RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 HSPB8Q9UJY1 196 aa13.06□□□□□ -0.32
PHGDH-209ENST00000641074 SMIM9A6NGZ8 99 aa13.05□□□□□ -0.32
PHGDH-209ENST00000641074 H7C1H1 209 aa13.05□□□□□ -0.32
PHGDH-209ENST00000641074 EMP1P54849 157 aa13.05□□□□□ -0.32
PHGDH-209ENST00000641074 ZFP2Q6ZN57 461 aa13.05□□□□□ -0.32
PHGDH-209ENST00000641074 SDHAF1A6NFY7 115 aa13.04□□□□□ -0.32
PHGDH-209ENST00000641074 P0DMU3 169 aa13.04□□□□□ -0.32
PHGDH-209ENST00000641074 FAM231AP0DMU4 169 aa13.04□□□□□ -0.32
PHGDH-209ENST00000641074 FAM231CP0DMU5 169 aa13.04□□□□□ -0.32
PHGDH-209ENST00000641074 BTF3P20290 206 aaKnown RBP13.04□□□□□ -0.32
PHGDH-209ENST00000641074 ZNF479Q96JC4 524 aa13.04□□□□□ -0.32
PHGDH-209ENST00000641074 NBEAL2Q6ZNJ1 2754 aa13.04□□□□□ -0.32
PHGDH-209ENST00000641074 GAGE12BA1L429 117 aa13.04□□□□□ -0.32
PHGDH-209ENST00000641074 GAGE7O76087 117 aa13.04□□□□□ -0.32
PHGDH-209ENST00000641074 GAGE12FP0CL80 117 aa13.04□□□□□ -0.32
PHGDH-209ENST00000641074 GAGE12GP0CL81 117 aa13.04□□□□□ -0.32
PHGDH-209ENST00000641074 GAGE12IP0CL82 117 aa13.04□□□□□ -0.32
PHGDH-209ENST00000641074 TRAV4A0A0B4J268 109 aa13.03□□□□□ -0.32
PHGDH-209ENST00000641074 VCYO14598 125 aa13.03□□□□□ -0.32
PHGDH-209ENST00000641074 IGHV3-53P01767 116 aa13.03□□□□□ -0.32
PHGDH-209ENST00000641074 SAMD5Q5TGI4 173 aa13.03□□□□□ -0.32
PHGDH-209ENST00000641074 K7EMI3 77 aa13.02□□□□□ -0.32
PHGDH-209ENST00000641074 OR11H2Q8NH07 326 aa13.02□□□□□ -0.32
PHGDH-209ENST00000641074 Q9UF83 564 aa13.02□□□□□ -0.32
PHGDH-209ENST00000641074 TRGV2A0A075B6R0 118 aa13.02□□□□□ -0.33
PHGDH-209ENST00000641074 TRBV27A0A0K0K1C4 114 aa13.02□□□□□ -0.33
PHGDH-209ENST00000641074 SYS1-DBNDD2H3BUS1 97 aa13.02□□□□□ -0.33
PHGDH-209ENST00000641074 ORMDL2Q53FV1 153 aa13.02□□□□□ -0.33
PHGDH-209ENST00000641074 SPATA12Q7Z6I5 190 aa13.02□□□□□ -0.33
PHGDH-209ENST00000641074 MAP1LC3CQ9BXW4 147 aa13.02□□□□□ -0.33
PHGDH-209ENST00000641074 A8MZ25 164 aa13.01□□□□□ -0.33
PHGDH-209ENST00000641074 NUDT3O95989 172 aa13.01□□□□□ -0.33
PHGDH-209ENST00000641074 DEFB104AQ8WTQ1 72 aa13.01□□□□□ -0.33
PHGDH-209ENST00000641074 DNAH3Q8TD57 4116 aa13□□□□□ -0.33
PHGDH-209ENST00000641074 RNF183Q96D59 192 aa13□□□□□ -0.33
PHGDH-209ENST00000641074 C18orf15Q96N68 181 aa12.99□□□□□ -0.33
PHGDH-209ENST00000641074 KIR2DL4Q99706 377 aa12.99□□□□□ -0.33
PHGDH-209ENST00000641074 NEXN-AS1Q8NBZ9 246 aa12.99□□□□□ -0.33
PHGDH-209ENST00000641074 TNFRSF18Q9Y5U5 241 aa12.99□□□□□ -0.33
PHGDH-209ENST00000641074 H0Y8G0 127 aa12.98□□□□□ -0.33
PHGDH-209ENST00000641074 IFI27L1Q96BM0 104 aa12.98□□□□□ -0.33
PHGDH-209ENST00000641074 IGHV4-28A0A0C4DH34 117 aa12.97□□□□□ -0.33
PHGDH-209ENST00000641074 PET117Q6UWS5 81 aa12.97□□□□□ -0.33
PHGDH-209ENST00000641074 TEX43Q6ZNM6 134 aa12.97□□□□□ -0.33
PHGDH-209ENST00000641074 LINC00612Q8N6U2 182 aa12.97□□□□□ -0.33
PHGDH-209ENST00000641074 I3L3M4 83 aa12.97□□□□□ -0.33
PHGDH-209ENST00000641074 DEFB4AO15263 64 aa12.97□□□□□ -0.33
PHGDH-209ENST00000641074 DEFB130BP0DP73 79 aa12.97□□□□□ -0.33
PHGDH-209ENST00000641074 DEFB130AP0DP74 79 aa12.97□□□□□ -0.33
PHGDH-209ENST00000641074 S100A12P80511 92 aa12.97□□□□□ -0.33
PHGDH-209ENST00000641074 DNAJC30Q96LL9 226 aa12.97□□□□□ -0.33
PHGDH-209ENST00000641074 TSHBP01222 138 aa12.96□□□□□ -0.34
PHGDH-209ENST00000641074 MIFP14174 115 aa12.96□□□□□ -0.34
PHGDH-209ENST00000641074 Q8NAQ8 132 aa12.96□□□□□ -0.34
PHGDH-209ENST00000641074 TOMM6Q96B49 74 aa12.96□□□□□ -0.34
PHGDH-209ENST00000641074 CIDEAO60543 219 aa12.95□□□□□ -0.34
PHGDH-209ENST00000641074 FAM222AQ5U5X8 452 aa12.95□□□□□ -0.34
PHGDH-209ENST00000641074 C2orf66Q6UXQ4 117 aa12.95□□□□□ -0.34
PHGDH-209ENST00000641074 SLC25A29Q8N8R3 303 aa12.95□□□□□ -0.34
PHGDH-209ENST00000641074 K7EQD1 137 aa12.94□□□□□ -0.34
PHGDH-209ENST00000641074 LYRM9A8MSI8 78 aa12.94□□□□□ -0.34
PHGDH-209ENST00000641074 ATOH7Q8N100 152 aa12.94□□□□□ -0.34
PHGDH-209ENST00000641074 TRBV10-1A0A0K0K1A3 114 aa12.93□□□□□ -0.34
PHGDH-209ENST00000641074 C20orf202A1L168 122 aa12.93□□□□□ -0.34
PHGDH-209ENST00000641074 PCP4L1A6NKN8 68 aa12.93□□□□□ -0.34
PHGDH-209ENST00000641074 ATP5LO75964 103 aa12.93□□□□□ -0.34
PHGDH-209ENST00000641074 FHL2Q14192 279 aa12.93□□□□□ -0.34
PHGDH-209ENST00000641074 LINC01545Q5VT33 79 aa12.93□□□□□ -0.34
PHGDH-209ENST00000641074 ZNF664Q8N3J9 261 aa12.93□□□□□ -0.34
PHGDH-209ENST00000641074 NOTCH1P46531 2555 aa12.93□□□□□ -0.34
PHGDH-209ENST00000641074 TRGV4A0A0C4DH28 118 aa12.92□□□□□ -0.34
PHGDH-209ENST00000641074 RIPPLY3P57055 190 aa12.92□□□□□ -0.34
PHGDH-209ENST00000641074 RHOHQ15669 191 aa12.92□□□□□ -0.34
PHGDH-209ENST00000641074 ZNRF2Q8NHG8 242 aa12.92□□□□□ -0.34
PHGDH-209ENST00000641074 SCGB3A1Q96QR1 104 aa12.92□□□□□ -0.34
PHGDH-209ENST00000641074 PMCHL2Q9BQD1 86 aa12.92□□□□□ -0.34
PHGDH-209ENST00000641074 DKK2Q9UBU2 259 aa12.92□□□□□ -0.34
PHGDH-209ENST00000641074 G0S2P27469 103 aa12.92□□□□□ -0.34
PHGDH-209ENST00000641074 CYSLTR1Q9Y271 337 aa12.92□□□□□ -0.34
PHGDH-209ENST00000641074 TP53TG1Q9Y2A0 90 aa12.92□□□□□ -0.34
PHGDH-209ENST00000641074 TRBV7-3A0A075B6L6 115 aa12.91□□□□□ -0.34
PHGDH-209ENST00000641074 TRBV6-4A0A1B0GX49 114 aa12.91□□□□□ -0.34
PHGDH-209ENST00000641074 PRB2P02812 416 aaPredicted RBP12.91□□□□□ -0.34
PHGDH-209ENST00000641074 RPL39P62891 51 aaKnown RBP12.91□□□□□ -0.34
PHGDH-209ENST00000641074 PHLDA1Q8WV24 401 aaPredicted RBP12.91□□□□□ -0.34
PHGDH-209ENST00000641074 RETNQ9HD89 108 aa12.91□□□□□ -0.34
PHGDH-209ENST00000641074 IGHV3-38A0A0C4DH36 116 aa12.9□□□□□ -0.34
PHGDH-209ENST00000641074 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.9□□□□□ -0.34
PHGDH-209ENST00000641074 PRSS1P07477 247 aa12.9□□□□□ -0.34
PHGDH-209ENST00000641074 RPL36AP83881 106 aaKnown RBP12.9□□□□□ -0.34
PHGDH-209ENST00000641074 RPL36ALQ969Q0 106 aaKnown RBP12.9□□□□□ -0.34
PHGDH-209ENST00000641074 VAMP8Q9BV40 100 aa12.9□□□□□ -0.34
PHGDH-209ENST00000641074 LGALS9CQ6DKI2 356 aa12.89□□□□□ -0.35
PHGDH-209ENST00000641074 PRO1933Q9H354 126 aa12.89□□□□□ -0.35
PHGDH-209ENST00000641074 PAM16Q9Y3D7 125 aa12.89□□□□□ -0.35
PHGDH-209ENST00000641074 NBEAL1Q6ZS30 2694 aa12.89□□□□□ -0.35
PHGDH-209ENST00000641074 GAGE12JA6NER3 117 aa12.89□□□□□ -0.35
PHGDH-209ENST00000641074 GAGE1Q13065 139 aa12.89□□□□□ -0.35
PHGDH-209ENST00000641074 GAGE4Q13068 117 aa12.89□□□□□ -0.35
PHGDH-209ENST00000641074 GAGE5Q13069 117 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 261.8 ms