RNA–Protein interactions for RNA: ENST00000259951.11

HLA-F-216, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS P4 BASIC

Gene HLA-F, Length 1,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-216ENST00000259951 GAGE1Q13065 139 aa11.8□□□□□ -0.52
HLA-F-216ENST00000259951 GAGE4Q13068 117 aa11.8□□□□□ -0.52
HLA-F-216ENST00000259951 GAGE5Q13069 117 aa11.8□□□□□ -0.52
HLA-F-216ENST00000259951 GAGE13Q4V321 117 aa11.8□□□□□ -0.52
HLA-F-216ENST00000259951 C2orf66Q6UXQ4 117 aa11.8□□□□□ -0.52
HLA-F-216ENST00000259951 IFI27L1Q96BM0 104 aa11.8□□□□□ -0.52
HLA-F-216ENST00000259951 A0A0J9YWU9 116 aa11.79□□□□□ -0.52
HLA-F-216ENST00000259951 SCGB1D1O95968 90 aa11.79□□□□□ -0.52
HLA-F-216ENST00000259951 LINC00173Q6ZV60 143 aa11.79□□□□□ -0.52
HLA-F-216ENST00000259951 PAX4O43316 350 aa11.78□□□□□ -0.52
HLA-F-216ENST00000259951 DEFA6Q01524 100 aa11.78□□□□□ -0.52
HLA-F-216ENST00000259951 C12orf74Q32Q52 190 aa11.78□□□□□ -0.52
HLA-F-216ENST00000259951 PHLDA1Q8WV24 401 aaPredicted RBP11.78□□□□□ -0.52
HLA-F-216ENST00000259951 C20orf202A1L168 122 aa11.78□□□□□ -0.52
HLA-F-216ENST00000259951 F5H768 121 aa11.78□□□□□ -0.52
HLA-F-216ENST00000259951 SYS1-DBNDD2H3BUS1 97 aa11.78□□□□□ -0.52
HLA-F-216ENST00000259951 PET117Q6UWS5 81 aa11.78□□□□□ -0.52
HLA-F-216ENST00000259951 SCGB3A1Q96QR1 104 aa11.78□□□□□ -0.52
HLA-F-216ENST00000259951 B9D2Q9BPU9 175 aa11.78□□□□□ -0.52
HLA-F-216ENST00000259951 IGHV3-38A0A0C4DH36 116 aa11.77□□□□□ -0.53
HLA-F-216ENST00000259951 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.77□□□□□ -0.53
HLA-F-216ENST00000259951 GYPEP15421 78 aa11.77□□□□□ -0.53
HLA-F-216ENST00000259951 C20orf203Q8NBC4 194 aa11.77□□□□□ -0.53
HLA-F-216ENST00000259951 LOC100131303A0A0U1RQF7 123 aa11.76□□□□□ -0.53
HLA-F-216ENST00000259951 TMEM97Q5BJF2 176 aa11.76□□□□□ -0.53
HLA-F-216ENST00000259951 ERASQ7Z444 233 aa11.76□□□□□ -0.53
HLA-F-216ENST00000259951 SPATA12Q7Z6I5 190 aa11.76□□□□□ -0.53
HLA-F-216ENST00000259951 C11orf45Q8TAV5 145 aa11.76□□□□□ -0.53
HLA-F-216ENST00000259951 DEFB104AQ8WTQ1 72 aa11.76□□□□□ -0.53
HLA-F-216ENST00000259951 LINC00694P0DN24 101 aa11.75□□□□□ -0.53
HLA-F-216ENST00000259951 HTN3P15516 51 aa11.75□□□□□ -0.53
HLA-F-216ENST00000259951 GTSF1LQ9H1H1 148 aa11.75□□□□□ -0.53
HLA-F-216ENST00000259951 Q6ZN92 141 aa11.75□□□□□ -0.53
HLA-F-216ENST00000259951 TMEM141Q96I45 108 aa11.75□□□□□ -0.53
HLA-F-216ENST00000259951 PRSS1P07477 247 aa11.74□□□□□ -0.53
HLA-F-216ENST00000259951 TIMM17AQ99595 171 aa11.74□□□□□ -0.53
HLA-F-216ENST00000259951 TRAV26-1A0A087WT03 109 aa11.73□□□□□ -0.53
HLA-F-216ENST00000259951 H0Y8G0 127 aa11.73□□□□□ -0.53
HLA-F-216ENST00000259951 RPL39P62891 51 aaKnown RBP11.73□□□□□ -0.53
HLA-F-216ENST00000259951 SH2D6Q7Z4S9 175 aa11.73□□□□□ -0.53
HLA-F-216ENST00000259951 ATP6V0E2Q8NHE4 81 aa11.73□□□□□ -0.53
HLA-F-216ENST00000259951 CHCHD7Q9BUK0 85 aa11.73□□□□□ -0.53
HLA-F-216ENST00000259951 A0A0J9YY99 117 aa11.72□□□□□ -0.53
HLA-F-216ENST00000259951 SMAGPQ0VAQ4 97 aa11.72□□□□□ -0.53
HLA-F-216ENST00000259951 VSIG2Q96IQ7 327 aa11.72□□□□□ -0.53
HLA-F-216ENST00000259951 IGIPA6NJ69 53 aa11.71□□□□□ -0.53
HLA-F-216ENST00000259951 MRPL23Q16540 153 aaKnown RBP11.71□□□□□ -0.53
HLA-F-216ENST00000259951 LINC01545Q5VT33 79 aa11.71□□□□□ -0.53
HLA-F-216ENST00000259951 LGALS9CQ6DKI2 356 aa11.71□□□□□ -0.53
HLA-F-216ENST00000259951 Q6ZTC4 211 aa11.71□□□□□ -0.53
HLA-F-216ENST00000259951 Q8N976 141 aa11.71□□□□□ -0.53
HLA-F-216ENST00000259951 PYGO1Q9Y3Y4 419 aa11.71□□□□□ -0.53
HLA-F-216ENST00000259951 TRBV25-1A0A075B6N4 114 aa11.71□□□□□ -0.54
HLA-F-216ENST00000259951 H3BNG1 76 aa11.71□□□□□ -0.54
HLA-F-216ENST00000259951 NPSP0C0P6 89 aa11.71□□□□□ -0.54
HLA-F-216ENST00000259951 NHLRC4P0CG21 123 aaPredicted RBP11.71□□□□□ -0.54
HLA-F-216ENST00000259951 PAPPA-AS1Q5QFB9 102 aa11.71□□□□□ -0.54
HLA-F-216ENST00000259951 SPANXA1Q9NS26 97 aa11.71□□□□□ -0.54
HLA-F-216ENST00000259951 ICOSQ9Y6W8 199 aa11.71□□□□□ -0.54
HLA-F-216ENST00000259951 PRKDCP78527 4128 aaKnown RBP11.71□□□□□ -0.54
HLA-F-216ENST00000259951 NANOS2P60321 138 aaKnown RBP11.7□□□□□ -0.54
HLA-F-216ENST00000259951 TMEM243Q9BU79 118 aa11.7□□□□□ -0.54
HLA-F-216ENST00000259951 TENM3Q9P273 2699 aa11.7□□□□□ -0.54
HLA-F-216ENST00000259951 TRAV12-1A0A0B4J245 112 aa11.69□□□□□ -0.54
HLA-F-216ENST00000259951 H7C423 109 aa11.69□□□□□ -0.54
HLA-F-216ENST00000259951 NTM-AS1Q6ZSK4 140 aa11.69□□□□□ -0.54
HLA-F-216ENST00000259951 TIMM21Q9BVV7 248 aa11.69□□□□□ -0.54
HLA-F-216ENST00000259951 TGP01266 2768 aa11.69□□□□□ -0.54
HLA-F-216ENST00000259951 TRBV6-8A0A0A6YYG3 113 aa11.68□□□□□ -0.54
HLA-F-216ENST00000259951 TSTD3H0UI37 97 aa11.68□□□□□ -0.54
HLA-F-216ENST00000259951 UBE2L6O14933 153 aa11.68□□□□□ -0.54
HLA-F-216ENST00000259951 PKIAP61925 76 aa11.68□□□□□ -0.54
HLA-F-216ENST00000259951 CDPF1Q6NVV7 123 aa11.68□□□□□ -0.54
HLA-F-216ENST00000259951 TEX43Q6ZNM6 134 aa11.68□□□□□ -0.54
HLA-F-216ENST00000259951 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.68□□□□□ -0.54
HLA-F-216ENST00000259951 DEFB131BA0A096LNP1 70 aa11.68□□□□□ -0.54
HLA-F-216ENST00000259951 IGKV2-29A2NJV5 120 aaPredicted RBP11.68□□□□□ -0.54
HLA-F-216ENST00000259951 BAALCQ8WXS3 180 aa11.68□□□□□ -0.54
HLA-F-216ENST00000259951 A0A087WX48 190 aa11.67□□□□□ -0.54
HLA-F-216ENST00000259951 UBE2D4Q9Y2X8 147 aa11.67□□□□□ -0.54
HLA-F-216ENST00000259951 TRAV10A0A0B4J240 114 aa11.66□□□□□ -0.54
HLA-F-216ENST00000259951 ODF1Q14990 250 aa11.66□□□□□ -0.54
HLA-F-216ENST00000259951 PMVKQ15126 192 aa11.66□□□□□ -0.54
HLA-F-216ENST00000259951 DGAT2L7PQ6IED9 249 aa11.66□□□□□ -0.54
HLA-F-216ENST00000259951 MRPL52Q86TS9 123 aaKnown RBP11.65□□□□□ -0.54
HLA-F-216ENST00000259951 VAMP8Q9BV40 100 aa11.65□□□□□ -0.54
HLA-F-216ENST00000259951 CSDC2Q9Y534 153 aaKnown RBP11.65□□□□□ -0.54
HLA-F-216ENST00000259951 IGLV4-3A0A075B6K6 122 aa11.64□□□□□ -0.55
HLA-F-216ENST00000259951 AMMECR1LQ6DCA0 310 aa11.64□□□□□ -0.55
HLA-F-216ENST00000259951 VCX2Q9H322 139 aa11.64□□□□□ -0.55
HLA-F-216ENST00000259951 A0A096LPF7 62 aa11.64□□□□□ -0.55
HLA-F-216ENST00000259951 PRSS29PA6NIE9 313 aa11.64□□□□□ -0.55
HLA-F-216ENST00000259951 FGF6P10767 208 aa11.64□□□□□ -0.55
HLA-F-216ENST00000259951 MRPS36P82909 103 aaKnown RBP11.64□□□□□ -0.55
HLA-F-216ENST00000259951 TMEM101Q96IK0 257 aa11.64□□□□□ -0.55
HLA-F-216ENST00000259951 PMCHL2Q9BQD1 86 aa11.64□□□□□ -0.55
HLA-F-216ENST00000259951 CHCHD5Q9BSY4 110 aa11.64□□□□□ -0.55
HLA-F-216ENST00000259951 CHTOPQ9Y3Y2 248 aaKnown RBP11.64□□□□□ -0.55
HLA-F-216ENST00000259951 HSBP1L1C9JCN9 74 aa11.63□□□□□ -0.55
HLA-F-216ENST00000259951 F8VRH5 84 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms