RNA–Protein interactions for RNA: ENSMUST00000007584.3

Pcdhac1-201, Transcript of Protocadherin alpha C1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac1, Length 5,419 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1-201ENSMUST00000007584 Hoxb2P0C1T1 354 aa10.29□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Tdgf1P51865 171 aa10.29□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Fxyd7P59648 80 aa10.29□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Zfp248Q640N4 576 aa10.29□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Ros1Q78DX7 2340 aa10.29□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Cep290Q6A078 2472 aa10.29□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Gm20517G3UVU6 152 aa10.29□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Fgf4P11403 202 aa10.29□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 CxadrP97792 365 aa10.29□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Bricd5Q8BV89 174 aa10.29□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Vmn1r70Q8R254 298 aa10.29□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Ecm29Q6PDI5 1840 aa10.29□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Nup214Q80U93 2085 aa10.29□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Gm42517A0A1Y7VLQ2 374 aa10.28□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Tac3P55099 116 aa10.28□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Tm4sf4Q91XD3 202 aa10.28□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Tmem141A2AJB2 108 aa10.28□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Rnase2bO35292 155 aa10.28□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 SbpP15501 199 aa10.28□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 H2afb1Q9CQ70 111 aa10.28□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Abca15E9PWH4 1668 aa10.28□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Ighv5-6A0A075B5Q0 117 aa10.28□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Tmem238A9JSM3 176 aa10.28□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Ascl5M0QWB7 188 aa10.28□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Znhit1Q8R331 154 aa10.28□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Trbv3A0A0A6YYE2 117 aa10.28□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Gm867A0A1W2P7T4 151 aa10.28□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 BC030500E9Q6W0 185 aa10.28□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Ccl2P10148 148 aa10.28□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Cacna1sQ02789 1880 aa10.27□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Efnb3O35393 340 aa10.27□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Atp5g2P56383 146 aa10.27□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Defb46Q4QY34 57 aa10.27□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Foxg1Q60987 481 aa10.27□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Gm10283Q8C3L5 117 aa10.27□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 PpbpQ9EQI5 113 aa10.27□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Dock8Q8C147 2100 aa10.27□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Gm11020F6ZGD5 61 aa10.27□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Gm27021M0QWE2 156 aa10.27□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 P01822 137 aa10.27□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Il3raP26952 396 aa10.27□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Trav6-2Q5R1I4 113 aa10.27□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Igfbpl1Q80W15 270 aa10.27□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Dopey2Q3UHQ6 2295 aa10.27□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Gm10203F6QJ09 66 aa10.27□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Cd8bP10300 213 aa10.27□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Efnb1P52795 345 aa10.27□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Pilrb2Q2YFS1 225 aa10.27□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Phf7Q9DAG9 307 aa10.27□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Gm36368A0A1D5RLK8 91 aa10.27□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Gm15128A2ADW8 449 aa10.27□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Srp14P16254 110 aaKnown RBP10.27□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Prr15Q9D1T5 122 aa10.27□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Trbv17A0A140T8P8 114 aa10.26□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 P01759 136 aa10.26□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Fbxl7Q5BJ29 491 aa10.26□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Timm10bQ9WV96 100 aa10.26□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Supt4h1aP63271 117 aa10.26□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Syngr3Q8R191 229 aa10.26□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Ndufa3Q9CQ91 84 aa10.26□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Gtsf1lQ9CWD0 151 aa10.26□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Ankrd31A0A140LI88 1765 aa10.26□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Gpr179E9PY61 2293 aa10.26□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Prb1Q91X93 504 aa10.26□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 EppinQ9DA01 134 aa10.26□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Mettl26Q9DCS2 204 aa10.26□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Scn9aQ62205 1984 aa10.26□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Gm10428J3QNV7 132 aa10.26□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 SNORCQ9CXL7 121 aa10.26□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Hcfc2Q9D968 241 aa10.26□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Tnfrsf23Q9ER63 176 aa10.26□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Ckap5A2AGT5 2032 aaKnown RBP10.26□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Mrps11Q9DCA2 191 aaKnown RBP10.25□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Igkv15-103A0A140T8P3 115 aa10.25□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Efna4O08542 206 aa10.25□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 4930596D02RikQ3V0H9 216 aa10.25□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Zdhhc16Q9ESG8 361 aa10.25□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Cfap44E9Q5M6 1843 aa10.25□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Tmem8bB1AWJ5 472 aa10.25□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Tmem240B2RWJ3 173 aa10.25□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Zfp977L7N2E7 438 aa10.25□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Gm26727M0QWT1 121 aa10.25□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Iglc2P01844 104 aa10.25□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 MdfiP70331 251 aa10.25□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Wdr83osQ6ZWX0 106 aa10.25□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Vmn1r235Q8R297 328 aa10.25□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Lime1Q9EQR5 269 aa10.25□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Gm14548E9Q1Z6 680 aa10.25□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Znrf1Q91V17 227 aa10.25□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Plac1Q9JI83 173 aa10.25□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Plch1Q4KWH5 1682 aa10.25□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Trbv13-3A0A0B4J1H2 113 aa10.24□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Ssc4dA1L0T3 586 aa10.24□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Pax8Q00288 457 aa10.24□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Parm1Q923D3 296 aa10.24□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Scrt1Q99M85 348 aa10.24□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Ss18l2Q9D174 77 aa10.24□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Phlpp1Q8CHE4 1687 aa10.24□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Igkv4-90A0A075B5L3 117 aa10.24□□□□□ -0.77
Pcdhac1-201ENSMUST00000007584 Ighv14-3A0A075B5R9 117 aa10.24□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 109.8 ms