RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 H3BUT2 72 aa18.17■□□□□ 0.5
TMEM55B-201ENST00000250489 TMEM170BQ5T4T1 132 aa18.17■□□□□ 0.5
TMEM55B-201ENST00000250489 GIG44P09565 113 aaPredicted RBP18.16■□□□□ 0.5
TMEM55B-201ENST00000250489 KRTAP10-3P60369 221 aa18.16■□□□□ 0.5
TMEM55B-201ENST00000250489 HIST1H4GQ99525 98 aa18.16■□□□□ 0.5
TMEM55B-201ENST00000250489 TMEM263Q8WUH6 116 aaKnown RBP18.15■□□□□ 0.5
TMEM55B-201ENST00000250489 NAA38Q9BRA0 125 aaKnown RBP18.15■□□□□ 0.5
TMEM55B-201ENST00000250489 VCX2Q9H322 139 aa18.15■□□□□ 0.5
TMEM55B-201ENST00000250489 SETD2Q9BYW2 2564 aaPredicted RBP18.15■□□□□ 0.5
TMEM55B-201ENST00000250489 TRGV1A0A0A0MS02 117 aa18.14■□□□□ 0.49
TMEM55B-201ENST00000250489 CHCHD7Q9BUK0 85 aa18.14■□□□□ 0.49
TMEM55B-201ENST00000250489 NDUFA11Q86Y39 141 aa18.13■□□□□ 0.49
TMEM55B-201ENST00000250489 FAM104AQ969W3 186 aa18.13■□□□□ 0.49
TMEM55B-201ENST00000250489 K7ERJ3 54 aa18.13■□□□□ 0.49
TMEM55B-201ENST00000250489 PHLDA1Q8WV24 401 aaPredicted RBP18.13■□□□□ 0.49
TMEM55B-201ENST00000250489 PLEKHB2Q96CS7 222 aa18.13■□□□□ 0.49
TMEM55B-201ENST00000250489 NHP2Q9NX24 153 aaKnown RBP18.13■□□□□ 0.49
TMEM55B-201ENST00000250489 HIVEP2P31629 2446 aa18.13■□□□□ 0.49
TMEM55B-201ENST00000250489 RPL35AP18077 110 aaKnown RBP18.11■□□□□ 0.49
TMEM55B-201ENST00000250489 TSPEAR-AS2P59090 65 aa18.11■□□□□ 0.49
TMEM55B-201ENST00000250489 AMELXQ99217 191 aa18.11■□□□□ 0.49
TMEM55B-201ENST00000250489 Q6ZTI0 123 aa18.1■□□□□ 0.49
TMEM55B-201ENST00000250489 A0A0J9YXV3 536 aa18.1■□□□□ 0.49
TMEM55B-201ENST00000250489 CRYBA4P53673 196 aa18.1■□□□□ 0.49
TMEM55B-201ENST00000250489 CEMP1Q6PRD7 247 aaPredicted RBP18.1■□□□□ 0.49
TMEM55B-201ENST00000250489 SCGB1D4Q6XE38 83 aa18.1■□□□□ 0.49
TMEM55B-201ENST00000250489 ZNF479Q96JC4 524 aa18.1■□□□□ 0.49
TMEM55B-201ENST00000250489 IGHV3-38A0A0C4DH36 116 aa18.09■□□□□ 0.49
TMEM55B-201ENST00000250489 A0A1W2PPM0 123 aa18.09■□□□□ 0.49
TMEM55B-201ENST00000250489 TMEM223A0PJW6 202 aa18.09■□□□□ 0.49
TMEM55B-201ENST00000250489 GAGE10A6NGK3 116 aa18.09■□□□□ 0.49
TMEM55B-201ENST00000250489 ZNF22P17026 224 aaPredicted RBP18.09■□□□□ 0.49
TMEM55B-201ENST00000250489 COTL1Q14019 142 aa18.08■□□□□ 0.49
TMEM55B-201ENST00000250489 SPANXA1Q9NS26 97 aa18.08■□□□□ 0.48
TMEM55B-201ENST00000250489 UBE2D4Q9Y2X8 147 aa18.08■□□□□ 0.48
TMEM55B-201ENST00000250489 SETXQ7Z333 2677 aaKnown RBP18.07■□□□□ 0.48
TMEM55B-201ENST00000250489 IGKV2D-29A0A075B6S2 120 aaPredicted RBP18.06■□□□□ 0.48
TMEM55B-201ENST00000250489 IGKV2-29A2NJV5 120 aaPredicted RBP18.06■□□□□ 0.48
TMEM55B-201ENST00000250489 K7EP34 96 aa18.06■□□□□ 0.48
TMEM55B-201ENST00000250489 DAZ2Q13117 558 aaKnown RBP18.06■□□□□ 0.48
TMEM55B-201ENST00000250489 GTF2H5Q6ZYL4 71 aa18.06■□□□□ 0.48
TMEM55B-201ENST00000250489 C1QTNF4Q9BXJ3 329 aa18.06■□□□□ 0.48
TMEM55B-201ENST00000250489 HECTD1Q9ULT8 2610 aa18.06■□□□□ 0.48
TMEM55B-201ENST00000250489 TRAV4A0A0B4J268 109 aa18.06■□□□□ 0.48
TMEM55B-201ENST00000250489 J3QQQ9 107 aa18.06■□□□□ 0.48
TMEM55B-201ENST00000250489 PF4P02776 101 aa18.06■□□□□ 0.48
TMEM55B-201ENST00000250489 C12orf74Q32Q52 190 aa18.06■□□□□ 0.48
TMEM55B-201ENST00000250489 SAMD5Q5TGI4 173 aa18.06■□□□□ 0.48
TMEM55B-201ENST00000250489 LINC00482Q8N8I6 264 aa18.06■□□□□ 0.48
TMEM55B-201ENST00000250489 CSNK1G2-AS1Q8NCQ2 148 aa18.06■□□□□ 0.48
TMEM55B-201ENST00000250489 C16orf74Q96GX8 76 aa18.06■□□□□ 0.48
TMEM55B-201ENST00000250489 NOP10Q9NPE3 64 aaKnown RBP18.06■□□□□ 0.48
TMEM55B-201ENST00000250489 PLAC8L1A1L4L8 177 aa18.05■□□□□ 0.48
TMEM55B-201ENST00000250489 NIPBLQ6KC79 2804 aaeCLIP18.04■□□□□ 0.48
TMEM55B-201ENST00000250489 A0A0J9YY99 117 aa18.04■□□□□ 0.48
TMEM55B-201ENST00000250489 INAFM1C9JVW0 142 aa18.04■□□□□ 0.48
TMEM55B-201ENST00000250489 LEPROTO15243 131 aa18.04■□□□□ 0.48
TMEM55B-201ENST00000250489 MRPS36P82909 103 aaKnown RBP18.03■□□□□ 0.48
TMEM55B-201ENST00000250489 A0A1B0GWB2 263 aa18.02■□□□□ 0.48
TMEM55B-201ENST00000250489 K7EQD1 137 aa18.02■□□□□ 0.48
TMEM55B-201ENST00000250489 LGALS3P17931 250 aaKnown RBP18.02■□□□□ 0.48
TMEM55B-201ENST00000250489 RNASE13Q5GAN3 156 aaKnown RBP18.02■□□□□ 0.48
TMEM55B-201ENST00000250489 TRBV10-1A0A0K0K1A3 114 aa18.02■□□□□ 0.47
TMEM55B-201ENST00000250489 FABP2P12104 132 aa18.02■□□□□ 0.47
TMEM55B-201ENST00000250489 OR5A1Q8NGJ0 315 aa18.02■□□□□ 0.47
TMEM55B-201ENST00000250489 SPCS1Q9Y6A9 102 aa18.01■□□□□ 0.47
TMEM55B-201ENST00000250489 SRSF9Q13242 221 aaKnown RBP eCLIP18■□□□□ 0.47
TMEM55B-201ENST00000250489 Q6ZUT4 128 aa18■□□□□ 0.47
TMEM55B-201ENST00000250489 IGLL5B9A064 214 aa17.99■□□□□ 0.47
TMEM55B-201ENST00000250489 RPL36AP83881 106 aaKnown RBP17.99■□□□□ 0.47
TMEM55B-201ENST00000250489 RPL36ALQ969Q0 106 aaKnown RBP17.99■□□□□ 0.47
TMEM55B-201ENST00000250489 SPANXB1Q9NS25 103 aaPredicted RBP17.99■□□□□ 0.47
TMEM55B-201ENST00000250489 RRN3P1Q2M238 152 aa17.99■□□□□ 0.47
TMEM55B-201ENST00000250489 SLC25A29Q8N8R3 303 aa17.99■□□□□ 0.47
TMEM55B-201ENST00000250489 OTOGQ6ZRI0 2925 aa17.98■□□□□ 0.47
TMEM55B-201ENST00000250489 IGHV3-64A0A075B6Q5 118 aa17.98■□□□□ 0.47
TMEM55B-201ENST00000250489 GAGE12BA1L429 117 aa17.98■□□□□ 0.47
TMEM55B-201ENST00000250489 OVOL2Q9BRP0 275 aa17.98■□□□□ 0.47
TMEM55B-201ENST00000250489 JMJD1CQ15652 2540 aa17.98■□□□□ 0.47
TMEM55B-201ENST00000250489 TIMM21Q9BVV7 248 aa17.97■□□□□ 0.47
TMEM55B-201ENST00000250489 TINCRA0A1B0GVN0 87 aa17.96■□□□□ 0.47
TMEM55B-201ENST00000250489 GAGE7O76087 117 aa17.96■□□□□ 0.47
TMEM55B-201ENST00000250489 GAGE12FP0CL80 117 aa17.96■□□□□ 0.47
TMEM55B-201ENST00000250489 GAGE12GP0CL81 117 aa17.96■□□□□ 0.47
TMEM55B-201ENST00000250489 GAGE12IP0CL82 117 aa17.96■□□□□ 0.47
TMEM55B-201ENST00000250489 TMEM238LA0A1B0GVL6 79 aa17.95■□□□□ 0.46
TMEM55B-201ENST00000250489 A6NJY4 79 aa17.95■□□□□ 0.46
TMEM55B-201ENST00000250489 UBE2D3P61077 147 aa17.95■□□□□ 0.46
TMEM55B-201ENST00000250489 UBE2D2P62837 147 aa17.95■□□□□ 0.46
TMEM55B-201ENST00000250489 DAZ4Q86SG3 579 aaKnown RBP17.95■□□□□ 0.46
TMEM55B-201ENST00000250489 DAZ3Q9NR90 486 aaKnown RBP17.95■□□□□ 0.46
TMEM55B-201ENST00000250489 TRGV2A0A075B6R0 118 aa17.94■□□□□ 0.46
TMEM55B-201ENST00000250489 GAGE12JA6NER3 117 aa17.93■□□□□ 0.46
TMEM55B-201ENST00000250489 GAGE4Q13068 117 aa17.93■□□□□ 0.46
TMEM55B-201ENST00000250489 GAGE5Q13069 117 aa17.93■□□□□ 0.46
TMEM55B-201ENST00000250489 GAGE13Q4V321 117 aa17.93■□□□□ 0.46
TMEM55B-201ENST00000250489 IGHV3-30P01768 117 aa17.93■□□□□ 0.46
TMEM55B-201ENST00000250489 IGHV3-30-5P0DP03 117 aa17.93■□□□□ 0.46
TMEM55B-201ENST00000250489 UBE2D1P51668 147 aa17.93■□□□□ 0.46
TMEM55B-201ENST00000250489 IGHV3-30-3P0DP02 117 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms