RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 BOD1L2Q8IYS8 172 aa4.04□□□□□ -1.76
NEK3-211ENST00000629912 STPG4Q8N801 248 aa4.04□□□□□ -1.76
NEK3-211ENST00000629912 LINC00482Q8N8I6 264 aa4.04□□□□□ -1.76
NEK3-211ENST00000629912 NEXN-AS1Q8NBZ9 246 aa4.04□□□□□ -1.76
NEK3-211ENST00000629912 TMEM141Q96I45 108 aa4.04□□□□□ -1.76
NEK3-211ENST00000629912 DNAJC30Q96LL9 226 aa4.04□□□□□ -1.76
NEK3-211ENST00000629912 KIR2DL4Q99706 377 aa4.04□□□□□ -1.76
NEK3-211ENST00000629912 XCL2Q9UBD3 114 aa4.04□□□□□ -1.76
NEK3-211ENST00000629912 CYSLTR1Q9Y271 337 aa4.04□□□□□ -1.76
NEK3-211ENST00000629912 HECTD1Q9ULT8 2610 aa4.03□□□□□ -1.76
NEK3-211ENST00000629912 A0A1B0GV90 55 aa4.03□□□□□ -1.76
NEK3-211ENST00000629912 PRSS29PA6NIE9 313 aa4.03□□□□□ -1.76
NEK3-211ENST00000629912 F8VRH5 84 aa4.03□□□□□ -1.76
NEK3-211ENST00000629912 I3L3M4 83 aa4.03□□□□□ -1.76
NEK3-211ENST00000629912 CIDEAO60543 219 aa4.03□□□□□ -1.76
NEK3-211ENST00000629912 IGHV3-53P01767 116 aa4.03□□□□□ -1.76
NEK3-211ENST00000629912 GIG44P09565 113 aaPredicted RBP4.03□□□□□ -1.76
NEK3-211ENST00000629912 HTN1P15515 57 aa4.03□□□□□ -1.76
NEK3-211ENST00000629912 AZU1P20160 251 aa4.03□□□□□ -1.76
NEK3-211ENST00000629912 PLNP26678 52 aa4.03□□□□□ -1.76
NEK3-211ENST00000629912 ZNF56Q15929 161 aa4.03□□□□□ -1.76
NEK3-211ENST00000629912 FAM74A4Q5TZK3 123 aa4.03□□□□□ -1.76
NEK3-211ENST00000629912 CFAP126Q5VTH2 177 aa4.03□□□□□ -1.76
NEK3-211ENST00000629912 IL17DQ8TAD2 202 aa4.03□□□□□ -1.76
NEK3-211ENST00000629912 BAALCQ8WXS3 180 aa4.03□□□□□ -1.76
NEK3-211ENST00000629912 TIMM17AQ99595 171 aa4.03□□□□□ -1.76
NEK3-211ENST00000629912 C1QTNF4Q9BXJ3 329 aa4.03□□□□□ -1.76
NEK3-211ENST00000629912 MRPL35Q9NZE8 188 aaKnown RBP4.03□□□□□ -1.76
NEK3-211ENST00000629912 CHTOPQ9Y3Y2 248 aaKnown RBP4.03□□□□□ -1.76
NEK3-211ENST00000629912 SETXQ7Z333 2677 aaKnown RBP4.02□□□□□ -1.77
NEK3-211ENST00000629912 TSHBP01222 138 aa4.02□□□□□ -1.77
NEK3-211ENST00000629912 PRM2P04554 102 aa4.02□□□□□ -1.77
NEK3-211ENST00000629912 NPSP0C0P6 89 aa4.02□□□□□ -1.77
NEK3-211ENST00000629912 P0DMU3 169 aa4.02□□□□□ -1.77
NEK3-211ENST00000629912 FAM231AP0DMU4 169 aa4.02□□□□□ -1.77
NEK3-211ENST00000629912 FAM231CP0DMU5 169 aa4.02□□□□□ -1.77
NEK3-211ENST00000629912 CRYBA4P53673 196 aa4.02□□□□□ -1.77
NEK3-211ENST00000629912 DAZ2Q13117 558 aaKnown RBP4.02□□□□□ -1.77
NEK3-211ENST00000629912 PMVKQ15126 192 aa4.02□□□□□ -1.77
NEK3-211ENST00000629912 PAPPA-AS1Q5QFB9 102 aa4.02□□□□□ -1.77
NEK3-211ENST00000629912 C12orf54Q6X4T0 127 aa4.02□□□□□ -1.77
NEK3-211ENST00000629912 Q6ZSN1 163 aa4.02□□□□□ -1.77
NEK3-211ENST00000629912 C2orf91Q6ZV80 131 aa4.02□□□□□ -1.77
NEK3-211ENST00000629912 C20orf203Q8NBC4 194 aa4.02□□□□□ -1.77
NEK3-211ENST00000629912 CSNK1G2-AS1Q8NCQ2 148 aa4.02□□□□□ -1.77
NEK3-211ENST00000629912 RNASE8Q8TDE3 154 aaKnown RBP4.02□□□□□ -1.77
NEK3-211ENST00000629912 TMEM263Q8WUH6 116 aaKnown RBP4.02□□□□□ -1.77
NEK3-211ENST00000629912 OVOL2Q9BRP0 275 aa4.02□□□□□ -1.77
NEK3-211ENST00000629912 TMEM208Q9BTX3 173 aa4.02□□□□□ -1.77
NEK3-211ENST00000629912 HIGD1BQ9P298 99 aa4.02□□□□□ -1.77
NEK3-211ENST00000629912 PYGO1Q9Y3Y4 419 aa4.02□□□□□ -1.77
NEK3-211ENST00000629912 CUBNO60494 3623 aa4.02□□□□□ -1.77
NEK3-211ENST00000629912 OTOGQ6ZRI0 2925 aa4.01□□□□□ -1.77
NEK3-211ENST00000629912 SETD2Q9BYW2 2564 aaPredicted RBP4.01□□□□□ -1.77
NEK3-211ENST00000629912 PF4P02776 101 aa4.01□□□□□ -1.77
NEK3-211ENST00000629912 HINT1P49773 126 aaPredicted RBP4.01□□□□□ -1.77
NEK3-211ENST00000629912 MPV17L2Q567V2 206 aa4.01□□□□□ -1.77
NEK3-211ENST00000629912 BVES-AS1Q5T3Y7 98 aa4.01□□□□□ -1.77
NEK3-211ENST00000629912 C9orf66Q5T8R8 295 aa4.01□□□□□ -1.77
NEK3-211ENST00000629912 ZC2HC1BQ5TFG8 222 aa4.01□□□□□ -1.77
NEK3-211ENST00000629912 NEGR1Q7Z3B1 354 aa4.01□□□□□ -1.77
NEK3-211ENST00000629912 WFDC9Q8NEX5 89 aa4.01□□□□□ -1.77
NEK3-211ENST00000629912 CITED1Q99966 193 aa4.01□□□□□ -1.77
NEK3-211ENST00000629912 CST9LQ9H4G1 147 aa4.01□□□□□ -1.77
NEK3-211ENST00000629912 TP53TG1Q9Y2A0 90 aa4.01□□□□□ -1.77
NEK3-211ENST00000629912 TNFRSF18Q9Y5U5 241 aa4.01□□□□□ -1.77
NEK3-211ENST00000629912 NOTCH2Q04721 2471 aa4□□□□□ -1.77
NEK3-211ENST00000629912 IGKV2D-26A0A0A0MRZ7 120 aa4□□□□□ -1.77
NEK3-211ENST00000629912 TRAV4A0A0B4J268 109 aa4□□□□□ -1.77
NEK3-211ENST00000629912 TRBV10-1A0A0K0K1A3 114 aa4□□□□□ -1.77
NEK3-211ENST00000629912 RPL39P62891 51 aaKnown RBP4□□□□□ -1.77
NEK3-211ENST00000629912 BATFQ16520 125 aa4□□□□□ -1.77
NEK3-211ENST00000629912 TMEM97Q5BJF2 176 aa4□□□□□ -1.77
NEK3-211ENST00000629912 GTSCR1Q86UQ5 136 aa4□□□□□ -1.77
NEK3-211ENST00000629912 PCP2Q8IVA1 136 aa4□□□□□ -1.77
NEK3-211ENST00000629912 OR4C5Q8NGB2 326 aa4□□□□□ -1.77
NEK3-211ENST00000629912 C16orf74Q96GX8 76 aa4□□□□□ -1.77
NEK3-211ENST00000629912 MRPL16Q9NX20 251 aaKnown RBP4□□□□□ -1.77
NEK3-211ENST00000629912 HIVEP1P15822 2718 aa4□□□□□ -1.77
NEK3-211ENST00000629912 NSD1Q96L73 2696 aaPredicted RBP3.99□□□□□ -1.77
NEK3-211ENST00000629912 FN1P02751 2386 aaKnown RBP3.99□□□□□ -1.77
NEK3-211ENST00000629912 C2CD3Q4AC94 2353 aa3.99□□□□□ -1.77
NEK3-211ENST00000629912 IGLV4-69A0A075B6H9 119 aa3.99□□□□□ -1.77
NEK3-211ENST00000629912 IGHV3OR16-12A0A075B7B8 117 aa3.99□□□□□ -1.77
NEK3-211ENST00000629912 IGHV3-73A0A0B4J1V6 119 aa3.99□□□□□ -1.77
NEK3-211ENST00000629912 PLAC8L1A1L4L8 177 aa3.99□□□□□ -1.77
NEK3-211ENST00000629912 SMIM9A6NGZ8 99 aa3.99□□□□□ -1.77
NEK3-211ENST00000629912 E9PLD3 99 aa3.99□□□□□ -1.77
NEK3-211ENST00000629912 RPL35AP18077 110 aaKnown RBP3.99□□□□□ -1.77
NEK3-211ENST00000629912 NMUP48645 174 aa3.99□□□□□ -1.77
NEK3-211ENST00000629912 SEC11AP67812 179 aa3.99□□□□□ -1.77
NEK3-211ENST00000629912 HSD52Q0P140 79 aa3.99□□□□□ -1.77
NEK3-211ENST00000629912 GAGE1Q13065 139 aa3.99□□□□□ -1.77
NEK3-211ENST00000629912 RRN3P1Q2M238 152 aa3.99□□□□□ -1.77
NEK3-211ENST00000629912 NFE4Q86UQ8 179 aa3.99□□□□□ -1.77
NEK3-211ENST00000629912 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.99□□□□□ -1.77
NEK3-211ENST00000629912 ORAOV1Q8WV07 137 aa3.99□□□□□ -1.77
NEK3-211ENST00000629912 AMELXQ99217 191 aa3.99□□□□□ -1.77
NEK3-211ENST00000629912 TIMM21Q9BVV7 248 aa3.99□□□□□ -1.77
NEK3-211ENST00000629912 ZMAT5Q9UDW3 170 aaKnown RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms