RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 NEXN-AS1Q8NBZ9 246 aa14.43□□□□□ -0.1
PCDHB11-202ENST00000624887 LINC00467Q9BRT7 94 aa14.43□□□□□ -0.1
PCDHB11-202ENST00000624887 MTORP42345 2549 aa14.43□□□□□ -0.1
PCDHB11-202ENST00000624887 LINC01549A6NIU2 74 aa14.43□□□□□ -0.1
PCDHB11-202ENST00000624887 H7C1H1 209 aa14.43□□□□□ -0.1
PCDHB11-202ENST00000624887 PLNP26678 52 aa14.43□□□□□ -0.1
PCDHB11-202ENST00000624887 ZC2HC1BQ5TFG8 222 aa14.43□□□□□ -0.1
PCDHB11-202ENST00000624887 ZFP2Q6ZN57 461 aa14.43□□□□□ -0.1
PCDHB11-202ENST00000624887 F8VRH5 84 aa14.42□□□□□ -0.1
PCDHB11-202ENST00000624887 TRPT1Q86TN4 253 aaKnown RBP14.42□□□□□ -0.1
PCDHB11-202ENST00000624887 CYSLTR1Q9Y271 337 aa14.42□□□□□ -0.1
PCDHB11-202ENST00000624887 NOTCH2Q04721 2471 aa14.42□□□□□ -0.1
PCDHB11-202ENST00000624887 IGKV2D-26A0A0A0MRZ7 120 aa14.42□□□□□ -0.1
PCDHB11-202ENST00000624887 NDUFA7O95182 113 aa14.42□□□□□ -0.1
PCDHB11-202ENST00000624887 PIK3CD-AS1Q5SR53 167 aa14.42□□□□□ -0.1
PCDHB11-202ENST00000624887 INSP01308 110 aa14.41□□□□□ -0.1
PCDHB11-202ENST00000624887 ZNF415Q09FC8 603 aa14.41□□□□□ -0.1
PCDHB11-202ENST00000624887 AMMECR1LQ6DCA0 310 aa14.41□□□□□ -0.1
PCDHB11-202ENST00000624887 GTSCR1Q86UQ5 136 aa14.41□□□□□ -0.1
PCDHB11-202ENST00000624887 BAALCQ8WXS3 180 aa14.41□□□□□ -0.1
PCDHB11-202ENST00000624887 JMJD8Q96S16 334 aa14.41□□□□□ -0.1
PCDHB11-202ENST00000624887 WNK1Q9H4A3 2382 aa14.41□□□□□ -0.1
PCDHB11-202ENST00000624887 M0R2P5 195 aa14.4□□□□□ -0.1
PCDHB11-202ENST00000624887 PTH2Q96A98 100 aa14.4□□□□□ -0.1
PCDHB11-202ENST00000624887 PRM2P04554 102 aa14.4□□□□□ -0.1
PCDHB11-202ENST00000624887 RIPPLY3P57055 190 aa14.4□□□□□ -0.1
PCDHB11-202ENST00000624887 LINC01587Q99440 93 aa14.4□□□□□ -0.1
PCDHB11-202ENST00000624887 EDA2RQ9HAV5 297 aa14.4□□□□□ -0.1
PCDHB11-202ENST00000624887 CHTOPQ9Y3Y2 248 aaKnown RBP14.4□□□□□ -0.1
PCDHB11-202ENST00000624887 OR11H12B2RN74 326 aa14.39□□□□□ -0.11
PCDHB11-202ENST00000624887 STHQ8IWL8 128 aa14.39□□□□□ -0.11
PCDHB11-202ENST00000624887 TP53TG1Q9Y2A0 90 aa14.39□□□□□ -0.11
PCDHB11-202ENST00000624887 K7ERU9 68 aa14.38□□□□□ -0.11
PCDHB11-202ENST00000624887 PROK1P58294 105 aa14.38□□□□□ -0.11
PCDHB11-202ENST00000624887 RNF151Q2KHN1 245 aa14.38□□□□□ -0.11
PCDHB11-202ENST00000624887 TMEM97Q5BJF2 176 aa14.38□□□□□ -0.11
PCDHB11-202ENST00000624887 IGIPA6NJ69 53 aa14.38□□□□□ -0.11
PCDHB11-202ENST00000624887 A8MWV9 139 aa14.38□□□□□ -0.11
PCDHB11-202ENST00000624887 C11orf72Q8NBR9 251 aa14.38□□□□□ -0.11
PCDHB11-202ENST00000624887 TRAV8-6A0A0B4J262 113 aa14.37□□□□□ -0.11
PCDHB11-202ENST00000624887 INAFM1C9JVW0 142 aa14.37□□□□□ -0.11
PCDHB11-202ENST00000624887 HIVEP2P31629 2446 aa14.37□□□□□ -0.11
PCDHB11-202ENST00000624887 PRSS29PA6NIE9 313 aa14.36□□□□□ -0.11
PCDHB11-202ENST00000624887 ADARB2-AS1A8MUL3 147 aa14.36□□□□□ -0.11
PCDHB11-202ENST00000624887 UFSP1Q6NVU6 142 aa14.36□□□□□ -0.11
PCDHB11-202ENST00000624887 SETD2Q9BYW2 2564 aaPredicted RBP14.36□□□□□ -0.11
PCDHB11-202ENST00000624887 GAGE12BA1L429 117 aa14.36□□□□□ -0.11
PCDHB11-202ENST00000624887 TSHBP01222 138 aa14.36□□□□□ -0.11
PCDHB11-202ENST00000624887 RHOHQ15669 191 aa14.36□□□□□ -0.11
PCDHB11-202ENST00000624887 DEFB104AQ8WTQ1 72 aa14.36□□□□□ -0.11
PCDHB11-202ENST00000624887 TIMM17AQ99595 171 aa14.36□□□□□ -0.11
PCDHB11-202ENST00000624887 VPS25Q9BRG1 176 aa14.36□□□□□ -0.11
PCDHB11-202ENST00000624887 H3BRM9 83 aa14.35□□□□□ -0.11
PCDHB11-202ENST00000624887 SAP30O75446 220 aa14.35□□□□□ -0.11
PCDHB11-202ENST00000624887 RPL39P62891 51 aaKnown RBP14.35□□□□□ -0.11
PCDHB11-202ENST00000624887 HSD52Q0P140 79 aa14.35□□□□□ -0.11
PCDHB11-202ENST00000624887 NSUN5P1Q3KNT7 163 aa14.35□□□□□ -0.11
PCDHB11-202ENST00000624887 TMEM141Q96I45 108 aa14.35□□□□□ -0.11
PCDHB11-202ENST00000624887 SPXQ9BT56 116 aa14.35□□□□□ -0.11
PCDHB11-202ENST00000624887 XCL2Q9UBD3 114 aa14.35□□□□□ -0.11
PCDHB11-202ENST00000624887 TTTY13Q9BZ97 58 aa14.34□□□□□ -0.11
PCDHB11-202ENST00000624887 I3L3M4 83 aa14.34□□□□□ -0.11
PCDHB11-202ENST00000624887 CMC4P56277 68 aaPredicted RBP14.34□□□□□ -0.11
PCDHB11-202ENST00000624887 HIGD1BQ9P298 99 aa14.34□□□□□ -0.11
PCDHB11-202ENST00000624887 A6NDN8 102 aa14.33□□□□□ -0.12
PCDHB11-202ENST00000624887 GTF2H5Q6ZYL4 71 aa14.33□□□□□ -0.12
PCDHB11-202ENST00000624887 IGHV3-73A0A0B4J1V6 119 aa14.33□□□□□ -0.12
PCDHB11-202ENST00000624887 C9orf118A6NHY6 69 aa14.33□□□□□ -0.12
PCDHB11-202ENST00000624887 IGLV1-51P01701 117 aa14.33□□□□□ -0.12
PCDHB11-202ENST00000624887 BEAN1Q3B7T3 259 aa14.33□□□□□ -0.12
PCDHB11-202ENST00000624887 NACAE9PAV3 2078 aa14.32□□□□□ -0.12
PCDHB11-202ENST00000624887 CFAP126Q5VTH2 177 aa14.32□□□□□ -0.12
PCDHB11-202ENST00000624887 C1orf158Q8N1D5 194 aa14.32□□□□□ -0.12
PCDHB11-202ENST00000624887 PMVKQ15126 192 aa14.31□□□□□ -0.12
PCDHB11-202ENST00000624887 P0DMU3 169 aa14.31□□□□□ -0.12
PCDHB11-202ENST00000624887 FAM231AP0DMU4 169 aa14.31□□□□□ -0.12
PCDHB11-202ENST00000624887 FAM231CP0DMU5 169 aa14.31□□□□□ -0.12
PCDHB11-202ENST00000624887 FAM110AQ9BQ89 295 aa14.31□□□□□ -0.12
PCDHB11-202ENST00000624887 TRBV25-1A0A075B6N4 114 aa14.3□□□□□ -0.12
PCDHB11-202ENST00000624887 GAGE10A6NGK3 116 aa14.3□□□□□ -0.12
PCDHB11-202ENST00000624887 RHODO00212 210 aa14.3□□□□□ -0.12
PCDHB11-202ENST00000624887 AZU1P20160 251 aa14.29□□□□□ -0.12
PCDHB11-202ENST00000624887 MRPL16Q9NX20 251 aaKnown RBP14.29□□□□□ -0.12
PCDHB11-202ENST00000624887 K7EP34 96 aa14.29□□□□□ -0.12
PCDHB11-202ENST00000624887 MAPKAPK5-AS1Q8N8E1 139 aa14.29□□□□□ -0.12
PCDHB11-202ENST00000624887 C20orf203Q8NBC4 194 aa14.29□□□□□ -0.12
PCDHB11-202ENST00000624887 IGLV4-69A0A075B6H9 119 aa14.28□□□□□ -0.12
PCDHB11-202ENST00000624887 PAPPA-AS1Q5QFB9 102 aa14.28□□□□□ -0.12
PCDHB11-202ENST00000624887 CHAC1Q9BUX1 264 aa14.28□□□□□ -0.12
PCDHB11-202ENST00000624887 RS1O15537 224 aa14.27□□□□□ -0.12
PCDHB11-202ENST00000624887 Q6ZSN1 163 aa14.27□□□□□ -0.12
PCDHB11-202ENST00000624887 NDUFA11Q86Y39 141 aa14.27□□□□□ -0.12
PCDHB11-202ENST00000624887 IL17DQ8TAD2 202 aa14.27□□□□□ -0.12
PCDHB11-202ENST00000624887 TNFRSF18Q9Y5U5 241 aa14.27□□□□□ -0.12
PCDHB11-202ENST00000624887 SETXQ7Z333 2677 aaKnown RBP14.27□□□□□ -0.12
PCDHB11-202ENST00000624887 IGHV3OR16-12A0A075B7B8 117 aa14.27□□□□□ -0.13
PCDHB11-202ENST00000624887 E9PLD3 99 aa14.27□□□□□ -0.13
PCDHB11-202ENST00000624887 CRLF1O75462 422 aa14.27□□□□□ -0.13
PCDHB11-202ENST00000624887 KRTAP10-3P60369 221 aa14.27□□□□□ -0.13
PCDHB11-202ENST00000624887 OR11H2Q8NH07 326 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms