08□□□□□ -1.44
HMGN1-201ENST00000288344 PGLYRP4Q96LB8 373 aa6.08□□□□□ -1.44
HMGN1-201ENST00000288344 CHCHD7Q9BUK0 85 aa6.08□□□□□ -1.44
HMGN1-201ENST00000288344 TRBV6-5A0A0K0K1A5 114 aa6.07□□□□□ -1.44
HMGN1-201ENST00000288344 F5H697 171 aa6.07□□□□□ -1.44
HMGN1-201ENST00000288344 IGHV3-30P01768 117 aa6.07□□□□□ -1.44
HMGN1-201ENST00000288344 IGHV3-33P01772 117 aa6.07□□□□□ -1.44
HMGN1-201ENST00000288344 IGHV3-30-3P0DP02 117 aa6.07□□□□□ -1.44
HMGN1-201ENST00000288344 IGHV3-30-5P0DP03 117 aa6.07□□□□□ -1.44
HMGN1-201ENST00000288344 ENHOQ6UWT2 76 aa6.07□□□□□ -1.44
HMGN1-201ENST00000288344 TMEM191AQ9H0A3 160 aa6.07□□□□□ -1.44
HMGN1-201ENST00000288344 PRR34Q9NV39 138 aa6.07□□□□□ -1.44
HMGN1-201ENST00000288344 TRAV26-2A0A0B4J265 109 aa6.06□□□□□ -1.44
HMGN1-201ENST00000288344 A0A1B0GUT8 65 aa6.06□□□□□ -1.44
HMGN1-201ENST00000288344 SMIM17P0DL12 118 aa6.06□□□□□ -1.44
HMGN1-201ENST00000288344 RAB4AP20338 218 aa6.06□□□□□ -1.44
HMGN1-201ENST00000288344 POLR2KP53803 58 aaKnown RBP6.06□□□□□ -1.44
HMGN1-201ENST00000288344 WFDC2Q14508 124 aa6.06□□□□□ -1.44
HMGN1-201ENST00000288344 SPATA12Q7Z6I5 190 aa6.06□□□□□ -1.44
HMGN1-201ENST00000288344 A0A1B0GXF2 115 aa6.05□□□□□ -1.44
HMGN1-201ENST00000288344 H7C1H1 209 aa6.05□□□□□ -1.44
HMGN1-201ENST00000288344 TNFRSF6BO95407 300 aa6.05□□□□□ -1.44
HMGN1-201ENST00000288344 MPV17L2Q567V2 206 aa6.05□□□□□ -1.44
HMGN1-201ENST00000288344 TMEM97Q5BJF2 176 aa6.05□□□□□ -1.44
HMGN1-201ENST00000288344 RPL39LQ96EH5 51 aaKnown RBP6.05□□□□□ -1.44
HMGN1-201ENST00000288344 VPS13BQ7Z7G8 4022 aa6.04□□□□□ -1.44
HMGN1-201ENST00000288344 TRAV8-3A0A0A6YYJ7 113 aa6.04□□□□□ -1.44
HMGN1-201ENST00000288344 A0A1B0GUV1 79 aa6.04□□□□□ -1.44
HMGN1-201ENST00000288344 KRTAP23-1A1A580 65 aa6.04□□□□□ -1.44
HMGN1-201ENST00000288344 MGPP08493 103 aa6.04□□□□□ -1.44
HMGN1-201ENST00000288344 ADCYAP1P18509 176 aa6.04□□□□□ -1.44
HMGN1-201ENST00000288344 FUSP35637 526 aaKnown RBP eCLIP6.04□□□□□ -1.44
HMGN1-201ENST00000288344 RPS10P46783 165 aaKnown RBP6.04□□□□□ -1.44
HMGN1-201ENST00000288344 ADIRFQ15847 76 aa6.04□□□□□ -1.44
HMGN1-201ENST00000288344 C15orf54Q8N8G6 183 aa6.04□□□□□ -1.44
HMGN1-201ENST00000288344 NRACQ8N912 160 aa6.04□□□□□ -1.44
HMGN1-201ENST00000288344 C20orf203Q8NBC4 194 aa6.04□□□□□ -1.44
HMGN1-201ENST00000288344 KRTAP4-9Q9BYQ8 210 aa6.04□□□□□ -1.44
HMGN1-201ENST00000288344 KLK12Q9UKR0 248 aa6.04□□□□□ -1.44
HMGN1-201ENST00000288344 CDK2AP2O75956 126 aa6.03□□□□□ -1.44
HMGN1-201ENST00000288344 ESDP10768 282 aa6.03□□□□□ -1.44
HMGN1-201ENST00000288344 RBX1P62877 108 aa6.03□□□□□ -1.44
HMGN1-201ENST00000288344 AMN1Q8IY45 258 aa6.03□□□□□ -1.44
HMGN1-201ENST00000288344 Q8N976 141 aa6.03□□□□□ -1.44
HMGN1-201ENST00000288344 NAT8BQ9UHF3 227 aa6.03□□□□□ -1.44
HMGN1-201ENST00000288344 IGLV4-60A0A075B6I1 120 aa6.02□□□□□ -1.45
HMGN1-201ENST00000288344 TRBV24-1A0A075B6N3 115 aa6.02□□□□□ -1.45
HMGN1-201ENST00000288344 TRBV27A0A0K0K1C4 114 aa6.02□□□□□ -1.45
HMGN1-201ENST00000288344 C16orf90A8MZG2 172 aa6.02□□□□□ -1.45
HMGN1-201ENST00000288344 XGP55808 180 aa6.02□□□□□ -1.45
HMGN1-201ENST00000288344 C10orf91Q5T1B1 145 aa6.02□□□□□ -1.45
HMGN1-201ENST00000288344 FAM104BQ5XKR9 115 aa6.02□□□□□ -1.45
HMGN1-201ENST00000288344 KRTAP4-5Q9BYR2 181 aa6.02□□□□□ -1.45
HMGN1-201ENST00000288344 TRBV25-1A0A075B6N4 114 aa6.01□□□□□ -1.45
HMGN1-201ENST00000288344 IGHV1-24A0A0C4DH33 117 aa6.01□□□□□ -1.45
HMGN1-201ENST00000288344 TMEM218A2RU14 115 aa6.01□□□□□ -1.45
HMGN1-201ENST00000288344 LINC00862A6NCI5 91 aa6.01□□□□□ -1.45
HMGN1-201ENST00000288344 SDHAF1A6NFY7 115 aa6.01□□□□□ -1.45
HMGN1-201ENST00000288344 KRTAP10-1P60331 282 aa6.01□□□□□ -1.45
HMGN1-201ENST00000288344 RAB14P61106 215 aa6.01□□□□□ -1.45
HMGN1-201ENST00000288344 PNRC1Q12796 327 aaPredicted RBP6.01□□□□□ -1.45
HMGN1-201ENST00000288344 RIGQ13278 110 aa6.01□□□□□ -1.45
HMGN1-201ENST00000288344 UQCC3Q6UW78 93 aa6.01□□□□□ -1.45
HMGN1-201ENST00000288344 Q8N814 137 aa6.01□□□□□ -1.45
HMGN1-201ENST00000288344 DEFB104AQ8WTQ1 72 aa6.01□□□□□ -1.45
HMGN1-201ENST00000288344 NTN5Q8WTR8 489 aaPredicted RBP6.01□□□□□ -1.45
HMGN1-201ENST00000288344 TMEM70Q9BUB7 260 aa6.01□□□□□ -1.45
HMGN1-201ENST00000288344 Q9HAA7 133 aa6.01□□□□□ -1.45
HMGN1-201ENST00000288344 A0A087WX48 190 aa6□□□□□ -1.45
HMGN1-201ENST00000288344 NCR2O95944 276 aa6□□□□□ -1.45
HMGN1-201ENST00000288344 TSHBP01222 138 aa6□□□□□ -1.45
HMGN1-201ENST00000288344 GAGE6Q13070 117 aa6□□□□□ -1.45
HMGN1-201ENST00000288344 ELOBQ15370 118 aa6□□□□□ -1.45
HMGN1-201ENST00000288344 MRPL51Q4U2R6 128 aaKnown RBP6□□□□□ -1.45
HMGN1-201ENST00000288344 FAM104AQ969W3 186 aa6□□□□□ -1.45
HMGN1-201ENST00000288344 UBE2WQ96B02 151 aa6□□□□□ -1.45
HMGN1-201ENST00000288344 MRAP2Q96G30 205 aa6□□□□□ -1.45
HMGN1-201ENST00000288344 CHCHD5Q9BSY4 110 aa6□□□□□ -1.45
HMGN1-201ENST00000288344 TM2D2Q9BX73 214 aa6□□□□□ -1.45
HMGN1-201ENST00000288344 A0A1B0GW15 77 aa5.99□□□□□ -1.45
HMGN1-201ENST00000288344 KRTAP9-7A8MTY7 169 aa5.99□□□□□ -1.45
HMGN1-201ENST00000288344 TMEM262E9PQX1 116 aa5.99□□□□□ -1.45
HMGN1-201ENST00000288344 RPL32P62910 135 aaKnown RBP5.99□□□□□ -1.45
HMGN1-201ENST00000288344 Q0VG73 95 aa5.99□□□□□ -1.45
HMGN1-201ENST00000288344 LINC00269Q8N2A0 174 aa5.99□□□□□ -1.45
HMGN1-201ENST00000288344 TMEM243Q9BU79 118 aa5.99□□□□□ -1.45
HMGN1-201ENST00000288344 COX11Q9Y6N1 276 aa5.99□□□□□ -1.45
HMGN1-201ENST00000288344 PRSS47A8MTI9 375 aa5.99□□□□□ -1.45
HMGN1-201ENST00000288344 SMKR1H3BMG3 65 aa5.99□□□□□ -1.45
HMGN1-201ENST00000288344 H7C423 109 aa5.99□□□□□ -1.45
HMGN1-201ENST00000288344 I3L3M4 83 aa5.99□□□□□ -1.45
HMGN1-201ENST00000288344 PKIAP61925 76 aa5.99□□□□□ -1.45
HMGN1-201ENST00000288344 COTL1Q14019 142 aa5.99□□□□□ -1.45
HMGN1-201ENST00000288344 MIAQ16674 131 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms