RNA–Protein interactions for RNA: ENST00000245414.8

IRF1-201, Transcript of interferon regulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-201ENST00000245414 SDHAF1A6NFY7 115 aa7.34□□□□□ -1.24
IRF1-201ENST00000245414 VCYO14598 125 aa7.34□□□□□ -1.24
IRF1-201ENST00000245414 LHBP01229 141 aa7.34□□□□□ -1.24
IRF1-201ENST00000245414 RBMY1DP0C7P1 496 aaKnown RBP7.34□□□□□ -1.24
IRF1-201ENST00000245414 RBMY1A1P0DJD3 496 aaKnown RBP7.34□□□□□ -1.24
IRF1-201ENST00000245414 RBMY1CP0DJD4 496 aa7.34□□□□□ -1.24
IRF1-201ENST00000245414 IGHV3-30-3P0DP02 117 aa7.34□□□□□ -1.24
IRF1-201ENST00000245414 RBMY1FQ15415 496 aaKnown RBP7.34□□□□□ -1.24
IRF1-201ENST00000245414 ADAMTSL4-AS1Q5T5F5 129 aa7.34□□□□□ -1.24
IRF1-201ENST00000245414 FAM74A4Q5TZK3 123 aa7.34□□□□□ -1.24
IRF1-201ENST00000245414 COX7A1P24310 79 aa7.33□□□□□ -1.24
IRF1-201ENST00000245414 MRGPRG-AS1Q2M3A8 158 aa7.33□□□□□ -1.24
IRF1-201ENST00000245414 TMEM61Q8N0U2 210 aa7.33□□□□□ -1.24
IRF1-201ENST00000245414 TIMM17AQ99595 171 aa7.33□□□□□ -1.24
IRF1-201ENST00000245414 NDUFB3O43676 98 aa7.33□□□□□ -1.24
IRF1-201ENST00000245414 GHRHP01286 108 aa7.33□□□□□ -1.24
IRF1-201ENST00000245414 SMAD5-AS1Q9Y6J3 95 aa7.33□□□□□ -1.24
IRF1-201ENST00000245414 SORL1Q92673 2214 aa7.32□□□□□ -1.24
IRF1-201ENST00000245414 TRAV12-2A0A075B6T6 113 aa7.32□□□□□ -1.24
IRF1-201ENST00000245414 NDUFC2O95298 119 aa7.32□□□□□ -1.24
IRF1-201ENST00000245414 UPK3BQ9BT76 320 aa7.32□□□□□ -1.24
IRF1-201ENST00000245414 PRORYQ9H606 182 aa7.32□□□□□ -1.24
IRF1-201ENST00000245414 A0A087WWL8 130 aa7.32□□□□□ -1.24
IRF1-201ENST00000245414 MIAQ16674 131 aa7.32□□□□□ -1.24
IRF1-201ENST00000245414 Q9HAA7 133 aa7.32□□□□□ -1.24
IRF1-201ENST00000245414 TRAV23DV6A0A075B6W5 121 aa7.31□□□□□ -1.24
IRF1-201ENST00000245414 FAM223BA6NKX1 122 aa7.31□□□□□ -1.24
IRF1-201ENST00000245414 HOXD3P31249 432 aaPredicted RBP7.31□□□□□ -1.24
IRF1-201ENST00000245414 PSMG3-AS1Q96PY0 264 aa7.31□□□□□ -1.24
IRF1-201ENST00000245414 PRRC2AP48634 2157 aaKnown RBP7.31□□□□□ -1.24
IRF1-201ENST00000245414 LINC00574Q9H8X3 128 aa7.31□□□□□ -1.24
IRF1-201ENST00000245414 KNCNA6PVL3 124 aa7.31□□□□□ -1.24
IRF1-201ENST00000245414 COX7A2LO14548 114 aa7.31□□□□□ -1.24
IRF1-201ENST00000245414 C9orf139Q6ZV77 190 aa7.31□□□□□ -1.24
IRF1-201ENST00000245414 LINC01561Q8N1V8 128 aa7.31□□□□□ -1.24
IRF1-201ENST00000245414 CCL17Q92583 94 aa7.31□□□□□ -1.24
IRF1-201ENST00000245414 IGHG2P01859 326 aa7.3□□□□□ -1.24
IRF1-201ENST00000245414 C14orf132Q9NPU4 83 aa7.3□□□□□ -1.24
IRF1-201ENST00000245414 A8MZ25 164 aa7.3□□□□□ -1.24
IRF1-201ENST00000245414 K7ENP7 123 aa7.3□□□□□ -1.24
IRF1-201ENST00000245414 C9orf106Q8NAJ2 232 aa7.3□□□□□ -1.24
IRF1-201ENST00000245414 ZNF625Q96I27 306 aaPredicted RBP7.3□□□□□ -1.24
IRF1-201ENST00000245414 SERP1Q9Y6X1 66 aa7.3□□□□□ -1.24
IRF1-201ENST00000245414 IGHV4-4A0A075B6R2 117 aa7.3□□□□□ -1.24
IRF1-201ENST00000245414 BUB1B-PAK6H3BSN5 160 aa7.3□□□□□ -1.24
IRF1-201ENST00000245414 RBM3P98179 157 aaKnown RBP7.3□□□□□ -1.24
IRF1-201ENST00000245414 PRIMA1Q86XR5 153 aa7.29□□□□□ -1.24
IRF1-201ENST00000245414 IGHV1-3A0A0C4DH29 117 aa7.29□□□□□ -1.24
IRF1-201ENST00000245414 CCL21O00585 134 aa7.29□□□□□ -1.24
IRF1-201ENST00000245414 IGHV1-46P01743 117 aa7.29□□□□□ -1.24
IRF1-201ENST00000245414 RNASE13Q5GAN3 156 aaKnown RBP7.29□□□□□ -1.24
IRF1-201ENST00000245414 RNASE4P34096 147 aaKnown RBP7.29□□□□□ -1.24
IRF1-201ENST00000245414 GNRH2O43555 120 aa7.28□□□□□ -1.24
IRF1-201ENST00000245414 IGF1P05019 195 aa7.28□□□□□ -1.24
IRF1-201ENST00000245414 GPHB5Q86YW7 130 aa7.28□□□□□ -1.24
IRF1-201ENST00000245414 SLC25A15Q9Y619 301 aa7.28□□□□□ -1.24
IRF1-201ENST00000245414 TRAV21A0A0B4J279 112 aa7.28□□□□□ -1.24
IRF1-201ENST00000245414 CD28P10747 220 aa7.28□□□□□ -1.24
IRF1-201ENST00000245414 SMIM26A0A096LP01 95 aa7.28□□□□□ -1.24
IRF1-201ENST00000245414 A0A0J9YX75 114 aa7.28□□□□□ -1.24
IRF1-201ENST00000245414 RPL11P62913 178 aaKnown RBP7.28□□□□□ -1.24
IRF1-201ENST00000245414 WFDC9Q8NEX5 89 aa7.28□□□□□ -1.24
IRF1-201ENST00000245414 IL17DQ8TAD2 202 aa7.28□□□□□ -1.24
IRF1-201ENST00000245414 ATRQ13535 2644 aa7.27□□□□□ -1.25
IRF1-201ENST00000245414 RNF223E7ERA6 249 aa7.27□□□□□ -1.25
IRF1-201ENST00000245414 IGHV1-8P0DP01 117 aa7.27□□□□□ -1.25
IRF1-201ENST00000245414 HILS1P60008 231 aa7.27□□□□□ -1.25
IRF1-201ENST00000245414 SUMO4Q6EEV6 95 aa7.27□□□□□ -1.25
IRF1-201ENST00000245414 TEP1Q99973 2627 aaKnown RBP7.27□□□□□ -1.25
IRF1-201ENST00000245414 NDUFC2-KCTD14E9PQ53 114 aa7.27□□□□□ -1.25
IRF1-201ENST00000245414 Q6JHZ5 121 aa7.27□□□□□ -1.25
IRF1-201ENST00000245414 FANCD2OSQ96PS1 177 aa7.27□□□□□ -1.25
IRF1-201ENST00000245414 LINC00846Q9NV44 126 aa7.27□□□□□ -1.25
IRF1-201ENST00000245414 IGHV3OR16-10A0A075B7F0 116 aa7.26□□□□□ -1.25
IRF1-201ENST00000245414 LY6LH3BQJ8 138 aa7.26□□□□□ -1.25
IRF1-201ENST00000245414 PRR9Q5T870 116 aa7.26□□□□□ -1.25
IRF1-201ENST00000245414 LYPD2Q6UXB3 125 aa7.26□□□□□ -1.25
IRF1-201ENST00000245414 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.26□□□□□ -1.25
IRF1-201ENST00000245414 LITAFQ99732 161 aa7.26□□□□□ -1.25
IRF1-201ENST00000245414 CDSNQ15517 529 aa7.26□□□□□ -1.25
IRF1-201ENST00000245414 IGKV3-7A0A075B6H7 116 aa7.25□□□□□ -1.25
IRF1-201ENST00000245414 XCL1P47992 114 aa7.25□□□□□ -1.25
IRF1-201ENST00000245414 PRSS33Q8NF86 280 aa7.25□□□□□ -1.25
IRF1-201ENST00000245414 XCL2Q9UBD3 114 aa7.25□□□□□ -1.25
IRF1-201ENST00000245414 DCHS2Q6V1P9 2916 aa7.25□□□□□ -1.25
IRF1-201ENST00000245414 RAI1Q7Z5J4 1906 aaPredicted RBP7.25□□□□□ -1.25
IRF1-201ENST00000245414 POLR2KP53803 58 aaKnown RBP7.25□□□□□ -1.25
IRF1-201ENST00000245414 MPLKIPQ8TAP9 179 aa7.25□□□□□ -1.25
IRF1-201ENST00000245414 IGHV1-58A0A0C4DH39 117 aa7.24□□□□□ -1.25
IRF1-201ENST00000245414 IGLV1-44P01699 117 aa7.24□□□□□ -1.25
IRF1-201ENST00000245414 IGHV1-69P01742 117 aa7.24□□□□□ -1.25
IRF1-201ENST00000245414 LY6G5BQ8NDX9 201 aa7.24□□□□□ -1.25
IRF1-201ENST00000245414 CFAP46Q8IYW2 2715 aa7.24□□□□□ -1.25
IRF1-201ENST00000245414 TRBV12-3P01733 135 aa7.24□□□□□ -1.25
IRF1-201ENST00000245414 CTSGP08311 255 aa7.24□□□□□ -1.25
IRF1-201ENST00000245414 SIRPDQ9H106 197 aa7.24□□□□□ -1.25
IRF1-201ENST00000245414 A0A1W2PNU3 283 aaPredicted RBP7.24□□□□□ -1.25
IRF1-201ENST00000245414 TMEM178BH3BS89 294 aa7.24□□□□□ -1.25
IRF1-201ENST00000245414 DEFB1P60022 68 aa7.24□□□□□ -1.25
IRF1-201ENST00000245414 S100A7L2Q5SY68 101 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms