RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 PHLDA1Q8WV24 401 aaPredicted RBP5.76□□□□□ -1.49
HMGXB4-201ENST00000216106 C19orf73Q9NVV2 129 aa5.76□□□□□ -1.49
HMGXB4-201ENST00000216106 IGLV4-3A0A075B6K6 122 aa5.76□□□□□ -1.49
HMGXB4-201ENST00000216106 H3BRM9 83 aa5.76□□□□□ -1.49
HMGXB4-201ENST00000216106 RS1O15537 224 aa5.76□□□□□ -1.49
HMGXB4-201ENST00000216106 IGHV3-53P01767 116 aa5.76□□□□□ -1.49
HMGXB4-201ENST00000216106 PAPPA-AS1Q5QFB9 102 aa5.76□□□□□ -1.49
HMGXB4-201ENST00000216106 CEMP1Q6PRD7 247 aaPredicted RBP5.76□□□□□ -1.49
HMGXB4-201ENST00000216106 CEND1Q8N111 149 aa5.76□□□□□ -1.49
HMGXB4-201ENST00000216106 IL17DQ8TAD2 202 aa5.76□□□□□ -1.49
HMGXB4-201ENST00000216106 ZNF815PA8K554 130 aa5.75□□□□□ -1.49
HMGXB4-201ENST00000216106 PF4P02776 101 aa5.75□□□□□ -1.49
HMGXB4-201ENST00000216106 HIVEP1P15822 2718 aa5.75□□□□□ -1.49
HMGXB4-201ENST00000216106 TENM1Q9UKZ4 2725 aa5.75□□□□□ -1.49
HMGXB4-201ENST00000216106 H3BUT2 72 aa5.75□□□□□ -1.49
HMGXB4-201ENST00000216106 K7ERJ3 54 aa5.75□□□□□ -1.49
HMGXB4-201ENST00000216106 Q6ZTI0 123 aa5.75□□□□□ -1.49
HMGXB4-201ENST00000216106 TMEM263Q8WUH6 116 aaKnown RBP5.75□□□□□ -1.49
HMGXB4-201ENST00000216106 HIST1H4GQ99525 98 aa5.75□□□□□ -1.49
HMGXB4-201ENST00000216106 RNASE13Q5GAN3 156 aaKnown RBP5.75□□□□□ -1.49
HMGXB4-201ENST00000216106 OR4C5Q8NGB2 326 aa5.75□□□□□ -1.49
HMGXB4-201ENST00000216106 ZNF479Q96JC4 524 aa5.75□□□□□ -1.49
HMGXB4-201ENST00000216106 NHP2Q9NX24 153 aaKnown RBP5.75□□□□□ -1.49
HMGXB4-201ENST00000216106 C9orf118A6NHY6 69 aa5.74□□□□□ -1.49
HMGXB4-201ENST00000216106 HERVK_113P61574 105 aa5.74□□□□□ -1.49
HMGXB4-201ENST00000216106 NDUFA11Q86Y39 141 aa5.74□□□□□ -1.49
HMGXB4-201ENST00000216106 VCX2Q9H322 139 aa5.74□□□□□ -1.49
HMGXB4-201ENST00000216106 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.74□□□□□ -1.49
HMGXB4-201ENST00000216106 IGKV2-29A2NJV5 120 aaPredicted RBP5.74□□□□□ -1.49
HMGXB4-201ENST00000216106 CMC4P56277 68 aaPredicted RBP5.74□□□□□ -1.49
HMGXB4-201ENST00000216106 SCGB1D4Q6XE38 83 aa5.74□□□□□ -1.49
HMGXB4-201ENST00000216106 PLEKHB2Q96CS7 222 aa5.74□□□□□ -1.49
HMGXB4-201ENST00000216106 TM2D2Q9BX73 214 aa5.74□□□□□ -1.49
HMGXB4-201ENST00000216106 NOP10Q9NPE3 64 aaKnown RBP5.74□□□□□ -1.49
HMGXB4-201ENST00000216106 TSPEAR-AS2P59090 65 aa5.74□□□□□ -1.49
HMGXB4-201ENST00000216106 CHCHD7Q9BUK0 85 aa5.74□□□□□ -1.49
HMGXB4-201ENST00000216106 SMIM13P0DJ93 91 aa5.73□□□□□ -1.49
HMGXB4-201ENST00000216106 FAM104AQ969W3 186 aa5.73□□□□□ -1.49
HMGXB4-201ENST00000216106 FAM110AQ9BQ89 295 aa5.73□□□□□ -1.49
HMGXB4-201ENST00000216106 A0A0J9YXV3 536 aa5.73□□□□□ -1.49
HMGXB4-201ENST00000216106 NFE4Q86UQ8 179 aa5.73□□□□□ -1.49
HMGXB4-201ENST00000216106 TRBV7-3A0A075B6L6 115 aa5.73□□□□□ -1.49
HMGXB4-201ENST00000216106 IGHV3-64A0A075B6Q5 118 aa5.73□□□□□ -1.49
HMGXB4-201ENST00000216106 LINC00482Q8N8I6 264 aa5.73□□□□□ -1.49
HMGXB4-201ENST00000216106 DNAJC30Q96LL9 226 aa5.73□□□□□ -1.49
HMGXB4-201ENST00000216106 COTL1Q14019 142 aa5.72□□□□□ -1.49
HMGXB4-201ENST00000216106 PYGO1Q9Y3Y4 419 aa5.72□□□□□ -1.49
HMGXB4-201ENST00000216106 ZNF22P17026 224 aaPredicted RBP5.72□□□□□ -1.49
HMGXB4-201ENST00000216106 TAL2Q16559 108 aa5.72□□□□□ -1.49
HMGXB4-201ENST00000216106 UBE2D4Q9Y2X8 147 aa5.72□□□□□ -1.49
HMGXB4-201ENST00000216106 PLAC8L1A1L4L8 177 aa5.72□□□□□ -1.49
HMGXB4-201ENST00000216106 CSNK1G2-AS1Q8NCQ2 148 aa5.72□□□□□ -1.49
HMGXB4-201ENST00000216106 SPATA3Q8NHX4 192 aa5.72□□□□□ -1.49
HMGXB4-201ENST00000216106 C16orf74Q96GX8 76 aa5.71□□□□□ -1.49
HMGXB4-201ENST00000216106 AMELXQ99217 191 aa5.71□□□□□ -1.49
HMGXB4-201ENST00000216106 C1QTNF4Q9BXJ3 329 aa5.71□□□□□ -1.49
HMGXB4-201ENST00000216106 TRAV4A0A0B4J268 109 aa5.71□□□□□ -1.5
HMGXB4-201ENST00000216106 TMEM223A0PJW6 202 aa5.71□□□□□ -1.5
HMGXB4-201ENST00000216106 GAGE12BA1L429 117 aa5.71□□□□□ -1.5
HMGXB4-201ENST00000216106 GAGE10A6NGK3 116 aa5.71□□□□□ -1.5
HMGXB4-201ENST00000216106 J3QQQ9 107 aa5.71□□□□□ -1.5
HMGXB4-201ENST00000216106 K7EQD1 137 aa5.71□□□□□ -1.5
HMGXB4-201ENST00000216106 GAGE7O76087 117 aa5.71□□□□□ -1.5
HMGXB4-201ENST00000216106 GAGE12FP0CL80 117 aa5.71□□□□□ -1.5
HMGXB4-201ENST00000216106 GAGE12GP0CL81 117 aa5.71□□□□□ -1.5
HMGXB4-201ENST00000216106 GAGE12IP0CL82 117 aa5.71□□□□□ -1.5
HMGXB4-201ENST00000216106 Q6ZUT4 128 aa5.71□□□□□ -1.5
HMGXB4-201ENST00000216106 RRN3P1Q2M238 152 aa5.71□□□□□ -1.5
HMGXB4-201ENST00000216106 SLC25A29Q8N8R3 303 aa5.71□□□□□ -1.5
HMGXB4-201ENST00000216106 TRRAPQ9Y4A5 3859 aa5.71□□□□□ -1.5
HMGXB4-201ENST00000216106 ATRQ13535 2644 aa5.71□□□□□ -1.5
HMGXB4-201ENST00000216106 A0A1W2PPM0 123 aa5.71□□□□□ -1.5
HMGXB4-201ENST00000216106 DAZ2Q13117 558 aaKnown RBP5.71□□□□□ -1.5
HMGXB4-201ENST00000216106 NBEAL2Q6ZNJ1 2754 aa5.7□□□□□ -1.5
HMGXB4-201ENST00000216106 TRGV2A0A075B6R0 118 aa5.7□□□□□ -1.5
HMGXB4-201ENST00000216106 LGALS3P17931 250 aaKnown RBP5.7□□□□□ -1.5
HMGXB4-201ENST00000216106 SRSF9Q13242 221 aaKnown RBP eCLIP5.7□□□□□ -1.5
HMGXB4-201ENST00000216106 SAMD5Q5TGI4 173 aa5.7□□□□□ -1.5
HMGXB4-201ENST00000216106 SPANXA1Q9NS26 97 aa5.7□□□□□ -1.5
HMGXB4-201ENST00000216106 A0A0J9YY99 117 aa5.7□□□□□ -1.5
HMGXB4-201ENST00000216106 RPL36AP83881 106 aaKnown RBP5.7□□□□□ -1.5
HMGXB4-201ENST00000216106 C12orf74Q32Q52 190 aa5.7□□□□□ -1.5
HMGXB4-201ENST00000216106 RPL36ALQ969Q0 106 aaKnown RBP5.7□□□□□ -1.5
HMGXB4-201ENST00000216106 GAGE12JA6NER3 117 aa5.7□□□□□ -1.5
HMGXB4-201ENST00000216106 MRPS36P82909 103 aaKnown RBP5.7□□□□□ -1.5
HMGXB4-201ENST00000216106 GAGE4Q13068 117 aa5.7□□□□□ -1.5
HMGXB4-201ENST00000216106 GAGE5Q13069 117 aa5.7□□□□□ -1.5
HMGXB4-201ENST00000216106 GAGE13Q4V321 117 aa5.7□□□□□ -1.5
HMGXB4-201ENST00000216106 K7EP34 96 aa5.69□□□□□ -1.5
HMGXB4-201ENST00000216106 LEPROTO15243 131 aa5.69□□□□□ -1.5
HMGXB4-201ENST00000216106 GTF2H5Q6ZYL4 71 aa5.69□□□□□ -1.5
HMGXB4-201ENST00000216106 SPCS1Q9Y6A9 102 aa5.69□□□□□ -1.5
HMGXB4-201ENST00000216106 TEP1Q99973 2627 aaKnown RBP5.69□□□□□ -1.5
HMGXB4-201ENST00000216106 TRBV10-1A0A0K0K1A3 114 aa5.69□□□□□ -1.5
HMGXB4-201ENST00000216106 FABP2P12104 132 aa5.69□□□□□ -1.5
HMGXB4-201ENST00000216106 CRYBA4P53673 196 aa5.69□□□□□ -1.5
HMGXB4-201ENST00000216106 TRAV8-3A0A0A6YYJ7 113 aa5.68□□□□□ -1.5
HMGXB4-201ENST00000216106 LINC00694P0DN24 101 aa5.68□□□□□ -1.5
HMGXB4-201ENST00000216106 LOC100131303A0A0U1RQF7 123 aa5.68□□□□□ -1.5
HMGXB4-201ENST00000216106 DGAT2L7PQ6IED9 249 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms