RNA–Protein interactions for RNA: ENST00000625151.1

LINC00552-201, long intergenic non-protein coding RNA 552, humanhuman

BASIC

Gene LINC00552, Length 2,579 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00552-201ENST00000625151 PLA2G2AP14555 144 aa11.29□□□□□ -0.6
LINC00552-201ENST00000625151 INSL3P51460 131 aa11.29□□□□□ -0.6
LINC00552-201ENST00000625151 HIST2H2BCQ6DN03 193 aa11.29□□□□□ -0.6
LINC00552-201ENST00000625151 DOPEY2Q9Y3R5 2298 aa11.29□□□□□ -0.6
LINC00552-201ENST00000625151 TMEM170BQ5T4T1 132 aa11.28□□□□□ -0.6
LINC00552-201ENST00000625151 Q8N1Y9 231 aa11.28□□□□□ -0.6
LINC00552-201ENST00000625151 A0A0J9YX75 114 aa11.28□□□□□ -0.6
LINC00552-201ENST00000625151 TRBV6-5A0A0K0K1A5 114 aa11.28□□□□□ -0.6
LINC00552-201ENST00000625151 APOMO95445 188 aa11.28□□□□□ -0.6
LINC00552-201ENST00000625151 ZNF56Q15929 161 aa11.28□□□□□ -0.6
LINC00552-201ENST00000625151 ZNF876PQ49A33 203 aa11.28□□□□□ -0.6
LINC00552-201ENST00000625151 APCP25054 2843 aa11.28□□□□□ -0.6
LINC00552-201ENST00000625151 OPRPNQ99935 248 aaPredicted RBP11.27□□□□□ -0.6
LINC00552-201ENST00000625151 ZNF469Q96JG9 3925 aaPredicted RBP11.27□□□□□ -0.61
LINC00552-201ENST00000625151 M0QY20 66 aa11.27□□□□□ -0.61
LINC00552-201ENST00000625151 IGHV4-59P01825 116 aa11.26□□□□□ -0.61
LINC00552-201ENST00000625151 LOC107984156A0A0G2JMH3 177 aa11.26□□□□□ -0.61
LINC00552-201ENST00000625151 SMCPP49901 116 aaPredicted RBP11.26□□□□□ -0.61
LINC00552-201ENST00000625151 SPINK13Q1W4C9 94 aa11.26□□□□□ -0.61
LINC00552-201ENST00000625151 ARL17AQ8IVW1 177 aa11.26□□□□□ -0.61
LINC00552-201ENST00000625151 DLX4Q92988 240 aaPredicted RBP11.26□□□□□ -0.61
LINC00552-201ENST00000625151 ODF3Q96PU9 254 aa11.26□□□□□ -0.61
LINC00552-201ENST00000625151 AMELXQ99217 191 aa11.26□□□□□ -0.61
LINC00552-201ENST00000625151 CFAP126Q5VTH2 177 aa11.25□□□□□ -0.61
LINC00552-201ENST00000625151 NDUFA11Q86Y39 141 aa11.25□□□□□ -0.61
LINC00552-201ENST00000625151 GCN1Q92616 2671 aaKnown RBP11.25□□□□□ -0.61
LINC00552-201ENST00000625151 K7EQG2 157 aa11.25□□□□□ -0.61
LINC00552-201ENST00000625151 IGHV3-30P01768 117 aa11.25□□□□□ -0.61
LINC00552-201ENST00000625151 IGHV3-30-5P0DP03 117 aa11.25□□□□□ -0.61
LINC00552-201ENST00000625151 ZNF580Q9UK33 172 aa11.25□□□□□ -0.61
LINC00552-201ENST00000625151 ANKRD17O75179 2603 aaKnown RBP11.25□□□□□ -0.61
LINC00552-201ENST00000625151 ZANQ9Y493 2812 aa11.25□□□□□ -0.61
LINC00552-201ENST00000625151 PSMB2P49721 201 aa11.24□□□□□ -0.61
LINC00552-201ENST00000625151 UBE2D3P61077 147 aa11.24□□□□□ -0.61
LINC00552-201ENST00000625151 SNRPD3P62318 126 aaKnown RBP11.24□□□□□ -0.61
LINC00552-201ENST00000625151 UBE2D2P62837 147 aa11.24□□□□□ -0.61
LINC00552-201ENST00000625151 SYT8Q8NBV8 401 aa11.24□□□□□ -0.61
LINC00552-201ENST00000625151 IGHV1OR15-1A0A075B7D0 117 aa11.24□□□□□ -0.61
LINC00552-201ENST00000625151 B4DSR2 109 aa11.24□□□□□ -0.61
LINC00552-201ENST00000625151 J3QQQ9 107 aa11.24□□□□□ -0.61
LINC00552-201ENST00000625151 P0DMU3 169 aa11.24□□□□□ -0.61
LINC00552-201ENST00000625151 FAM231AP0DMU4 169 aa11.24□□□□□ -0.61
LINC00552-201ENST00000625151 FAM231CP0DMU5 169 aa11.24□□□□□ -0.61
LINC00552-201ENST00000625151 DEFB112Q30KQ8 113 aa11.24□□□□□ -0.61
LINC00552-201ENST00000625151 NSUN5P1Q3KNT7 163 aa11.24□□□□□ -0.61
LINC00552-201ENST00000625151 SLC25A29Q8N8R3 303 aa11.24□□□□□ -0.61
LINC00552-201ENST00000625151 ZNF418Q8TF45 676 aaPredicted RBP11.24□□□□□ -0.61
LINC00552-201ENST00000625151 CFC1BP0CG36 223 aa11.23□□□□□ -0.61
LINC00552-201ENST00000625151 CFC1P0CG37 223 aa11.23□□□□□ -0.61
LINC00552-201ENST00000625151 J3QKU1 62 aa11.23□□□□□ -0.61
LINC00552-201ENST00000625151 SYNJ2BPP57105 145 aa11.23□□□□□ -0.61
LINC00552-201ENST00000625151 TRPT1Q86TN4 253 aaKnown RBP11.23□□□□□ -0.61
LINC00552-201ENST00000625151 NFE4Q86UQ8 179 aa11.23□□□□□ -0.61
LINC00552-201ENST00000625151 RHOHQ15669 191 aa11.22□□□□□ -0.61
LINC00552-201ENST00000625151 DUX5Q96PT3 197 aa11.22□□□□□ -0.61
LINC00552-201ENST00000625151 LGALS3P17931 250 aaKnown RBP11.21□□□□□ -0.61
LINC00552-201ENST00000625151 HERV-K104P63124 156 aa11.21□□□□□ -0.61
LINC00552-201ENST00000625151 C20orf203Q8NBC4 194 aa11.21□□□□□ -0.61
LINC00552-201ENST00000625151 C1QTNF4Q9BXJ3 329 aa11.21□□□□□ -0.61
LINC00552-201ENST00000625151 TMEM223A0PJW6 202 aa11.21□□□□□ -0.62
LINC00552-201ENST00000625151 FOXI1Q12951 378 aa11.21□□□□□ -0.62
LINC00552-201ENST00000625151 SS18L2Q9UHA2 77 aa11.21□□□□□ -0.62
LINC00552-201ENST00000625151 ERG28Q9UKR5 140 aa11.2□□□□□ -0.62
LINC00552-201ENST00000625151 IGHV3-64A0A075B6Q5 118 aa11.2□□□□□ -0.62
LINC00552-201ENST00000625151 TCL1BO95988 128 aa11.2□□□□□ -0.62
LINC00552-201ENST00000625151 C10orf126Q8N4M7 172 aa11.2□□□□□ -0.62
LINC00552-201ENST00000625151 I3L3M4 83 aa11.19□□□□□ -0.62
LINC00552-201ENST00000625151 RBMY1A1P0DJD3 496 aaKnown RBP11.19□□□□□ -0.62
LINC00552-201ENST00000625151 RBMY1CP0DJD4 496 aa11.19□□□□□ -0.62
LINC00552-201ENST00000625151 ZNF22P17026 224 aaPredicted RBP11.19□□□□□ -0.62
LINC00552-201ENST00000625151 RBMY1FQ15415 496 aaKnown RBP11.19□□□□□ -0.62
LINC00552-201ENST00000625151 PTH2Q96A98 100 aa11.19□□□□□ -0.62
LINC00552-201ENST00000625151 TNFRSF18Q9Y5U5 241 aa11.19□□□□□ -0.62
LINC00552-201ENST00000625151 NAV2Q8IVL1 2488 aa11.19□□□□□ -0.62
LINC00552-201ENST00000625151 MXRA5Q9NR99 2828 aa11.19□□□□□ -0.62
LINC00552-201ENST00000625151 LEPROTO15243 131 aa11.19□□□□□ -0.62
LINC00552-201ENST00000625151 GAGE5Q13069 117 aa11.19□□□□□ -0.62
LINC00552-201ENST00000625151 GAGE6Q13070 117 aa11.19□□□□□ -0.62
LINC00552-201ENST00000625151 ATP6V0E2Q8NHE4 81 aa11.19□□□□□ -0.62
LINC00552-201ENST00000625151 IGLV4-3A0A075B6K6 122 aa11.18□□□□□ -0.62
LINC00552-201ENST00000625151 A0A0J9YXV3 536 aa11.18□□□□□ -0.62
LINC00552-201ENST00000625151 NACAE9PAV3 2078 aa11.18□□□□□ -0.62
LINC00552-201ENST00000625151 TMEM89A2RUT3 159 aa11.18□□□□□ -0.62
LINC00552-201ENST00000625151 RHODO00212 210 aa11.18□□□□□ -0.62
LINC00552-201ENST00000625151 EIF4EBP3O60516 100 aaPredicted RBP11.18□□□□□ -0.62
LINC00552-201ENST00000625151 TGFAP01135 160 aa11.18□□□□□ -0.62
LINC00552-201ENST00000625151 CREBBPQ92793 2442 aa11.17□□□□□ -0.62
LINC00552-201ENST00000625151 IGHV3-73A0A0B4J1V6 119 aa11.17□□□□□ -0.62
LINC00552-201ENST00000625151 GATA3P23771 443 aa11.17□□□□□ -0.62
LINC00552-201ENST00000625151 LYRM7Q5U5X0 104 aa11.17□□□□□ -0.62
LINC00552-201ENST00000625151 PRO1854Q9UHT4 67 aa11.17□□□□□ -0.62
LINC00552-201ENST00000625151 AKAP9Q99996 3911 aa11.17□□□□□ -0.62
LINC00552-201ENST00000625151 HTN1P15515 57 aa11.17□□□□□ -0.62
LINC00552-201ENST00000625151 HOXD3P31249 432 aaPredicted RBP11.17□□□□□ -0.62
LINC00552-201ENST00000625151 TRGV11A0A075B6L2 103 aa11.16□□□□□ -0.62
LINC00552-201ENST00000625151 A4D1N5 150 aa11.16□□□□□ -0.62
LINC00552-201ENST00000625151 PROK1P58294 105 aa11.16□□□□□ -0.62
LINC00552-201ENST00000625151 MAPK1IP1LQ8NDC0 245 aa11.16□□□□□ -0.62
LINC00552-201ENST00000625151 ITPR2Q14571 2701 aa11.16□□□□□ -0.62
LINC00552-201ENST00000625151 VCX2Q9H322 139 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms