RNA–Protein interactions for RNA: ENST00000257765.9

KHDC1-201, Transcript of KH domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KHDC1, Length 1,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1-201ENST00000257765 LRP2P98164 4655 aa11.66□□□□□ -0.54
KHDC1-201ENST00000257765 C19orf71A6NCJ1 209 aa11.66□□□□□ -0.54
KHDC1-201ENST00000257765 CFAP161Q6P656 301 aa11.66□□□□□ -0.54
KHDC1-201ENST00000257765 TNXBP22105 4242 aa11.65□□□□□ -0.54
KHDC1-201ENST00000257765 XKRY2A2RUG3 117 aa11.65□□□□□ -0.54
KHDC1-201ENST00000257765 GAGE12HA6NDE8 117 aa11.65□□□□□ -0.54
KHDC1-201ENST00000257765 F2Z2F3 143 aa11.65□□□□□ -0.54
KHDC1-201ENST00000257765 COX6A2Q02221 97 aa11.65□□□□□ -0.54
KHDC1-201ENST00000257765 GNG13Q9P2W3 67 aa11.65□□□□□ -0.54
KHDC1-201ENST00000257765 KANTRA0A1W2PQU2 76 aa11.64□□□□□ -0.55
KHDC1-201ENST00000257765 BCL2L11O43521 198 aa11.64□□□□□ -0.55
KHDC1-201ENST00000257765 NDUFS6O75380 124 aaKnown RBP11.64□□□□□ -0.55
KHDC1-201ENST00000257765 RPS10P46783 165 aaKnown RBP11.64□□□□□ -0.55
KHDC1-201ENST00000257765 SMIM12Q96EX1 92 aa11.64□□□□□ -0.55
KHDC1-201ENST00000257765 IGKV3OR2-268A0A0C4DH90 116 aa11.63□□□□□ -0.55
KHDC1-201ENST00000257765 MAJINQ3KP22 176 aa11.63□□□□□ -0.55
KHDC1-201ENST00000257765 HIGD2BQ4VC39 106 aa11.63□□□□□ -0.55
KHDC1-201ENST00000257765 LYZL1Q6UWQ5 148 aa11.63□□□□□ -0.55
KHDC1-201ENST00000257765 IGKV2-24A0A0C4DH68 120 aa11.62□□□□□ -0.55
KHDC1-201ENST00000257765 IFNA1P01562 189 aa11.62□□□□□ -0.55
KHDC1-201ENST00000257765 NTF3P20783 257 aa11.62□□□□□ -0.55
KHDC1-201ENST00000257765 GNG4P50150 75 aa11.62□□□□□ -0.55
KHDC1-201ENST00000257765 EIF5AP63241 154 aaKnown RBP11.62□□□□□ -0.55
KHDC1-201ENST00000257765 CCL20P78556 96 aa11.62□□□□□ -0.55
KHDC1-201ENST00000257765 PRR3P79522 188 aaKnown RBP11.62□□□□□ -0.55
KHDC1-201ENST00000257765 GTSF1Q8WW33 167 aa11.62□□□□□ -0.55
KHDC1-201ENST00000257765 RAB19A4D1S5 217 aa11.61□□□□□ -0.55
KHDC1-201ENST00000257765 HMSDA8MTL9 139 aa11.61□□□□□ -0.55
KHDC1-201ENST00000257765 RGS21Q2M5E4 152 aa11.61□□□□□ -0.55
KHDC1-201ENST00000257765 PRSS3P2Q8NHM4 247 aa11.61□□□□□ -0.55
KHDC1-201ENST00000257765 LINC01600Q96MT4 127 aa11.61□□□□□ -0.55
KHDC1-201ENST00000257765 CHCHD10Q8WYQ3 142 aaPredicted RBP11.6□□□□□ -0.55
KHDC1-201ENST00000257765 GVQW2A0A096LPI5 108 aaPredicted RBP11.59□□□□□ -0.55
KHDC1-201ENST00000257765 CTRLP40313 264 aa11.59□□□□□ -0.55
KHDC1-201ENST00000257765 AMMECR1LQ6DCA0 310 aa11.59□□□□□ -0.55
KHDC1-201ENST00000257765 STPG4Q8N801 248 aa11.59□□□□□ -0.55
KHDC1-201ENST00000257765 BIN3Q9NQY0 253 aa11.59□□□□□ -0.55
KHDC1-201ENST00000257765 TRAV1-1A0A0B4J248 108 aa11.58□□□□□ -0.56
KHDC1-201ENST00000257765 C9orf62Q8N4C0 152 aa11.58□□□□□ -0.56
KHDC1-201ENST00000257765 TRBV20OR9-2A0A075B6H5 130 aa11.57□□□□□ -0.56
KHDC1-201ENST00000257765 TEX46H3BTG2 121 aa11.57□□□□□ -0.56
KHDC1-201ENST00000257765 MEF2BQ02080 365 aaPredicted RBP11.57□□□□□ -0.56
KHDC1-201ENST00000257765 TWIST1Q15672 202 aa11.57□□□□□ -0.56
KHDC1-201ENST00000257765 RNASEKQ6P5S7 137 aaKnown RBP11.57□□□□□ -0.56
KHDC1-201ENST00000257765 Q6ZNX1 250 aa11.57□□□□□ -0.56
KHDC1-201ENST00000257765 GATD1Q8NB37 220 aa11.57□□□□□ -0.56
KHDC1-201ENST00000257765 LYPD6BQ8NI32 183 aa11.57□□□□□ -0.56
KHDC1-201ENST00000257765 A0A096LNI7 61 aa11.56□□□□□ -0.56
KHDC1-201ENST00000257765 TRAV26-2A0A0B4J265 109 aa11.56□□□□□ -0.56
KHDC1-201ENST00000257765 PDE6DO43924 150 aa11.56□□□□□ -0.56
KHDC1-201ENST00000257765 NCR2O95944 276 aa11.56□□□□□ -0.56
KHDC1-201ENST00000257765 CNFNQ9BYD5 112 aa11.56□□□□□ -0.56
KHDC1-201ENST00000257765 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.55□□□□□ -0.56
KHDC1-201ENST00000257765 IGKV2-29A2NJV5 120 aaPredicted RBP11.55□□□□□ -0.56
KHDC1-201ENST00000257765 H7C423 109 aa11.55□□□□□ -0.56
KHDC1-201ENST00000257765 APCSP02743 223 aa11.55□□□□□ -0.56
KHDC1-201ENST00000257765 NUDT10Q8NFP7 164 aa11.55□□□□□ -0.56
KHDC1-201ENST00000257765 NUDT11Q96G61 164 aa11.55□□□□□ -0.56
KHDC1-201ENST00000257765 MED9Q9NWA0 146 aa11.55□□□□□ -0.56
KHDC1-201ENST00000257765 RNF213Q63HN8 5207 aa11.54□□□□□ -0.56
KHDC1-201ENST00000257765 A0A0J9YXV3 536 aa11.54□□□□□ -0.56
KHDC1-201ENST00000257765 FGF6P10767 208 aa11.54□□□□□ -0.56
KHDC1-201ENST00000257765 FOXI1Q12951 378 aa11.54□□□□□ -0.56
KHDC1-201ENST00000257765 ODF1Q14990 250 aa11.54□□□□□ -0.56
KHDC1-201ENST00000257765 RPL39LQ96EH5 51 aaKnown RBP11.54□□□□□ -0.56
KHDC1-201ENST00000257765 PKIGQ9Y2B9 76 aa11.54□□□□□ -0.56
KHDC1-201ENST00000257765 RPP21Q9H633 154 aaKnown RBP11.53□□□□□ -0.56
KHDC1-201ENST00000257765 LINC00474Q9P2X8 69 aa11.53□□□□□ -0.56
KHDC1-201ENST00000257765 REG3GQ6UW15 175 aa11.52□□□□□ -0.57
KHDC1-201ENST00000257765 SPINK6Q6UWN8 80 aa11.52□□□□□ -0.57
KHDC1-201ENST00000257765 OR5A1Q8NGJ0 315 aa11.52□□□□□ -0.57
KHDC1-201ENST00000257765 BCL2P10415 239 aa11.51□□□□□ -0.57
KHDC1-201ENST00000257765 ZNF25P17030 456 aaPredicted RBP11.51□□□□□ -0.57
KHDC1-201ENST00000257765 XCL1P47992 114 aa11.51□□□□□ -0.57
KHDC1-201ENST00000257765 EIF5AL1Q6IS14 154 aaKnown RBP11.51□□□□□ -0.57
KHDC1-201ENST00000257765 SMIM15Q7Z3B0 74 aa11.51□□□□□ -0.57
KHDC1-201ENST00000257765 IGHV1-58A0A0C4DH39 117 aa11.5□□□□□ -0.57
KHDC1-201ENST00000257765 SDHAF1A6NFY7 115 aa11.5□□□□□ -0.57
KHDC1-201ENST00000257765 TEX261Q6UWH6 196 aa11.5□□□□□ -0.57
KHDC1-201ENST00000257765 BTF3L4Q96K17 158 aa11.5□□□□□ -0.57
KHDC1-201ENST00000257765 CARD19Q96LW7 228 aa11.5□□□□□ -0.57
KHDC1-201ENST00000257765 RNASE7Q9H1E1 156 aaKnown RBP11.5□□□□□ -0.57
KHDC1-201ENST00000257765 KRTAP10-8P60410 259 aa11.49□□□□□ -0.57
KHDC1-201ENST00000257765 TMEM101Q96IK0 257 aa11.49□□□□□ -0.57
KHDC1-201ENST00000257765 LINC00959A0A1B0GUT2 108 aa11.48□□□□□ -0.57
KHDC1-201ENST00000257765 CCL25O15444 150 aa11.48□□□□□ -0.57
KHDC1-201ENST00000257765 Q6ZRP5 223 aa11.48□□□□□ -0.57
KHDC1-201ENST00000257765 LINC00526Q96FQ7 95 aa11.48□□□□□ -0.57
KHDC1-201ENST00000257765 I3L3M4 83 aa11.47□□□□□ -0.57
KHDC1-201ENST00000257765 K7EN84 100 aa11.47□□□□□ -0.57
KHDC1-201ENST00000257765 PMCHP20382 165 aa11.47□□□□□ -0.57
KHDC1-201ENST00000257765 FOXA3P55318 350 aaPredicted RBP11.47□□□□□ -0.57
KHDC1-201ENST00000257765 TRBV6-5A0A0K0K1A5 114 aa11.45□□□□□ -0.58
KHDC1-201ENST00000257765 FAM231BA6NCW3 169 aa11.45□□□□□ -0.58
KHDC1-201ENST00000257765 ZNF561-AS1K7EIQ3 104 aa11.45□□□□□ -0.58
KHDC1-201ENST00000257765 TAGLN2P37802 199 aaKnown RBP11.45□□□□□ -0.58
KHDC1-201ENST00000257765 SYCNQ0VAF6 134 aa11.45□□□□□ -0.58
KHDC1-201ENST00000257765 SRSF9Q13242 221 aaKnown RBP eCLIP11.45□□□□□ -0.58
KHDC1-201ENST00000257765 OCC1Q8TAD7 63 aa11.45□□□□□ -0.58
KHDC1-201ENST00000257765 ESDP10768 282 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms