RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 NXPH4O95158 308 aa5.3□□□□□ -1.56
BRCA1-230ENST00000634433 CD7P09564 240 aa5.3□□□□□ -1.56
BRCA1-230ENST00000634433 RNASE3P12724 160 aaKnown RBP5.3□□□□□ -1.56
BRCA1-230ENST00000634433 FCER1GP30273 86 aa5.3□□□□□ -1.56
BRCA1-230ENST00000634433 DEFB114Q30KQ6 69 aa5.3□□□□□ -1.56
BRCA1-230ENST00000634433 C20orf78Q9BR46 151 aa5.3□□□□□ -1.56
BRCA1-230ENST00000634433 TLN2Q9Y4G6 2542 aa5.3□□□□□ -1.56
BRCA1-230ENST00000634433 FLNAP21333 2647 aaKnown RBP5.3□□□□□ -1.56
BRCA1-230ENST00000634433 TRGV11A0A075B6L2 103 aa5.3□□□□□ -1.56
BRCA1-230ENST00000634433 K7EMI3 77 aa5.3□□□□□ -1.56
BRCA1-230ENST00000634433 HLA-DRB4P13762 266 aa5.3□□□□□ -1.56
BRCA1-230ENST00000634433 CMC4P56277 68 aaPredicted RBP5.3□□□□□ -1.56
BRCA1-230ENST00000634433 DEFB131AP59861 70 aa5.3□□□□□ -1.56
BRCA1-230ENST00000634433 HILS1P60008 231 aa5.3□□□□□ -1.56
BRCA1-230ENST00000634433 LINC01545Q5VT33 79 aa5.3□□□□□ -1.56
BRCA1-230ENST00000634433 LINC00173Q6ZV60 143 aa5.3□□□□□ -1.56
BRCA1-230ENST00000634433 ST20Q9HBF5 79 aa5.3□□□□□ -1.56
BRCA1-230ENST00000634433 HLA-DRB4X5D2U9 266 aa5.3□□□□□ -1.56
BRCA1-230ENST00000634433 A8MTW9 85 aa5.29□□□□□ -1.56
BRCA1-230ENST00000634433 M0R143 59 aa5.29□□□□□ -1.56
BRCA1-230ENST00000634433 IGKV3-20P01619 116 aa5.29□□□□□ -1.56
BRCA1-230ENST00000634433 NRACQ8N912 160 aa5.29□□□□□ -1.56
BRCA1-230ENST00000634433 LINC01006Q8NI28 216 aa5.29□□□□□ -1.56
BRCA1-230ENST00000634433 IFI27L1Q96BM0 104 aa5.29□□□□□ -1.56
BRCA1-230ENST00000634433 DNHD1Q96M86 4753 aa5.29□□□□□ -1.56
BRCA1-230ENST00000634433 B5MCH6 92 aa5.29□□□□□ -1.56
BRCA1-230ENST00000634433 IGLC3P0DOY3 106 aa5.29□□□□□ -1.56
BRCA1-230ENST00000634433 CD28P10747 220 aa5.29□□□□□ -1.56
BRCA1-230ENST00000634433 LAGE3Q14657 143 aa5.29□□□□□ -1.56
BRCA1-230ENST00000634433 SPINK13Q1W4C9 94 aa5.29□□□□□ -1.56
BRCA1-230ENST00000634433 LGALS9BQ3B8N2 356 aa5.29□□□□□ -1.56
BRCA1-230ENST00000634433 C1orf195Q5TG92 126 aa5.29□□□□□ -1.56
BRCA1-230ENST00000634433 LGALS9CQ6DKI2 356 aa5.29□□□□□ -1.56
BRCA1-230ENST00000634433 TMEM61Q8N0U2 210 aa5.29□□□□□ -1.56
BRCA1-230ENST00000634433 ATOH7Q8N100 152 aa5.29□□□□□ -1.56
BRCA1-230ENST00000634433 C14orf178Q8N769 122 aaPredicted RBP5.29□□□□□ -1.56
BRCA1-230ENST00000634433 POM121L12Q8N7R1 296 aa5.29□□□□□ -1.56
BRCA1-230ENST00000634433 A0A096LNJ9 63 aa5.28□□□□□ -1.56
BRCA1-230ENST00000634433 IGHV3-16A0A0C4DH30 117 aa5.28□□□□□ -1.56
BRCA1-230ENST00000634433 H3BMM0 161 aa5.28□□□□□ -1.56
BRCA1-230ENST00000634433 MGPP08493 103 aa5.28□□□□□ -1.56
BRCA1-230ENST00000634433 GATA1P15976 413 aaPredicted RBP5.28□□□□□ -1.56
BRCA1-230ENST00000634433 AMTNQ6UX39 209 aa5.28□□□□□ -1.56
BRCA1-230ENST00000634433 C9orf85Q96MD7 179 aa5.28□□□□□ -1.56
BRCA1-230ENST00000634433 SONP18583 2426 aaKnown RBP5.28□□□□□ -1.56
BRCA1-230ENST00000634433 IGLV2-18A0A075B6J9 118 aa5.28□□□□□ -1.56
BRCA1-230ENST00000634433 ORMDL2Q53FV1 153 aa5.28□□□□□ -1.56
BRCA1-230ENST00000634433 MTURNQ8N3F0 131 aa5.28□□□□□ -1.56
BRCA1-230ENST00000634433 ZNF469Q96JG9 3925 aaPredicted RBP5.27□□□□□ -1.57
BRCA1-230ENST00000634433 TRAV12-2A0A075B6T6 113 aa5.27□□□□□ -1.57
BRCA1-230ENST00000634433 TRAV26-2A0A0B4J265 109 aa5.27□□□□□ -1.57
BRCA1-230ENST00000634433 LINC01549A6NIU2 74 aa5.27□□□□□ -1.57
BRCA1-230ENST00000634433 KNCNA6PVL3 124 aa5.27□□□□□ -1.57
BRCA1-230ENST00000634433 IGLL1P15814 213 aa5.27□□□□□ -1.57
BRCA1-230ENST00000634433 SUMO2P61956 95 aaKnown RBP5.27□□□□□ -1.57
BRCA1-230ENST00000634433 Q6ZN92 141 aa5.27□□□□□ -1.57
BRCA1-230ENST00000634433 SMIM2Q9BVW6 85 aa5.27□□□□□ -1.57
BRCA1-230ENST00000634433 MAP6D1Q9H9H5 199 aa5.27□□□□□ -1.57
BRCA1-230ENST00000634433 EIF4EBP3O60516 100 aaPredicted RBP5.27□□□□□ -1.57
BRCA1-230ENST00000634433 GAS8-AS1O95177 125 aa5.27□□□□□ -1.57
BRCA1-230ENST00000634433 HNRNPA3P51991 378 aaKnown RBP5.27□□□□□ -1.57
BRCA1-230ENST00000634433 PRO0628Q9UI54 55 aa5.27□□□□□ -1.57
BRCA1-230ENST00000634433 NUDT3O95989 172 aa5.26□□□□□ -1.57
BRCA1-230ENST00000634433 OCIAD2Q56VL3 154 aa5.26□□□□□ -1.57
BRCA1-230ENST00000634433 PMCHL2Q9BQD1 86 aa5.26□□□□□ -1.57
BRCA1-230ENST00000634433 LINC00467Q9BRT7 94 aa5.26□□□□□ -1.57
BRCA1-230ENST00000634433 MRPS16Q9Y3D3 137 aaKnown RBP5.26□□□□□ -1.57
BRCA1-230ENST00000634433 KIF25-AS1Q9Y6Z4 181 aa5.26□□□□□ -1.57
BRCA1-230ENST00000634433 NSD1Q96L73 2696 aaPredicted RBP5.26□□□□□ -1.57
BRCA1-230ENST00000634433 ANK3Q12955 4377 aaKnown RBP5.26□□□□□ -1.57
BRCA1-230ENST00000634433 A0A087WX48 190 aa5.26□□□□□ -1.57
BRCA1-230ENST00000634433 PRSS1P07477 247 aa5.26□□□□□ -1.57
BRCA1-230ENST00000634433 GAGE5Q13069 117 aa5.26□□□□□ -1.57
BRCA1-230ENST00000634433 GAGE6Q13070 117 aa5.26□□□□□ -1.57
BRCA1-230ENST00000634433 PIK3CD-AS1Q5SR53 167 aa5.26□□□□□ -1.57
BRCA1-230ENST00000634433 ZNF256Q9Y2P7 627 aaPredicted RBP5.26□□□□□ -1.57
BRCA1-230ENST00000634433 FAM236DA0A1B0GTK5 79 aa5.25□□□□□ -1.57
BRCA1-230ENST00000634433 FAM236CP0DP71 79 aa5.25□□□□□ -1.57
BRCA1-230ENST00000634433 FXYD7P58549 80 aa5.25□□□□□ -1.57
BRCA1-230ENST00000634433 SLC25A34Q6PIV7 304 aa5.25□□□□□ -1.57
BRCA1-230ENST00000634433 NAA38Q9BRA0 125 aaKnown RBP5.25□□□□□ -1.57
BRCA1-230ENST00000634433 MDFICQ9P1T7 246 aa5.25□□□□□ -1.57
BRCA1-230ENST00000634433 TP53TG1Q9Y2A0 90 aa5.25□□□□□ -1.57
BRCA1-230ENST00000634433 FN1P02751 2386 aaKnown RBP5.25□□□□□ -1.57
BRCA1-230ENST00000634433 hDV102S1A0JD36 115 aa5.25□□□□□ -1.57
BRCA1-230ENST00000634433 CCL25O15444 150 aa5.25□□□□□ -1.57
BRCA1-230ENST00000634433 INSP01308 110 aa5.25□□□□□ -1.57
BRCA1-230ENST00000634433 PROK1P58294 105 aa5.25□□□□□ -1.57
BRCA1-230ENST00000634433 LINC00315P59091 139 aa5.25□□□□□ -1.57
BRCA1-230ENST00000634433 CD164Q04900 197 aa5.25□□□□□ -1.57
BRCA1-230ENST00000634433 LCE2DQ5TA82 110 aaPredicted RBP5.25□□□□□ -1.57
BRCA1-230ENST00000634433 SNHG12Q9BXW3 62 aa5.25□□□□□ -1.57
BRCA1-230ENST00000634433 FAM30AQ9NZY2 134 aa5.25□□□□□ -1.57
BRCA1-230ENST00000634433 ACANP16112 2415 aa5.24□□□□□ -1.57
BRCA1-230ENST00000634433 HIVEP2P31629 2446 aa5.24□□□□□ -1.57
BRCA1-230ENST00000634433 TRBV6-5A0A0K0K1A5 114 aa5.24□□□□□ -1.57
BRCA1-230ENST00000634433 INAFM1C9JVW0 142 aa5.24□□□□□ -1.57
BRCA1-230ENST00000634433 ZNF876PQ49A33 203 aa5.24□□□□□ -1.57
BRCA1-230ENST00000634433 C2orf48Q96LS8 159 aa5.24□□□□□ -1.57
BRCA1-230ENST00000634433 SMR3AQ99954 134 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms