RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 A0A087WWC5 75 aa10.17□□□□□ -0.78
PNKP-221ENST00000627317 SNAPINO95295 136 aa10.17□□□□□ -0.78
PNKP-221ENST00000627317 CAMPP49913 170 aa10.17□□□□□ -0.78
PNKP-221ENST00000627317 HBBP68871 147 aa10.17□□□□□ -0.78
PNKP-221ENST00000627317 KCNIP4Q6PIL6 250 aa10.17□□□□□ -0.78
PNKP-221ENST00000627317 ATP5L2Q7Z4Y8 100 aa10.17□□□□□ -0.78
PNKP-221ENST00000627317 FAT2Q9NYQ8 4349 aa10.16□□□□□ -0.78
PNKP-221ENST00000627317 S100PP25815 95 aa10.16□□□□□ -0.78
PNKP-221ENST00000627317 ESRGQ1W209 222 aa10.16□□□□□ -0.78
PNKP-221ENST00000627317 ATP6V0E2Q8NHE4 81 aa10.16□□□□□ -0.78
PNKP-221ENST00000627317 IMMP2LQ96T52 175 aa10.16□□□□□ -0.78
PNKP-221ENST00000627317 Q9UF83 564 aa10.16□□□□□ -0.78
PNKP-221ENST00000627317 TRBV7-3A0A075B6L6 115 aa10.15□□□□□ -0.78
PNKP-221ENST00000627317 A0A1B0GXF2 115 aa10.15□□□□□ -0.78
PNKP-221ENST00000627317 M0QY20 66 aa10.15□□□□□ -0.78
PNKP-221ENST00000627317 LINC00694P0DN24 101 aa10.15□□□□□ -0.78
PNKP-221ENST00000627317 RASL11AQ6T310 242 aa10.15□□□□□ -0.78
PNKP-221ENST00000627317 NEXN-AS1Q8NBZ9 246 aa10.15□□□□□ -0.78
PNKP-221ENST00000627317 ZNRF2Q8NHG8 242 aa10.15□□□□□ -0.78
PNKP-221ENST00000627317 BTF3L4Q96K17 158 aa10.15□□□□□ -0.78
PNKP-221ENST00000627317 TMEM242Q9NWH2 141 aa10.15□□□□□ -0.78
PNKP-221ENST00000627317 LINC00588Q9Y4M8 146 aa10.15□□□□□ -0.78
PNKP-221ENST00000627317 TRAV26-2A0A0B4J265 109 aa10.14□□□□□ -0.79
PNKP-221ENST00000627317 LYPD5Q6UWN5 251 aa10.14□□□□□ -0.79
PNKP-221ENST00000627317 AMN1Q8IY45 258 aa10.14□□□□□ -0.79
PNKP-221ENST00000627317 MRPS16Q9Y3D3 137 aaKnown RBP10.14□□□□□ -0.79
PNKP-221ENST00000627317 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.13□□□□□ -0.79
PNKP-221ENST00000627317 GATD1Q8NB37 220 aa10.13□□□□□ -0.79
PNKP-221ENST00000627317 DNAJC30Q96LL9 226 aa10.13□□□□□ -0.79
PNKP-221ENST00000627317 GTSF1LQ9H1H1 148 aa10.13□□□□□ -0.79
PNKP-221ENST00000627317 TNFRSF18Q9Y5U5 241 aa10.13□□□□□ -0.79
PNKP-221ENST00000627317 URGCP-MRPS24S4R325 110 aa10.13□□□□□ -0.79
PNKP-221ENST00000627317 DNAH17Q9UFH2 4485 aa10.12□□□□□ -0.79
PNKP-221ENST00000627317 TRAV9-1A0A075B6T8 112 aa10.12□□□□□ -0.79
PNKP-221ENST00000627317 RAB4AP20338 218 aa10.12□□□□□ -0.79
PNKP-221ENST00000627317 TIRAPP58753 221 aa10.12□□□□□ -0.79
PNKP-221ENST00000627317 UBE2D3P61077 147 aa10.12□□□□□ -0.79
PNKP-221ENST00000627317 UBE2D2P62837 147 aa10.12□□□□□ -0.79
PNKP-221ENST00000627317 FRZBQ92765 325 aa10.12□□□□□ -0.79
PNKP-221ENST00000627317 MRAP2Q96G30 205 aa10.12□□□□□ -0.79
PNKP-221ENST00000627317 RNF185Q96GF1 192 aa10.12□□□□□ -0.79
PNKP-221ENST00000627317 NIT2Q9NQR4 276 aa10.12□□□□□ -0.79
PNKP-221ENST00000627317 FAM104BQ5XKR9 115 aa10.11□□□□□ -0.79
PNKP-221ENST00000627317 Q6ZR54 194 aa10.11□□□□□ -0.79
PNKP-221ENST00000627317 UPK3BQ9BT76 320 aa10.11□□□□□ -0.79
PNKP-221ENST00000627317 MRPL51Q4U2R6 128 aaKnown RBP10.1□□□□□ -0.79
PNKP-221ENST00000627317 OR10J3Q5JRS4 329 aa10.1□□□□□ -0.79
PNKP-221ENST00000627317 RPL39LQ96EH5 51 aaKnown RBP10.1□□□□□ -0.79
PNKP-221ENST00000627317 TRAV8-6A0A0B4J262 113 aa10.09□□□□□ -0.79
PNKP-221ENST00000627317 IGHV3-38A0A0C4DH36 116 aa10.09□□□□□ -0.79
PNKP-221ENST00000627317 NCR2O95944 276 aa10.09□□□□□ -0.79
PNKP-221ENST00000627317 LELP1Q5T871 98 aa10.09□□□□□ -0.79
PNKP-221ENST00000627317 DAZ4Q86SG3 579 aaKnown RBP10.09□□□□□ -0.79
PNKP-221ENST00000627317 DAZ3Q9NR90 486 aaKnown RBP10.09□□□□□ -0.79
PNKP-221ENST00000627317 IGLV2-18A0A075B6J9 118 aa10.08□□□□□ -0.8
PNKP-221ENST00000627317 SMKR1H3BMG3 65 aa10.08□□□□□ -0.8
PNKP-221ENST00000627317 PKHD1P08F94 4074 aa10.07□□□□□ -0.8
PNKP-221ENST00000627317 SIVA1O15304 175 aa10.07□□□□□ -0.8
PNKP-221ENST00000627317 GAS8-AS1O95177 125 aa10.07□□□□□ -0.8
PNKP-221ENST00000627317 PPP1R17O96001 155 aa10.07□□□□□ -0.8
PNKP-221ENST00000627317 CKS2P33552 79 aa10.07□□□□□ -0.8
PNKP-221ENST00000627317 TMEM97Q5BJF2 176 aa10.07□□□□□ -0.8
PNKP-221ENST00000627317 ATRAIDQ6UW56 229 aa10.07□□□□□ -0.8
PNKP-221ENST00000627317 WFDC10BQ8IUB3 73 aa10.07□□□□□ -0.8
PNKP-221ENST00000627317 Q9H8V8 135 aa10.07□□□□□ -0.8
PNKP-221ENST00000627317 RTL8CO15255 209 aa10.06□□□□□ -0.8
PNKP-221ENST00000627317 RPS10P46783 165 aaKnown RBP10.06□□□□□ -0.8
PNKP-221ENST00000627317 ST20Q9HBF5 79 aa10.06□□□□□ -0.8
PNKP-221ENST00000627317 PKD1P98161 4303 aa10.05□□□□□ -0.8
PNKP-221ENST00000627317 TRBV6-8A0A0A6YYG3 113 aa10.05□□□□□ -0.8
PNKP-221ENST00000627317 TRBV6-5A0A0K0K1A5 114 aa10.05□□□□□ -0.8
PNKP-221ENST00000627317 SDHAF1A6NFY7 115 aa10.05□□□□□ -0.8
PNKP-221ENST00000627317 D6R8Y8 96 aa10.05□□□□□ -0.8
PNKP-221ENST00000627317 PPBPP02775 128 aa10.05□□□□□ -0.8
PNKP-221ENST00000627317 TTC32Q5I0X7 151 aa10.05□□□□□ -0.8
PNKP-221ENST00000627317 TMEM136Q6ZRR5 245 aa10.05□□□□□ -0.8
PNKP-221ENST00000627317 A0A1B0GVY2 172 aa10.04□□□□□ -0.8
PNKP-221ENST00000627317 M0R2N4 97 aa10.04□□□□□ -0.8
PNKP-221ENST00000627317 HLA-DQA1P01909 254 aa10.04□□□□□ -0.8
PNKP-221ENST00000627317 COTL1Q14019 142 aa10.04□□□□□ -0.8
PNKP-221ENST00000627317 COX19Q49B96 90 aa10.04□□□□□ -0.8
PNKP-221ENST00000627317 LINC00336Q6ZUF6 198 aa10.04□□□□□ -0.8
PNKP-221ENST00000627317 ORMDL3Q8N138 153 aa10.04□□□□□ -0.8
PNKP-221ENST00000627317 NRACQ8N912 160 aa10.04□□□□□ -0.8
PNKP-221ENST00000627317 TRBV25-1A0A075B6N4 114 aa10.03□□□□□ -0.8
PNKP-221ENST00000627317 IGHV1-24A0A0C4DH33 117 aa10.03□□□□□ -0.8
PNKP-221ENST00000627317 NBDYA0A0U1RRE5 68 aa10.03□□□□□ -0.8
PNKP-221ENST00000627317 ELOBQ15370 118 aa10.03□□□□□ -0.8
PNKP-221ENST00000627317 TMEM70Q9BUB7 260 aa10.03□□□□□ -0.8
PNKP-221ENST00000627317 SMCO4Q9NRQ5 59 aa10.03□□□□□ -0.8
PNKP-221ENST00000627317 HERC2O95714 4834 aa10.02□□□□□ -0.8
PNKP-221ENST00000627317 TGIF2-C20orf24A0A0A6YYL0 155 aa10.02□□□□□ -0.81
PNKP-221ENST00000627317 TNFRSF6BO95407 300 aa10.02□□□□□ -0.81
PNKP-221ENST00000627317 APCSP02743 223 aa10.02□□□□□ -0.81
PNKP-221ENST00000627317 MT-ND6P03923 174 aa10.02□□□□□ -0.81
PNKP-221ENST00000627317 DNAH10OSP0CZ25 163 aa10.02□□□□□ -0.81
PNKP-221ENST00000627317 PMCHP20382 165 aa10.02□□□□□ -0.81
PNKP-221ENST00000627317 SUMO2P61956 95 aaKnown RBP10.02□□□□□ -0.81
PNKP-221ENST00000627317 NTM-AS1Q6ZSK4 140 aa10.02□□□□□ -0.81
PNKP-221ENST00000627317 CBLN2Q8IUK8 224 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms