RNA–Protein interactions for RNA: ENST00000637533.1

MECP2-222, Transcript of methyl-CpG binding protein 2, human

TSL 5

Gene MECP2, Length 140 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MECP2-222	ENST00000637533	FREM3	P0C091	2139 aa		0.85	□□□□□ -2.27
MECP2-222	ENST00000637533	MYH9	P35579	1960 aa	Known RBP	0.85	□□□□□ -2.27
MECP2-222	ENST00000637533	TP53BP1	Q12888	1972 aa	Predicted RBP	0.85	□□□□□ -2.27
MECP2-222	ENST00000637533	SPHKAP	Q2M3C7	1700 aa		0.84	□□□□□ -2.27
MECP2-222	ENST00000637533	MARF1	Q9Y4F3	1742 aa	Known RBP	0.84	□□□□□ -2.27
MECP2-222	ENST00000637533	ANAPC1	Q9H1A4	1944 aa		0.84	□□□□□ -2.27
MECP2-222	ENST00000637533	EEA1	Q15075	1411 aa		0.84	□□□□□ -2.27
MECP2-222	ENST00000637533	N4BP2	Q86UW6	1770 aa	Predicted RBP	0.84	□□□□□ -2.27
MECP2-222	ENST00000637533	KRTAP4-8	A0A0G2JLE6	195 aa		0.84	□□□□□ -2.27
MECP2-222	ENST00000637533	CTXND1	A0A1B0GTU2	59 aa		0.84	□□□□□ -2.27
MECP2-222	ENST00000637533	FXYD1	O00168	92 aa		0.84	□□□□□ -2.27
MECP2-222	ENST00000637533	HCRT	O43612	131 aa		0.84	□□□□□ -2.27
MECP2-222	ENST00000637533	KRTAP13-3	Q3SY46	172 aa		0.84	□□□□□ -2.27
MECP2-222	ENST00000637533	C10orf113	Q5VZT2	155 aa		0.84	□□□□□ -2.27
MECP2-222	ENST00000637533	CSAG1	Q6PB30	78 aa		0.84	□□□□□ -2.27
MECP2-222	ENST00000637533	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		0.84	□□□□□ -2.27
MECP2-222	ENST00000637533	C20orf197	Q8N268	126 aa		0.84	□□□□□ -2.27
MECP2-222	ENST00000637533	SMIM11B	Q8TCY0	68 aa		0.84	□□□□□ -2.27
MECP2-222	ENST00000637533	ZNF625	Q96I27	306 aa	Predicted RBP	0.84	□□□□□ -2.27
MECP2-222	ENST00000637533	KRTAP9-9	Q9BYP9	154 aa		0.84	□□□□□ -2.27
MECP2-222	ENST00000637533	KRTAP9-2	Q9BYQ4	174 aa		0.84	□□□□□ -2.27
MECP2-222	ENST00000637533	CDC42SE2	Q9NRR3	84 aa		0.84	□□□□□ -2.27
MECP2-222	ENST00000637533	SPCS1	Q9Y6A9	102 aa		0.84	□□□□□ -2.27
MECP2-222	ENST00000637533	PTPN23	Q9H3S7	1636 aa		0.84	□□□□□ -2.28
MECP2-222	ENST00000637533	MAP3K4	Q9Y6R4	1608 aa		0.84	□□□□□ -2.28
MECP2-222	ENST00000637533	NKTR	P30414	1462 aa	Known RBP	0.84	□□□□□ -2.28
MECP2-222	ENST00000637533	ZNF646	O15015	1829 aa	Predicted RBP	0.84	□□□□□ -2.28
MECP2-222	ENST00000637533	KIAA1549L	Q6ZVL6	1849 aa		0.84	□□□□□ -2.28
MECP2-222	ENST00000637533	NUP205	Q92621	2012 aa		0.84	□□□□□ -2.28
MECP2-222	ENST00000637533	SCN3A	Q9NY46	2000 aa		0.84	□□□□□ -2.28
MECP2-222	ENST00000637533	ZNF142	P52746	1687 aa	Predicted RBP	0.84	□□□□□ -2.28
MECP2-222	ENST00000637533	QRICH2	Q9H0J4	1663 aa		0.84	□□□□□ -2.28
MECP2-222	ENST00000637533	CACNA1S	Q13698	1873 aa		0.84	□□□□□ -2.28
MECP2-222	ENST00000637533	MAP3K1	Q13233	1512 aa		0.84	□□□□□ -2.28
MECP2-222	ENST00000637533	CDK13	Q14004	1512 aa	Known RBP	0.84	□□□□□ -2.28
MECP2-222	ENST00000637533	KDM5D	Q9BY66	1539 aa		0.84	□□□□□ -2.28
MECP2-222	ENST00000637533	NACA	E9PAV3	2078 aa		0.84	□□□□□ -2.28
MECP2-222	ENST00000637533	NWD2	Q9ULI1	1742 aa		0.84	□□□□□ -2.28
MECP2-222	ENST00000637533	ADAMTS9	Q9P2N4	1935 aa		0.83	□□□□□ -2.28
MECP2-222	ENST00000637533	CUL9	Q8IWT3	2517 aa		0.83	□□□□□ -2.28
MECP2-222	ENST00000637533	PTPRB	P23467	1997 aa		0.83	□□□□□ -2.28
MECP2-222	ENST00000637533	SCN9A	Q15858	1988 aa		0.83	□□□□□ -2.28
MECP2-222	ENST00000637533	SEC16A	O15027	2179 aa		0.83	□□□□□ -2.28
MECP2-222	ENST00000637533	CASKIN1	Q8WXD9	1431 aa		0.83	□□□□□ -2.28
MECP2-222	ENST00000637533	SPRR5	A0A1B0GTR4	108 aa		0.83	□□□□□ -2.28
MECP2-222	ENST00000637533		A0A1B0GVY2	172 aa		0.83	□□□□□ -2.28
MECP2-222	ENST00000637533	IGLC7	A0M8Q6	106 aa		0.83	□□□□□ -2.28
MECP2-222	ENST00000637533		D6R8Y8	96 aa		0.83	□□□□□ -2.28
MECP2-222	ENST00000637533	HMGN4	O00479	90 aa		0.83	□□□□□ -2.28
MECP2-222	ENST00000637533	MT-ATP8	P03928	68 aa		0.83	□□□□□ -2.28
MECP2-222	ENST00000637533	CCL18	P55774	89 aa		0.83	□□□□□ -2.28
MECP2-222	ENST00000637533	FXYD4	P59646	89 aa		0.83	□□□□□ -2.28
MECP2-222	ENST00000637533	FXYD3	Q14802	87 aa		0.83	□□□□□ -2.28
MECP2-222	ENST00000637533	TPRXL	Q17RH7	258 aa		0.83	□□□□□ -2.28
MECP2-222	ENST00000637533	SMIM5	Q71RC9	77 aa		0.83	□□□□□ -2.28
MECP2-222	ENST00000637533	MUSTN1	Q8IVN3	82 aa		0.83	□□□□□ -2.28
MECP2-222	ENST00000637533	TMEM263	Q8WUH6	116 aa	Known RBP	0.83	□□□□□ -2.28
MECP2-222	ENST00000637533	WFDC6	Q9BQY6	131 aa		0.83	□□□□□ -2.28
MECP2-222	ENST00000637533	PROK2	Q9HC23	129 aa		0.83	□□□□□ -2.28
MECP2-222	ENST00000637533	NDUFA4L2	Q9NRX3	87 aa		0.83	□□□□□ -2.28
MECP2-222	ENST00000637533	LINC01558	Q9Y6Z2	57 aa		0.83	□□□□□ -2.28
MECP2-222	ENST00000637533	MYH7	P12883	1935 aa		0.83	□□□□□ -2.28
MECP2-222	ENST00000637533	GREB1	Q4ZG55	1949 aa		0.83	□□□□□ -2.28
MECP2-222	ENST00000637533	COL24A1	Q17RW2	1714 aa		0.83	□□□□□ -2.28
MECP2-222	ENST00000637533	CUX1	P39880	1505 aa		0.83	□□□□□ -2.28
MECP2-222	ENST00000637533	LAMB1	P07942	1786 aa		0.83	□□□□□ -2.28
MECP2-222	ENST00000637533	EDC4	Q6P2E9	1401 aa	Known RBP	0.82	□□□□□ -2.28
MECP2-222	ENST00000637533	MYH7B	A7E2Y1	1941 aa		0.82	□□□□□ -2.28
MECP2-222	ENST00000637533	GOLGA3	Q08378	1498 aa		0.82	□□□□□ -2.28
MECP2-222	ENST00000637533	COL4A2	P08572	1712 aa		0.82	□□□□□ -2.28
MECP2-222	ENST00000637533	KIAA1551	Q9HCM1	1747 aa		0.82	□□□□□ -2.28
MECP2-222	ENST00000637533		A0A0D9SFI3	127 aa		0.82	□□□□□ -2.28
MECP2-222	ENST00000637533		A0A0G2JND7	137 aa		0.82	□□□□□ -2.28
MECP2-222	ENST00000637533	TRBV6-1	A0A0K0K1D8	114 aa		0.82	□□□□□ -2.28
MECP2-222	ENST00000637533	CEBPZOS	A8MTT3	80 aa		0.82	□□□□□ -2.28
MECP2-222	ENST00000637533		M0R135	149 aa		0.82	□□□□□ -2.28
MECP2-222	ENST00000637533	CFD	P00746	253 aa	Predicted RBP	0.82	□□□□□ -2.28
MECP2-222	ENST00000637533	SMIM13	P0DJ93	91 aa		0.82	□□□□□ -2.28
MECP2-222	ENST00000637533	ACYP2	P14621	99 aa		0.82	□□□□□ -2.28
MECP2-222	ENST00000637533	GCHFR	P30047	84 aa		0.82	□□□□□ -2.28
MECP2-222	ENST00000637533	EFNA4	P52798	201 aa		0.82	□□□□□ -2.28
MECP2-222	ENST00000637533	KRTAP4-7	Q9BYR0	210 aa		0.82	□□□□□ -2.28
MECP2-222	ENST00000637533	PSENEN	Q9NZ42	101 aa		0.82	□□□□□ -2.28
MECP2-222	ENST00000637533	ARL2-SNX15	V9GYD0	113 aa		0.82	□□□□□ -2.28
MECP2-222	ENST00000637533	EHBP1L1	Q8N3D4	1523 aa		0.82	□□□□□ -2.28
MECP2-222	ENST00000637533	AKAP12	Q02952	1782 aa		0.82	□□□□□ -2.28
MECP2-222	ENST00000637533	LAMC3	Q9Y6N6	1575 aa		0.82	□□□□□ -2.28
MECP2-222	ENST00000637533	PLXNA3	P51805	1871 aa		0.82	□□□□□ -2.28
MECP2-222	ENST00000637533	LCT	P09848	1927 aa		0.81	□□□□□ -2.28
MECP2-222	ENST00000637533	CLTC	Q00610	1675 aa	Known RBP	0.81	□□□□□ -2.28
MECP2-222	ENST00000637533	HFM1	A2PYH4	1435 aa		0.81	□□□□□ -2.28
MECP2-222	ENST00000637533	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	0.81	□□□□□ -2.28
MECP2-222	ENST00000637533	PTPRM	P28827	1452 aa		0.81	□□□□□ -2.28
MECP2-222	ENST00000637533	TRAV1-2	A0A0B4J238	106 aa		0.81	□□□□□ -2.28
MECP2-222	ENST00000637533	TRAV22	A0A0B4J277	110 aa		0.81	□□□□□ -2.28
MECP2-222	ENST00000637533	MYMX	A0A1B0GTQ4	84 aa		0.81	□□□□□ -2.28
MECP2-222	ENST00000637533		A0A1B0GUT8	65 aa		0.81	□□□□□ -2.28
MECP2-222	ENST00000637533		B4DSR2	109 aa		0.81	□□□□□ -2.28
MECP2-222	ENST00000637533		H7BZZ5	65 aa		0.81	□□□□□ -2.28
MECP2-222	ENST00000637533	LEPROTL1	O95214	131 aa		0.81	□□□□□ -2.28

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