RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Slc25a17O70579 307 aa18.3■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Gm4792Q569Q2 183 aa18.3■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Kcnip4Q6PHZ8 250 aa18.3■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Neil2Q6R2P8 329 aa18.3■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Fam216bQ8CC14 138 aa18.3■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Vmn1r62Q8R2C0 300 aa18.3■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Mpdu1Q9R0Q9 247 aa18.3■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Olfr466E9Q2B9 308 aa18.29■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Degs1O09005 323 aa18.29■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Syngr2O55101 224 aa18.29■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Tmem95P0DJF3 176 aa18.29■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Cd81P35762 236 aa18.29■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Olfr147Q60886 317 aa18.29■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Rab11fip5Q8R361 645 aa18.29■□□□□ 0.52
Upf3a-201ENSMUST00000043767 RfxapQ8VCG9 231 aa18.29■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Fam162bQ9CX19 157 aa18.29■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Opn3Q9WUK7 400 aa18.29■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Trbv19A0A0B4J1H4 117 aa18.29■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Nat8f7E0CYR6 227 aa18.29■□□□□ 0.52
Upf3a-201ENSMUST00000043767 P04212 136 aa18.29■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Spsb3Q571F5 354 aa18.29■□□□□ 0.52
Upf3a-201ENSMUST00000043767 BsxQ810B3 232 aa18.29■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Olfr1537P34983 314 aa18.28■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Ube2e1P52482 193 aa18.28■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Cdc34Q8CFI2 235 aa18.28■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Prrc2cQ3TLH4 2846 aaKnown RBP18.28■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Thap8E9Q695 213 aa18.27■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Gm21974F6W3F3 119 aa18.27■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Csn2P10598 231 aa18.27■□□□□ 0.52
Upf3a-201ENSMUST00000043767 MyocosQ3UWS6 143 aa18.27■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Vmn1r222Q8R269 308 aa18.27■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Rbm7Q9CQT2 265 aaKnown RBP18.27■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Ms4a4cQ9D3F6 226 aa18.27■□□□□ 0.52
Upf3a-201ENSMUST00000043767 HeylQ9DBX7 326 aa18.27■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Ighv14-2A0A075B5R7 117 aa18.27■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Gm20825J3QM67 227 aa18.27■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Smad7O35253 426 aa18.27■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Hoxa1P09022 331 aa18.27■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Ssty1P13675 232 aa18.27■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Rom1P32958 351 aa18.27■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Bmpr1bP36898 502 aa18.27■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Ssty2Q149W4 227 aa18.27■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Gm21394Q497R7 227 aa18.27■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Patz1Q5NBY9 687 aaKnown RBP18.27■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Gm20854Q62461 227 aa18.27■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Spcs3Q6ZWQ7 180 aa18.27■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Wdr83osQ6ZWX0 106 aa18.27■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Q8CF25 301 aa18.27■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Mad2l1bpQ9DCX1 276 aa18.27■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Adcyap1O70176 175 aa18.26■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Znf664Q4VA44 261 aa18.26■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Olfr816Q8VFU2 312 aa18.26■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Pygo1Q9D0P5 417 aa18.26■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Prpf8Q99PV0 2335 aaKnown RBP18.26■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Cd209gD3Z5D4 194 aa18.26■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Foxi3E0CZH3 425 aa18.26■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Tm4sf19E9Q9H8 206 aa18.26■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Gm21244J3QK38 227 aa18.26■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Gm8653K9J7G2 307 aa18.26■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Vmn1r117L7N2C9 307 aa18.26■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Zfp970Q08BU3 522 aa18.26■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Rtl4Q3URY0 304 aa18.26■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Fam174bQ8K064 153 aa18.26■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Ankrd17Q99NH0 2603 aaKnown RBP18.25■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Ighv7-2A0A0A6YX91 119 aa18.25■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Fcrl6A1YIY0 268 aa18.25■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Inafm1E9PV59 130 aa18.25■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Rnf212F6TQD1 307 aa18.25■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Cldn34c3J3QJW5 233 aa18.25■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Gm28051J3QMA2 81 aa18.25■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Cldn34c2J3QNM1 233 aa18.25■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Nkx2-8O70584 235 aa18.25■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Dnajc30P59041 219 aa18.25■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Cldn34c1Q8K193 234 aa18.25■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Vmn1r46Q9EQ45 309 aa18.25■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Gm12169F2Z474 250 aa18.24■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Wnt10aP70701 417 aa18.24■□□□□ 0.51
Upf3a-201ENSMUST00000043767 GaptQ8CB93 157 aa18.24■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Uqcc3Q8K2T4 89 aa18.24■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Vmn1r26Q8R2D7 339 aa18.24■□□□□ 0.51
Upf3a-201ENSMUST00000043767 AmtnQ9D3J8 213 aa18.24■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Olfr364-ps1A0A140T8Q2 307 aa18.24■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Tmem256Q5F285 113 aa18.24■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Olfr509Q8VF20 321 aa18.24■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Ap5s1Q9D742 170 aa18.24■□□□□ 0.51
Upf3a-201ENSMUST00000043767 C2cd3Q52KB6 2323 aa18.24■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Ighv1-20A0A0A6YX66 117 aa18.23■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Gm10020E9QAZ2 204 aa18.23■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Mtco2P00405 227 aaKnown RBP18.23■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Rpl8P62918 257 aaKnown RBP18.23■□□□□ 0.51
Upf3a-201ENSMUST00000043767 CrygcQ61597 174 aa18.23■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Olfr968Q8VFN4 314 aa18.23■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Rpl15Q9CZM2 204 aaKnown RBP18.23■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Fndc10A2A9Q0 223 aa18.22■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Gm5129F6YHA9 99 aa18.22■□□□□ 0.51
Upf3a-201ENSMUST00000043767 P01659 112 aa18.22■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Gnb1P62874 340 aa18.22■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Cnn1Q08091 297 aaKnown RBP18.22■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Ifna12Q80SS5 189 aa18.22■□□□□ 0.51
Upf3a-201ENSMUST00000043767 Sox21Q811W0 276 aa18.22■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 82.4 ms