RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 J3KT08 172 aa14.11□□□□□ -0.15
COL4A3BP-201ENST00000261415 A0A1B0GX51 115 aa14.1□□□□□ -0.15
COL4A3BP-201ENST00000261415 M0R2P5 195 aa14.1□□□□□ -0.15
COL4A3BP-201ENST00000261415 PRIMA1Q86XR5 153 aa14.1□□□□□ -0.15
COL4A3BP-201ENST00000261415 CFC1BP0CG36 223 aa14.1□□□□□ -0.15
COL4A3BP-201ENST00000261415 CFC1P0CG37 223 aa14.1□□□□□ -0.15
COL4A3BP-201ENST00000261415 CHCHD5Q9BSY4 110 aa14.1□□□□□ -0.15
COL4A3BP-201ENST00000261415 SMAD5-AS1Q9Y6J3 95 aa14.1□□□□□ -0.15
COL4A3BP-201ENST00000261415 TRBV7-7A0A0K0K1E9 115 aa14.09□□□□□ -0.15
COL4A3BP-201ENST00000261415 CCL24O00175 119 aa14.09□□□□□ -0.15
COL4A3BP-201ENST00000261415 NSUN5P1Q3KNT7 163 aa14.09□□□□□ -0.15
COL4A3BP-201ENST00000261415 KRTAP24-1Q3LI83 254 aa14.09□□□□□ -0.15
COL4A3BP-201ENST00000261415 C17orf77Q96MU5 243 aa14.09□□□□□ -0.15
COL4A3BP-201ENST00000261415 PRR25Q96S07 402 aa14.09□□□□□ -0.15
COL4A3BP-201ENST00000261415 GAS8-AS1O95177 125 aa14.08□□□□□ -0.15
COL4A3BP-201ENST00000261415 P0DMU3 169 aa14.08□□□□□ -0.15
COL4A3BP-201ENST00000261415 FAM231AP0DMU4 169 aa14.08□□□□□ -0.15
COL4A3BP-201ENST00000261415 FAM231CP0DMU5 169 aa14.08□□□□□ -0.15
COL4A3BP-201ENST00000261415 RHPN1-AS1Q9BWJ2 59 aa14.08□□□□□ -0.15
COL4A3BP-201ENST00000261415 FAM240AA0A1B0GVK7 77 aa14.08□□□□□ -0.16
COL4A3BP-201ENST00000261415 PDE6HQ13956 83 aa14.07□□□□□ -0.16
COL4A3BP-201ENST00000261415 ATXN8Q156A1 80 aa14.07□□□□□ -0.16
COL4A3BP-201ENST00000261415 BAALCQ8WXS3 180 aa14.07□□□□□ -0.16
COL4A3BP-201ENST00000261415 PLEKHB2Q96CS7 222 aa14.07□□□□□ -0.16
COL4A3BP-201ENST00000261415 IMUPQ9GZP8 106 aa14.07□□□□□ -0.16
COL4A3BP-201ENST00000261415 MSRB1Q9NZV6 116 aa14.07□□□□□ -0.16
COL4A3BP-201ENST00000261415 OR13C6PQ8NH95 151 aa14.06□□□□□ -0.16
COL4A3BP-201ENST00000261415 H3BMM0 161 aa14.06□□□□□ -0.16
COL4A3BP-201ENST00000261415 RPS28P62857 69 aaKnown RBP14.06□□□□□ -0.16
COL4A3BP-201ENST00000261415 UBE2WQ96B02 151 aa14.06□□□□□ -0.16
COL4A3BP-201ENST00000261415 PEMTQ9UBM1 199 aa14.06□□□□□ -0.16
COL4A3BP-201ENST00000261415 FBN1P35555 2871 aaKnown RBP14.05□□□□□ -0.16
COL4A3BP-201ENST00000261415 C9orf153Q5TBE3 101 aa14.05□□□□□ -0.16
COL4A3BP-201ENST00000261415 NEXN-AS1Q8NBZ9 246 aa14.05□□□□□ -0.16
COL4A3BP-201ENST00000261415 A0A0J9YY99 117 aa14.04□□□□□ -0.16
COL4A3BP-201ENST00000261415 IGHV3-30P01768 117 aa14.04□□□□□ -0.16
COL4A3BP-201ENST00000261415 IGHV3-30-5P0DP03 117 aa14.04□□□□□ -0.16
COL4A3BP-201ENST00000261415 GATA1P15976 413 aaPredicted RBP14.04□□□□□ -0.16
COL4A3BP-201ENST00000261415 C3orf22Q8N5N4 141 aa14.04□□□□□ -0.16
COL4A3BP-201ENST00000261415 TMEM101Q96IK0 257 aa14.04□□□□□ -0.16
COL4A3BP-201ENST00000261415 M0R3E3 92 aa14.04□□□□□ -0.16
COL4A3BP-201ENST00000261415 LINC01620Q4KN68 170 aa14.04□□□□□ -0.16
COL4A3BP-201ENST00000261415 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.04□□□□□ -0.16
COL4A3BP-201ENST00000261415 FAM19A5Q7Z5A7 132 aaPredicted RBP14.04□□□□□ -0.16
COL4A3BP-201ENST00000261415 TRBV10-2A0A0K0K1G8 114 aa14.03□□□□□ -0.16
COL4A3BP-201ENST00000261415 TRPT1Q86TN4 253 aaKnown RBP14.03□□□□□ -0.16
COL4A3BP-201ENST00000261415 SCGB3A1Q96QR1 104 aa14.03□□□□□ -0.16
COL4A3BP-201ENST00000261415 TEX49A0A1B0GTD5 131 aa14.03□□□□□ -0.16
COL4A3BP-201ENST00000261415 UQCRQO14949 82 aa14.03□□□□□ -0.16
COL4A3BP-201ENST00000261415 ORMDL2Q53FV1 153 aa14.03□□□□□ -0.16
COL4A3BP-201ENST00000261415 C3orf56Q8N813 242 aa14.02□□□□□ -0.16
COL4A3BP-201ENST00000261415 HERVK_113P61574 105 aa14.02□□□□□ -0.17
COL4A3BP-201ENST00000261415 LOC107984640A0A0U1RRK4 108 aa14.01□□□□□ -0.17
COL4A3BP-201ENST00000261415 RPL11P62913 178 aaKnown RBP14.01□□□□□ -0.17
COL4A3BP-201ENST00000261415 SLC25A29Q8N8R3 303 aa14.01□□□□□ -0.17
COL4A3BP-201ENST00000261415 NRACQ8N912 160 aa14.01□□□□□ -0.17
COL4A3BP-201ENST00000261415 TOMM6Q96B49 74 aa14.01□□□□□ -0.17
COL4A3BP-201ENST00000261415 OVOL1O14753 267 aa14.01□□□□□ -0.17
COL4A3BP-201ENST00000261415 ORM1P02763 201 aa14.01□□□□□ -0.17
COL4A3BP-201ENST00000261415 ZNF56Q15929 161 aa14.01□□□□□ -0.17
COL4A3BP-201ENST00000261415 PAPPA-AS1Q5QFB9 102 aa14.01□□□□□ -0.17
COL4A3BP-201ENST00000261415 ATP5G1P05496 136 aa14□□□□□ -0.17
COL4A3BP-201ENST00000261415 HERVK_113P63121 156 aa14□□□□□ -0.17
COL4A3BP-201ENST00000261415 SLC50A1Q9BRV3 221 aa14□□□□□ -0.17
COL4A3BP-201ENST00000261415 IGHV3-33P01772 117 aa13.99□□□□□ -0.17
COL4A3BP-201ENST00000261415 IGFL4Q6B9Z1 124 aa13.99□□□□□ -0.17
COL4A3BP-201ENST00000261415 LINC00526Q96FQ7 95 aa13.99□□□□□ -0.17
COL4A3BP-201ENST00000261415 IGKV3-7A0A075B6H7 116 aa13.99□□□□□ -0.17
COL4A3BP-201ENST00000261415 ZNF575Q86XF7 245 aa13.98□□□□□ -0.17
COL4A3BP-201ENST00000261415 VWFP04275 2813 aa13.98□□□□□ -0.17
COL4A3BP-201ENST00000261415 A0A0B4J2C4 111 aa13.98□□□□□ -0.17
COL4A3BP-201ENST00000261415 EMP1P54849 157 aa13.98□□□□□ -0.17
COL4A3BP-201ENST00000261415 PF4P02776 101 aa13.97□□□□□ -0.17
COL4A3BP-201ENST00000261415 ZNF80P51504 273 aaPredicted RBP13.97□□□□□ -0.17
COL4A3BP-201ENST00000261415 SOCS3O14543 225 aa13.97□□□□□ -0.17
COL4A3BP-201ENST00000261415 TMEM170BQ5T4T1 132 aa13.97□□□□□ -0.17
COL4A3BP-201ENST00000261415 RNF182Q8N6D2 247 aa13.97□□□□□ -0.17
COL4A3BP-201ENST00000261415 C16orf92Q96LL3 132 aa13.97□□□□□ -0.17
COL4A3BP-201ENST00000261415 FAM236AA0A1B0GUQ0 79 aa13.96□□□□□ -0.17
COL4A3BP-201ENST00000261415 FAM236BA0A1B0GV22 79 aa13.96□□□□□ -0.17
COL4A3BP-201ENST00000261415 A4D1N5 150 aa13.96□□□□□ -0.17
COL4A3BP-201ENST00000261415 ERCC8Q13216 396 aa13.96□□□□□ -0.17
COL4A3BP-201ENST00000261415 DYNLRB2Q8TF09 96 aa13.96□□□□□ -0.17
COL4A3BP-201ENST00000261415 SMIM2Q9BVW6 85 aa13.96□□□□□ -0.17
COL4A3BP-201ENST00000261415 STAB1Q9NY15 2570 aa13.96□□□□□ -0.18
COL4A3BP-201ENST00000261415 H3BT86 120 aa13.95□□□□□ -0.18
COL4A3BP-201ENST00000261415 DEFB121Q5J5C9 76 aa13.95□□□□□ -0.18
COL4A3BP-201ENST00000261415 POM121L12Q8N7R1 296 aa13.95□□□□□ -0.18
COL4A3BP-201ENST00000261415 SORL1Q92673 2214 aa13.95□□□□□ -0.18
COL4A3BP-201ENST00000261415 TRGV11A0A075B6L2 103 aa13.95□□□□□ -0.18
COL4A3BP-201ENST00000261415 PRB4P10163 310 aaPredicted RBP13.95□□□□□ -0.18
COL4A3BP-201ENST00000261415 C2orf82Q6UX34 121 aa13.95□□□□□ -0.18
COL4A3BP-201ENST00000261415 DCANP1Q8TF63 244 aa13.95□□□□□ -0.18
COL4A3BP-201ENST00000261415 IGKV2-40A0A087WW87 121 aaPredicted RBP13.94□□□□□ -0.18
COL4A3BP-201ENST00000261415 IGKV2D-40P01614 121 aaPredicted RBP13.94□□□□□ -0.18
COL4A3BP-201ENST00000261415 LINC00482Q8N8I6 264 aa13.94□□□□□ -0.18
COL4A3BP-201ENST00000261415 TMEM263Q8WUH6 116 aaKnown RBP13.94□□□□□ -0.18
COL4A3BP-201ENST00000261415 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.94□□□□□ -0.18
COL4A3BP-201ENST00000261415 ACYP1P07311 99 aa13.94□□□□□ -0.18
COL4A3BP-201ENST00000261415 PMVKQ15126 192 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms