RNA–Protein interactions for RNA: ENST00000640218.1

HNRNPU-226, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-226ENST00000640218 MED14OSP0DP75 135 aa11.24□□□□□ -0.61
HNRNPU-226ENST00000640218 DNAJC9-AS1A6NH13 148 aa11.24□□□□□ -0.61
HNRNPU-226ENST00000640218 ACYP1P07311 99 aa11.24□□□□□ -0.61
HNRNPU-226ENST00000640218 SPAG11BQ08648 103 aa11.24□□□□□ -0.61
HNRNPU-226ENST00000640218 IGKV3D-7A0A0C4DH55 119 aa11.23□□□□□ -0.61
HNRNPU-226ENST00000640218 FXYD2P54710 66 aa11.23□□□□□ -0.61
HNRNPU-226ENST00000640218 TMEM263Q8WUH6 116 aaKnown RBP11.23□□□□□ -0.61
HNRNPU-226ENST00000640218 A0A0J9YX75 114 aa11.23□□□□□ -0.61
HNRNPU-226ENST00000640218 FBXL19-AS1Q494R0 122 aa11.23□□□□□ -0.61
HNRNPU-226ENST00000640218 TM2D2Q9BX73 214 aa11.23□□□□□ -0.61
HNRNPU-226ENST00000640218 MAP6D1Q9H9H5 199 aa11.22□□□□□ -0.61
HNRNPU-226ENST00000640218 ZNF106Q9H2Y7 1883 aaKnown RBP11.22□□□□□ -0.61
HNRNPU-226ENST00000640218 NDUFB1O75438 58 aa11.22□□□□□ -0.61
HNRNPU-226ENST00000640218 TNRC6BQ9UPQ9 1833 aaKnown RBP11.22□□□□□ -0.61
HNRNPU-226ENST00000640218 TMEM131Q92545 1883 aa11.21□□□□□ -0.61
HNRNPU-226ENST00000640218 C11orf86A6NJI1 115 aa11.21□□□□□ -0.61
HNRNPU-226ENST00000640218 NREPQ16612 68 aa11.21□□□□□ -0.61
HNRNPU-226ENST00000640218 E9PLD3 99 aa11.21□□□□□ -0.61
HNRNPU-226ENST00000640218 FRMD6-AS1P0C7T7 363 aa11.21□□□□□ -0.61
HNRNPU-226ENST00000640218 LINC01548A6NM66 108 aa11.2□□□□□ -0.62
HNRNPU-226ENST00000640218 MIR7-3HGQ8N6C7 128 aa11.2□□□□□ -0.62
HNRNPU-226ENST00000640218 A0A0B4J2C4 111 aa11.2□□□□□ -0.62
HNRNPU-226ENST00000640218 LECT2O14960 151 aa11.2□□□□□ -0.62
HNRNPU-226ENST00000640218 LINC01620Q4KN68 170 aa11.2□□□□□ -0.62
HNRNPU-226ENST00000640218 PRO0255Q9UI72 69 aa11.2□□□□□ -0.62
HNRNPU-226ENST00000640218 CXCL5P42830 114 aa11.19□□□□□ -0.62
HNRNPU-226ENST00000640218 TMEM258P61165 79 aa11.19□□□□□ -0.62
HNRNPU-226ENST00000640218 CEMP1Q6PRD7 247 aaPredicted RBP11.19□□□□□ -0.62
HNRNPU-226ENST00000640218 CCDC140Q96MF4 163 aa11.19□□□□□ -0.62
HNRNPU-226ENST00000640218 CLEC2BQ92478 149 aa11.19□□□□□ -0.62
HNRNPU-226ENST00000640218 LGALS9O00182 355 aa11.19□□□□□ -0.62
HNRNPU-226ENST00000640218 IGKV1D-37A0A075B6S9 117 aa11.18□□□□□ -0.62
HNRNPU-226ENST00000640218 INSL3P51460 131 aa11.18□□□□□ -0.62
HNRNPU-226ENST00000640218 C5orf47Q569G3 176 aa11.18□□□□□ -0.62
HNRNPU-226ENST00000640218 C11orf45Q8TAV5 145 aa11.18□□□□□ -0.62
HNRNPU-226ENST00000640218 DIRC1Q969H9 104 aa11.18□□□□□ -0.62
HNRNPU-226ENST00000640218 TP53TG3Q9ULZ0 132 aa11.18□□□□□ -0.62
HNRNPU-226ENST00000640218 TRBV6-1A0A0K0K1D8 114 aa11.18□□□□□ -0.62
HNRNPU-226ENST00000640218 P0DMU3 169 aa11.18□□□□□ -0.62
HNRNPU-226ENST00000640218 FAM231AP0DMU4 169 aa11.18□□□□□ -0.62
HNRNPU-226ENST00000640218 FAM231CP0DMU5 169 aa11.18□□□□□ -0.62
HNRNPU-226ENST00000640218 C19orf84I3L1E1 186 aa11.18□□□□□ -0.62
HNRNPU-226ENST00000640218 TNFRSF13BO14836 293 aaPredicted RBP11.18□□□□□ -0.62
HNRNPU-226ENST00000640218 CHKB-CPT1BH3BT56 60 aa11.18□□□□□ -0.62
HNRNPU-226ENST00000640218 ODF1Q14990 250 aa11.18□□□□□ -0.62
HNRNPU-226ENST00000640218 IGHV1-58A0A0C4DH39 117 aa11.18□□□□□ -0.62
HNRNPU-226ENST00000640218 LMO4P61968 165 aa11.18□□□□□ -0.62
HNRNPU-226ENST00000640218 NCOA6Q14686 2063 aaPredicted RBP11.18□□□□□ -0.62
HNRNPU-226ENST00000640218 KIAA1549LQ6ZVL6 1849 aa11.18□□□□□ -0.62
HNRNPU-226ENST00000640218 LOXL1Q08397 574 aaPredicted RBP11.18□□□□□ -0.62
HNRNPU-226ENST00000640218 C19orf71A6NCJ1 209 aa11.17□□□□□ -0.62
HNRNPU-226ENST00000640218 WFDC2Q14508 124 aa11.17□□□□□ -0.62
HNRNPU-226ENST00000640218 HIGD1BQ9P298 99 aa11.17□□□□□ -0.62
HNRNPU-226ENST00000640218 TECTAO75443 2155 aa11.17□□□□□ -0.62
HNRNPU-226ENST00000640218 H3BQ85 93 aa11.17□□□□□ -0.62
HNRNPU-226ENST00000640218 SMR3AQ99954 134 aa11.17□□□□□ -0.62
HNRNPU-226ENST00000640218 Q6ZUT4 128 aa11.17□□□□□ -0.62
HNRNPU-226ENST00000640218 COL4A3Q01955 1670 aa11.17□□□□□ -0.62
HNRNPU-226ENST00000640218 ATRXP46100 2492 aa11.17□□□□□ -0.62
HNRNPU-226ENST00000640218 C20orf203Q8NBC4 194 aa11.16□□□□□ -0.62
HNRNPU-226ENST00000640218 B5MCH6 92 aa11.16□□□□□ -0.62
HNRNPU-226ENST00000640218 ZNF80P51504 273 aaPredicted RBP11.16□□□□□ -0.62
HNRNPU-226ENST00000640218 ODF3BA8MYP8 253 aa11.16□□□□□ -0.62
HNRNPU-226ENST00000640218 PSMB8P28062 276 aa11.16□□□□□ -0.62
HNRNPU-226ENST00000640218 A0A1B0GX51 115 aa11.15□□□□□ -0.62
HNRNPU-226ENST00000640218 HIGD2BQ4VC39 106 aa11.15□□□□□ -0.62
HNRNPU-226ENST00000640218 WFDC9Q8NEX5 89 aa11.15□□□□□ -0.62
HNRNPU-226ENST00000640218 SHISA2Q6UWI4 295 aa11.15□□□□□ -0.62
HNRNPU-226ENST00000640218 TEN1Q86WV5 123 aa11.15□□□□□ -0.62
HNRNPU-226ENST00000640218 TRAV26-1A0A087WT03 109 aa11.15□□□□□ -0.63
HNRNPU-226ENST00000640218 NFE4Q86UQ8 179 aa11.15□□□□□ -0.63
HNRNPU-226ENST00000640218 MP68P56378 58 aa11.14□□□□□ -0.63
HNRNPU-226ENST00000640218 DSCAML1Q8TD84 2053 aa11.14□□□□□ -0.63
HNRNPU-226ENST00000640218 Q6ZTI0 123 aa11.14□□□□□ -0.63
HNRNPU-226ENST00000640218 C11orf1Q9H5F2 150 aa11.14□□□□□ -0.63
HNRNPU-226ENST00000640218 IGHV4-31P0DP07 118 aa11.14□□□□□ -0.63
HNRNPU-226ENST00000640218 TRBV10-1A0A0K0K1A3 114 aa11.14□□□□□ -0.63
HNRNPU-226ENST00000640218 NDUFA11Q86Y39 141 aa11.14□□□□□ -0.63
HNRNPU-226ENST00000640218 JMJD7-PLA2G4BH0Y9G9 81 aa11.13□□□□□ -0.63
HNRNPU-226ENST00000640218 IGKV2-24A0A0C4DH68 120 aa11.13□□□□□ -0.63
HNRNPU-226ENST00000640218 BDP1A6H8Y1 2624 aa11.12□□□□□ -0.63
HNRNPU-226ENST00000640218 Q6YL49 198 aa11.12□□□□□ -0.63
HNRNPU-226ENST00000640218 LINC00269Q8N2A0 174 aa11.12□□□□□ -0.63
HNRNPU-226ENST00000640218 C14orf132Q9NPU4 83 aa11.12□□□□□ -0.63
HNRNPU-226ENST00000640218 LINC00322Q6ZN03 302 aaPredicted RBP11.12□□□□□ -0.63
HNRNPU-226ENST00000640218 TRBV10-2A0A0K0K1G8 114 aa11.12□□□□□ -0.63
HNRNPU-226ENST00000640218 FAM236AA0A1B0GUQ0 79 aa11.12□□□□□ -0.63
HNRNPU-226ENST00000640218 FAM236BA0A1B0GV22 79 aa11.12□□□□□ -0.63
HNRNPU-226ENST00000640218 SS18L2Q9UHA2 77 aa11.12□□□□□ -0.63
HNRNPU-226ENST00000640218 HILS1P60008 231 aa11.12□□□□□ -0.63
HNRNPU-226ENST00000640218 PCDH15Q96QU1 1955 aa11.12□□□□□ -0.63
HNRNPU-226ENST00000640218 TAX1BP3O14907 124 aa11.11□□□□□ -0.63
HNRNPU-226ENST00000640218 P0C879 139 aa11.11□□□□□ -0.63
HNRNPU-226ENST00000640218 C22orf34Q6ZV56 151 aa11.11□□□□□ -0.63
HNRNPU-226ENST00000640218 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.11□□□□□ -0.63
HNRNPU-226ENST00000640218 TMEM256-PLSCR3K7ERE1 68 aa11.11□□□□□ -0.63
HNRNPU-226ENST00000640218 FAM222AQ5U5X8 452 aa11.1□□□□□ -0.63
HNRNPU-226ENST00000640218 ATOX1O00244 68 aa11.1□□□□□ -0.63
HNRNPU-226ENST00000640218 C1orf229Q6ZS94 237 aaPredicted RBP11.1□□□□□ -0.63
HNRNPU-226ENST00000640218 COX7BP24311 80 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms