RNA–Protein interactions for RNA: ENST00000285106.10

CXXC1-201, Transcript of CXXC finger protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXXC1, Length 2,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-201ENST00000285106 GAGE2DQ9UEU5 116 aa12.31□□□□□ -0.44
CXXC1-201ENST00000285106 MYO9AB2RTY4 2548 aa12.31□□□□□ -0.44
CXXC1-201ENST00000285106 A0A0J9YX75 114 aa12.31□□□□□ -0.44
CXXC1-201ENST00000285106 ADARB2-AS1A8MUL3 147 aa12.31□□□□□ -0.44
CXXC1-201ENST00000285106 A0A0J9YXY3 114 aa12.3□□□□□ -0.44
CXXC1-201ENST00000285106 M0R2P5 195 aa12.3□□□□□ -0.44
CXXC1-201ENST00000285106 TRIAP1O43715 76 aa12.3□□□□□ -0.44
CXXC1-201ENST00000285106 RHOHQ15669 191 aa12.3□□□□□ -0.44
CXXC1-201ENST00000285106 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.3□□□□□ -0.44
CXXC1-201ENST00000285106 NDUFV3P56181 108 aaKnown RBP12.3□□□□□ -0.44
CXXC1-201ENST00000285106 SPINK13Q1W4C9 94 aa12.3□□□□□ -0.44
CXXC1-201ENST00000285106 C20orf203Q8NBC4 194 aa12.3□□□□□ -0.44
CXXC1-201ENST00000285106 C9orf85Q96MD7 179 aa12.3□□□□□ -0.44
CXXC1-201ENST00000285106 IGHV3-16A0A0C4DH30 117 aa12.29□□□□□ -0.44
CXXC1-201ENST00000285106 K7EQG2 157 aa12.29□□□□□ -0.44
CXXC1-201ENST00000285106 IGLV4-3A0A075B6K6 122 aa12.29□□□□□ -0.44
CXXC1-201ENST00000285106 A0A096LNT2 108 aa12.29□□□□□ -0.44
CXXC1-201ENST00000285106 TMEM89A2RUT3 159 aa12.29□□□□□ -0.44
CXXC1-201ENST00000285106 PRB1P04280 392 aa12.29□□□□□ -0.44
CXXC1-201ENST00000285106 J3QLI3 93 aa12.28□□□□□ -0.44
CXXC1-201ENST00000285106 ODF3Q96PU9 254 aa12.28□□□□□ -0.44
CXXC1-201ENST00000285106 VPREB3Q9UKI3 123 aa12.28□□□□□ -0.44
CXXC1-201ENST00000285106 RPL13AP40429 203 aaKnown RBP12.27□□□□□ -0.44
CXXC1-201ENST00000285106 LITAFQ99732 161 aa12.27□□□□□ -0.44
CXXC1-201ENST00000285106 TRBV30A0A0K0K1B3 111 aa12.27□□□□□ -0.45
CXXC1-201ENST00000285106 TRBV10-2A0A0K0K1G8 114 aa12.27□□□□□ -0.45
CXXC1-201ENST00000285106 IGHV3-30-3P0DP02 117 aa12.27□□□□□ -0.45
CXXC1-201ENST00000285106 HOXD3P31249 432 aaPredicted RBP12.27□□□□□ -0.45
CXXC1-201ENST00000285106 SPXQ9BT56 116 aa12.27□□□□□ -0.45
CXXC1-201ENST00000285106 TLN2Q9Y4G6 2542 aa12.27□□□□□ -0.45
CXXC1-201ENST00000285106 LINC01600Q96MT4 127 aa12.26□□□□□ -0.45
CXXC1-201ENST00000285106 USP24Q9UPU5 2620 aa12.25□□□□□ -0.45
CXXC1-201ENST00000285106 IGHV1OR15-1A0A075B7D0 117 aa12.25□□□□□ -0.45
CXXC1-201ENST00000285106 TRAV8-4A0A0B4J246 113 aa12.25□□□□□ -0.45
CXXC1-201ENST00000285106 TEX15Q9BXT5 2789 aa12.25□□□□□ -0.45
CXXC1-201ENST00000285106 TRAV8-3A0A0A6YYJ7 113 aa12.25□□□□□ -0.45
CXXC1-201ENST00000285106 H3BMM0 161 aa12.25□□□□□ -0.45
CXXC1-201ENST00000285106 CCDC179H3BU77 68 aa12.25□□□□□ -0.45
CXXC1-201ENST00000285106 UBE2WQ96B02 151 aa12.25□□□□□ -0.45
CXXC1-201ENST00000285106 I3L3M4 83 aa12.24□□□□□ -0.45
CXXC1-201ENST00000285106 PRSS2P07478 247 aa12.24□□□□□ -0.45
CXXC1-201ENST00000285106 ZNF702PQ9H963 129 aa12.24□□□□□ -0.45
CXXC1-201ENST00000285106 IFITM1P13164 125 aa12.24□□□□□ -0.45
CXXC1-201ENST00000285106 TTC32Q5I0X7 151 aa12.24□□□□□ -0.45
CXXC1-201ENST00000285106 ADAMTSL4-AS1Q5T5F5 129 aa12.24□□□□□ -0.45
CXXC1-201ENST00000285106 C15orf53Q8NAA6 179 aa12.24□□□□□ -0.45
CXXC1-201ENST00000285106 TIMM21Q9BVV7 248 aa12.24□□□□□ -0.45
CXXC1-201ENST00000285106 Q6YL49 198 aa12.24□□□□□ -0.45
CXXC1-201ENST00000285106 Q6ZSV7 163 aa12.24□□□□□ -0.45
CXXC1-201ENST00000285106 FAM104AQ969W3 186 aa12.24□□□□□ -0.45
CXXC1-201ENST00000285106 UBE2E2Q96LR5 201 aa12.24□□□□□ -0.45
CXXC1-201ENST00000285106 PRRC2AP48634 2157 aaKnown RBP12.23□□□□□ -0.45
CXXC1-201ENST00000285106 ICOSQ9Y6W8 199 aa12.23□□□□□ -0.45
CXXC1-201ENST00000285106 C2orf82Q6UX34 121 aa12.23□□□□□ -0.45
CXXC1-201ENST00000285106 H7C423 109 aa12.22□□□□□ -0.45
CXXC1-201ENST00000285106 HTN1P15515 57 aa12.22□□□□□ -0.45
CXXC1-201ENST00000285106 DEFB136Q30KP8 78 aa12.22□□□□□ -0.45
CXXC1-201ENST00000285106 CEMP1Q6PRD7 247 aaPredicted RBP12.22□□□□□ -0.45
CXXC1-201ENST00000285106 Q6Q795 121 aa12.22□□□□□ -0.45
CXXC1-201ENST00000285106 GAGE12JA6NER3 117 aa12.22□□□□□ -0.45
CXXC1-201ENST00000285106 GAGE7O76087 117 aa12.22□□□□□ -0.45
CXXC1-201ENST00000285106 GAGE12FP0CL80 117 aa12.22□□□□□ -0.45
CXXC1-201ENST00000285106 GAGE12GP0CL81 117 aa12.22□□□□□ -0.45
CXXC1-201ENST00000285106 GAGE12IP0CL82 117 aa12.22□□□□□ -0.45
CXXC1-201ENST00000285106 CD28P10747 220 aa12.22□□□□□ -0.45
CXXC1-201ENST00000285106 GAGE4Q13068 117 aa12.22□□□□□ -0.45
CXXC1-201ENST00000285106 RNASE13Q5GAN3 156 aaKnown RBP12.22□□□□□ -0.45
CXXC1-201ENST00000285106 NPC2P61916 151 aa12.21□□□□□ -0.45
CXXC1-201ENST00000285106 IGHV4-31P0DP07 118 aa12.21□□□□□ -0.45
CXXC1-201ENST00000285106 C18orf65Q6ZTR6 163 aa12.21□□□□□ -0.45
CXXC1-201ENST00000285106 A8MZ25 164 aa12.21□□□□□ -0.46
CXXC1-201ENST00000285106 MRPS36P82909 103 aaKnown RBP12.21□□□□□ -0.46
CXXC1-201ENST00000285106 CLEC2BQ92478 149 aa12.21□□□□□ -0.46
CXXC1-201ENST00000285106 KNCNA6PVL3 124 aa12.2□□□□□ -0.46
CXXC1-201ENST00000285106 SLURP1P55000 103 aa12.2□□□□□ -0.46
CXXC1-201ENST00000285106 NDUFA12Q9UI09 145 aa12.2□□□□□ -0.46
CXXC1-201ENST00000285106 KRTAP10-9P60411 292 aa12.2□□□□□ -0.46
CXXC1-201ENST00000285106 FSHBP01225 129 aa12.19□□□□□ -0.46
CXXC1-201ENST00000285106 IGHV1-58A0A0C4DH39 117 aa12.19□□□□□ -0.46
CXXC1-201ENST00000285106 SONP18583 2426 aaKnown RBP12.19□□□□□ -0.46
CXXC1-201ENST00000285106 DEFB131AP59861 70 aa12.18□□□□□ -0.46
CXXC1-201ENST00000285106 SPANXDQ9BXN6 97 aa12.18□□□□□ -0.46
CXXC1-201ENST00000285106 SPANXCQ9NY87 97 aa12.18□□□□□ -0.46
CXXC1-201ENST00000285106 IGHV3-73A0A0B4J1V6 119 aa12.18□□□□□ -0.46
CXXC1-201ENST00000285106 MIAQ16674 131 aa12.17□□□□□ -0.46
CXXC1-201ENST00000285106 BBC3Q96PG8 261 aaPredicted RBP12.17□□□□□ -0.46
CXXC1-201ENST00000285106 PYGO1Q9Y3Y4 419 aa12.17□□□□□ -0.46
CXXC1-201ENST00000285106 TRGV11A0A075B6L2 103 aa12.17□□□□□ -0.46
CXXC1-201ENST00000285106 H3BT86 120 aa12.17□□□□□ -0.46
CXXC1-201ENST00000285106 DUX3Q96PT4 197 aa12.17□□□□□ -0.46
CXXC1-201ENST00000285106 RBMY1A1P0DJD3 496 aaKnown RBP12.17□□□□□ -0.46
CXXC1-201ENST00000285106 RBMY1CP0DJD4 496 aa12.17□□□□□ -0.46
CXXC1-201ENST00000285106 PROK1P58294 105 aa12.17□□□□□ -0.46
CXXC1-201ENST00000285106 RBMY1FQ15415 496 aaKnown RBP12.17□□□□□ -0.46
CXXC1-201ENST00000285106 KHDC1LQ5JSQ8 128 aa12.17□□□□□ -0.46
CXXC1-201ENST00000285106 COX6CP09669 75 aa12.16□□□□□ -0.46
CXXC1-201ENST00000285106 RNF152Q8N8N0 203 aa12.16□□□□□ -0.46
CXXC1-201ENST00000285106 VSIG2Q96IQ7 327 aa12.16□□□□□ -0.46
CXXC1-201ENST00000285106 TMEM61Q8N0U2 210 aa12.16□□□□□ -0.46
CXXC1-201ENST00000285106 UBR5O95071 2799 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms