RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 MXRA5Q9NR99 2828 aa18.28■□□□□ 0.52
ROM1-201ENST00000278833 INAFM1C9JVW0 142 aa18.28■□□□□ 0.52
ROM1-201ENST00000278833 DUX3Q96PT4 197 aa18.28■□□□□ 0.52
ROM1-201ENST00000278833 SPXQ9BT56 116 aa18.28■□□□□ 0.52
ROM1-201ENST00000278833 IGHV3-30P01768 117 aa18.27■□□□□ 0.52
ROM1-201ENST00000278833 IGHV3-30-5P0DP03 117 aa18.27■□□□□ 0.52
ROM1-201ENST00000278833 ZNF22P17026 224 aaPredicted RBP18.27■□□□□ 0.52
ROM1-201ENST00000278833 DEFB114Q30KQ6 69 aa18.27■□□□□ 0.52
ROM1-201ENST00000278833 TRAV25A0A0B4J276 109 aa18.26■□□□□ 0.51
ROM1-201ENST00000278833 LGALS3P17931 250 aaKnown RBP18.26■□□□□ 0.51
ROM1-201ENST00000278833 BEAN1Q3B7T3 259 aa18.26■□□□□ 0.51
ROM1-201ENST00000278833 PRO0461Q9UI25 63 aa18.26■□□□□ 0.51
ROM1-201ENST00000278833 C11orf72Q8NBR9 251 aa18.26■□□□□ 0.51
ROM1-201ENST00000278833 DYNLRB2Q8TF09 96 aa18.26■□□□□ 0.51
ROM1-201ENST00000278833 RAX2Q96IS3 184 aa18.26■□□□□ 0.51
ROM1-201ENST00000278833 DNAJC30Q96LL9 226 aa18.26■□□□□ 0.51
ROM1-201ENST00000278833 PGPEP1Q9NXJ5 209 aa18.26■□□□□ 0.51
ROM1-201ENST00000278833 SETD2Q9BYW2 2564 aaPredicted RBP18.26■□□□□ 0.51
ROM1-201ENST00000278833 CUBNO60494 3623 aa18.25■□□□□ 0.51
ROM1-201ENST00000278833 VCX2Q9H322 139 aa18.25■□□□□ 0.51
ROM1-201ENST00000278833 DEFB104AQ8WTQ1 72 aa18.24■□□□□ 0.51
ROM1-201ENST00000278833 INSP01308 110 aa18.24■□□□□ 0.51
ROM1-201ENST00000278833 UBE2D3P61077 147 aa18.24■□□□□ 0.51
ROM1-201ENST00000278833 UBE2D2P62837 147 aa18.24■□□□□ 0.51
ROM1-201ENST00000278833 LYRM7Q5U5X0 104 aa18.24■□□□□ 0.51
ROM1-201ENST00000278833 OPRPNQ99935 248 aaPredicted RBP18.24■□□□□ 0.51
ROM1-201ENST00000278833 MRPS36P82909 103 aaKnown RBP18.23■□□□□ 0.51
ROM1-201ENST00000278833 FAM104AQ969W3 186 aa18.23■□□□□ 0.51
ROM1-201ENST00000278833 SPANXA1Q9NS26 97 aa18.23■□□□□ 0.51
ROM1-201ENST00000278833 MRPL16Q9NX20 251 aaKnown RBP18.23■□□□□ 0.51
ROM1-201ENST00000278833 NACAE9PAV3 2078 aa18.23■□□□□ 0.51
ROM1-201ENST00000278833 CFAP126Q5VTH2 177 aa18.22■□□□□ 0.51
ROM1-201ENST00000278833 NDUFA11Q86Y39 141 aa18.22■□□□□ 0.51
ROM1-201ENST00000278833 TNFRSF18Q9Y5U5 241 aa18.22■□□□□ 0.51
ROM1-201ENST00000278833 TEX48A0A1B0GUV7 120 aa18.22■□□□□ 0.51
ROM1-201ENST00000278833 TSPAN13O95857 204 aa18.22■□□□□ 0.51
ROM1-201ENST00000278833 H3BMG7 143 aa18.21■□□□□ 0.51
ROM1-201ENST00000278833 IGHV3-53P01767 116 aa18.21■□□□□ 0.51
ROM1-201ENST00000278833 FHL3Q13643 280 aa18.21■□□□□ 0.51
ROM1-201ENST00000278833 GAGE13Q4V321 117 aa18.21■□□□□ 0.51
ROM1-201ENST00000278833 RS1O15537 224 aa18.2■□□□□ 0.5
ROM1-201ENST00000278833 Q6ZSV7 163 aa18.2■□□□□ 0.5
ROM1-201ENST00000278833 C21orf62-AS1Q17RA5 79 aa18.2■□□□□ 0.5
ROM1-201ENST00000278833 CD28P10747 220 aa18.19■□□□□ 0.5
ROM1-201ENST00000278833 CHCHD7Q9BUK0 85 aa18.19■□□□□ 0.5
ROM1-201ENST00000278833 A0A0J9YXV3 536 aa18.18■□□□□ 0.5
ROM1-201ENST00000278833 WFDC2Q14508 124 aa18.18■□□□□ 0.5
ROM1-201ENST00000278833 RPL24P83731 157 aaKnown RBP18.18■□□□□ 0.5
ROM1-201ENST00000278833 IL17DQ8TAD2 202 aa18.18■□□□□ 0.5
ROM1-201ENST00000278833 NF1P21359 2839 aa18.17■□□□□ 0.5
ROM1-201ENST00000278833 CRLF1O75462 422 aa18.17■□□□□ 0.5
ROM1-201ENST00000278833 PROK1P58294 105 aa18.17■□□□□ 0.5
ROM1-201ENST00000278833 J3QR89 54 aa18.16■□□□□ 0.5
ROM1-201ENST00000278833 CFC1BP0CG36 223 aa18.16■□□□□ 0.5
ROM1-201ENST00000278833 CFC1P0CG37 223 aa18.16■□□□□ 0.5
ROM1-201ENST00000278833 COTL1Q14019 142 aa18.16■□□□□ 0.5
ROM1-201ENST00000278833 C10orf126Q8N4M7 172 aa18.16■□□□□ 0.5
ROM1-201ENST00000278833 LINC01587Q99440 93 aa18.16■□□□□ 0.5
ROM1-201ENST00000278833 KHDC1LQ5JSQ8 128 aa18.16■□□□□ 0.5
ROM1-201ENST00000278833 ATP6V0E2Q8NHE4 81 aa18.16■□□□□ 0.5
ROM1-201ENST00000278833 JMJD1CQ15652 2540 aa18.15■□□□□ 0.5
ROM1-201ENST00000278833 ODF3L2Q3SX64 289 aa18.15■□□□□ 0.5
ROM1-201ENST00000278833 UBE2D4Q9Y2X8 147 aa18.15■□□□□ 0.5
ROM1-201ENST00000278833 IGHV3-73A0A0B4J1V6 119 aa18.14■□□□□ 0.49
ROM1-201ENST00000278833 TINCRA0A1B0GVN0 87 aa18.14■□□□□ 0.49
ROM1-201ENST00000278833 TMEM238C9JI98 176 aa18.14■□□□□ 0.49
ROM1-201ENST00000278833 HTN1P15515 57 aa18.14■□□□□ 0.49
ROM1-201ENST00000278833 Q6ZSN1 163 aa18.14■□□□□ 0.49
ROM1-201ENST00000278833 A0A0B4J2C4 111 aa18.14■□□□□ 0.49
ROM1-201ENST00000278833 TRBV20-1A0A075B6N2 111 aa18.13■□□□□ 0.49
ROM1-201ENST00000278833 DNAJC9-AS1A6NH13 148 aa18.13■□□□□ 0.49
ROM1-201ENST00000278833 TIMM21Q9BVV7 248 aa18.13■□□□□ 0.49
ROM1-201ENST00000278833 APOMO95445 188 aa18.12■□□□□ 0.49
ROM1-201ENST00000278833 PRO1854Q9UHT4 67 aa18.12■□□□□ 0.49
ROM1-201ENST00000278833 IGHV1-58A0A0C4DH39 117 aa18.11■□□□□ 0.49
ROM1-201ENST00000278833 IGHV3-30-3P0DP02 117 aa18.11■□□□□ 0.49
ROM1-201ENST00000278833 SORL1Q92673 2214 aa18.09■□□□□ 0.49
ROM1-201ENST00000278833 A0A0J9YXY3 114 aa18.09■□□□□ 0.49
ROM1-201ENST00000278833 PRM2P04554 102 aa18.09■□□□□ 0.49
ROM1-201ENST00000278833 TRAV16A0A0A6YYK6 109 aaPredicted RBP18.08■□□□□ 0.49
ROM1-201ENST00000278833 ETDBQ3ZM63 59 aa18.08■□□□□ 0.49
ROM1-201ENST00000278833 SBSPONQ8IVN8 264 aa18.07■□□□□ 0.48
ROM1-201ENST00000278833 CMC4P56277 68 aaPredicted RBP18.07■□□□□ 0.48
ROM1-201ENST00000278833 STHQ8IWL8 128 aa18.07■□□□□ 0.48
ROM1-201ENST00000278833 C1orf158Q8N1D5 194 aa18.07■□□□□ 0.48
ROM1-201ENST00000278833 TMEM263Q8WUH6 116 aaKnown RBP18.07■□□□□ 0.48
ROM1-201ENST00000278833 IGLV5-45A0A087WSX0 123 aa18.06■□□□□ 0.48
ROM1-201ENST00000278833 A4D1N5 150 aa18.06■□□□□ 0.48
ROM1-201ENST00000278833 LITAFQ99732 161 aa18.06■□□□□ 0.48
ROM1-201ENST00000278833 SPANXDQ9BXN6 97 aa18.06■□□□□ 0.48
ROM1-201ENST00000278833 SPANXCQ9NY87 97 aa18.06■□□□□ 0.48
ROM1-201ENST00000278833 CCL24O00175 119 aa18.05■□□□□ 0.48
ROM1-201ENST00000278833 SMCPP49901 116 aaPredicted RBP18.05■□□□□ 0.48
ROM1-201ENST00000278833 SH2D6Q7Z4S9 175 aa18.05■□□□□ 0.48
ROM1-201ENST00000278833 VSIG2Q96IQ7 327 aa18.05■□□□□ 0.48
ROM1-201ENST00000278833 Q9UF83 564 aa18.05■□□□□ 0.48
ROM1-201ENST00000278833 LOC107984156A0A0G2JMH3 177 aa18.05■□□□□ 0.48
ROM1-201ENST00000278833 TIRAPP58753 221 aa18.05■□□□□ 0.48
ROM1-201ENST00000278833 ARL17AQ8IVW1 177 aa18.05■□□□□ 0.48
ROM1-201ENST00000278833 SPATA25Q9BR10 227 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms