RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 MYO9AB2RTY4 2548 aa11.4□□□□□ -0.58
PMS1-221ENST00000624204 H7C423 109 aa11.4□□□□□ -0.58
PMS1-221ENST00000624204 UBE2E1P51965 193 aa11.4□□□□□ -0.58
PMS1-221ENST00000624204 MRPL53Q96EL3 112 aaKnown RBP11.4□□□□□ -0.58
PMS1-221ENST00000624204 TIMM17AQ99595 171 aa11.4□□□□□ -0.58
PMS1-221ENST00000624204 A0A0J9YXV3 536 aa11.4□□□□□ -0.59
PMS1-221ENST00000624204 B9A039 149 aa11.4□□□□□ -0.59
PMS1-221ENST00000624204 LEPROTO15243 131 aa11.4□□□□□ -0.59
PMS1-221ENST00000624204 COX6CP09669 75 aa11.4□□□□□ -0.59
PMS1-221ENST00000624204 FAM236AA0A1B0GUQ0 79 aa11.39□□□□□ -0.59
PMS1-221ENST00000624204 FAM236BA0A1B0GV22 79 aa11.39□□□□□ -0.59
PMS1-221ENST00000624204 VPREB3Q9UKI3 123 aa11.39□□□□□ -0.59
PMS1-221ENST00000624204 MUC4Q99102 2169 aa11.39□□□□□ -0.59
PMS1-221ENST00000624204 TRAV12-2A0A075B6T6 113 aa11.38□□□□□ -0.59
PMS1-221ENST00000624204 ZNF22P17026 224 aaPredicted RBP11.38□□□□□ -0.59
PMS1-221ENST00000624204 POLR2KP53803 58 aaKnown RBP11.38□□□□□ -0.59
PMS1-221ENST00000624204 DUX5Q96PT3 197 aa11.38□□□□□ -0.59
PMS1-221ENST00000624204 YAE1D1Q9NRH1 226 aa11.38□□□□□ -0.59
PMS1-221ENST00000624204 MDFICQ9P1T7 246 aa11.38□□□□□ -0.59
PMS1-221ENST00000624204 ICOSQ9Y6W8 199 aa11.38□□□□□ -0.59
PMS1-221ENST00000624204 PTPN13Q12923 2485 aa11.38□□□□□ -0.59
PMS1-221ENST00000624204 CD3EP07766 207 aa11.38□□□□□ -0.59
PMS1-221ENST00000624204 C9orf139Q6ZV77 190 aa11.38□□□□□ -0.59
PMS1-221ENST00000624204 FAM110DQ8TAY7 271 aaPredicted RBP11.38□□□□□ -0.59
PMS1-221ENST00000624204 TMEM223A0PJW6 202 aa11.38□□□□□ -0.59
PMS1-221ENST00000624204 Q8N9W7 124 aa11.38□□□□□ -0.59
PMS1-221ENST00000624204 KLK5Q9Y337 293 aaPredicted RBP11.38□□□□□ -0.59
PMS1-221ENST00000624204 TRGV11A0A075B6L2 103 aa11.37□□□□□ -0.59
PMS1-221ENST00000624204 A0A0J9YXY3 114 aa11.37□□□□□ -0.59
PMS1-221ENST00000624204 TRBV30A0A0K0K1B3 111 aa11.37□□□□□ -0.59
PMS1-221ENST00000624204 NCOR2Q9Y618 2525 aa11.37□□□□□ -0.59
PMS1-221ENST00000624204 CSMD2Q7Z408 3487 aa11.37□□□□□ -0.59
PMS1-221ENST00000624204 TRBV12-3P01733 135 aa11.37□□□□□ -0.59
PMS1-221ENST00000624204 CENPEQ02224 2701 aa11.36□□□□□ -0.59
PMS1-221ENST00000624204 LENEPQ9Y5L5 61 aa11.36□□□□□ -0.59
PMS1-221ENST00000624204 PRRC2AP48634 2157 aaKnown RBP11.35□□□□□ -0.59
PMS1-221ENST00000624204 LOC107984640A0A0U1RRK4 108 aa11.35□□□□□ -0.59
PMS1-221ENST00000624204 LY6G5BQ8NDX9 201 aa11.35□□□□□ -0.59
PMS1-221ENST00000624204 TMEM101Q96IK0 257 aa11.35□□□□□ -0.59
PMS1-221ENST00000624204 USP9YO00507 2555 aaPredicted RBP11.35□□□□□ -0.59
PMS1-221ENST00000624204 ODF3BA8MYP8 253 aa11.35□□□□□ -0.59
PMS1-221ENST00000624204 LINC00315P59091 139 aa11.35□□□□□ -0.59
PMS1-221ENST00000624204 C9orf153Q5TBE3 101 aa11.35□□□□□ -0.59
PMS1-221ENST00000624204 SPANXA1Q9NS26 97 aa11.35□□□□□ -0.59
PMS1-221ENST00000624204 UNQ9165/PRO28630Q6UXU0 137 aa11.35□□□□□ -0.59
PMS1-221ENST00000624204 CRYBG3Q68DQ2 2970 aa11.34□□□□□ -0.59
PMS1-221ENST00000624204 LY6EQ16553 131 aa11.34□□□□□ -0.59
PMS1-221ENST00000624204 TMEM126AQ9H061 195 aa11.34□□□□□ -0.59
PMS1-221ENST00000624204 Q8N6K4 173 aa11.34□□□□□ -0.59
PMS1-221ENST00000624204 LINC01587Q99440 93 aa11.34□□□□□ -0.59
PMS1-221ENST00000624204 KLK9Q9UKQ9 250 aa11.34□□□□□ -0.59
PMS1-221ENST00000624204 IGHV4OR15-8A0A075B7B6 117 aa11.34□□□□□ -0.59
PMS1-221ENST00000624204 A0A087WW49 117 aa11.34□□□□□ -0.59
PMS1-221ENST00000624204 PLA2G2CQ5R387 149 aa11.34□□□□□ -0.59
PMS1-221ENST00000624204 KIF25-AS1Q9Y6Z4 181 aa11.34□□□□□ -0.59
PMS1-221ENST00000624204 KNCNA6PVL3 124 aa11.33□□□□□ -0.6
PMS1-221ENST00000624204 H3BT86 120 aa11.33□□□□□ -0.6
PMS1-221ENST00000624204 LINC00694P0DN24 101 aa11.33□□□□□ -0.6
PMS1-221ENST00000624204 ITLN2Q8WWU7 325 aaPredicted RBP11.33□□□□□ -0.6
PMS1-221ENST00000624204 TIMM21Q9BVV7 248 aa11.33□□□□□ -0.6
PMS1-221ENST00000624204 TLN2Q9Y4G6 2542 aa11.33□□□□□ -0.6
PMS1-221ENST00000624204 OOSP1A8MZH6 123 aa11.33□□□□□ -0.6
PMS1-221ENST00000624204 OVOL1O14753 267 aa11.33□□□□□ -0.6
PMS1-221ENST00000624204 IGHV3-30-3P0DP02 117 aa11.33□□□□□ -0.6
PMS1-221ENST00000624204 EDN2P20800 178 aa11.32□□□□□ -0.6
PMS1-221ENST00000624204 ADAMTSL4-AS1Q5T5F5 129 aa11.32□□□□□ -0.6
PMS1-221ENST00000624204 CHD8Q9HCK8 2581 aa11.32□□□□□ -0.6
PMS1-221ENST00000624204 TRAV41A0A0B4J266 112 aa11.32□□□□□ -0.6
PMS1-221ENST00000624204 PRM2P04554 102 aa11.32□□□□□ -0.6
PMS1-221ENST00000624204 M0R1W7 72 aa11.31□□□□□ -0.6
PMS1-221ENST00000624204 TRBV7-1A0A0A6YYK4 115 aa11.31□□□□□ -0.6
PMS1-221ENST00000624204 TRBV27A0A0K0K1C4 114 aa11.31□□□□□ -0.6
PMS1-221ENST00000624204 KLRB1Q12918 225 aa11.31□□□□□ -0.6
PMS1-221ENST00000624204 I3L3M4 83 aa11.3□□□□□ -0.6
PMS1-221ENST00000624204 IGFL3Q6UXB1 125 aa11.3□□□□□ -0.6
PMS1-221ENST00000624204 NDUFA12Q9UI09 145 aa11.3□□□□□ -0.6
PMS1-221ENST00000624204 MED14OSP0DP75 135 aa11.3□□□□□ -0.6
PMS1-221ENST00000624204 U3KQE9 123 aa11.3□□□□□ -0.6
PMS1-221ENST00000624204 CD28P10747 220 aa11.29□□□□□ -0.6
PMS1-221ENST00000624204 JMJD1CQ15652 2540 aa11.29□□□□□ -0.6
PMS1-221ENST00000624204 IGHV3-38A0A0C4DH36 116 aa11.28□□□□□ -0.6
PMS1-221ENST00000624204 LST1O00453 97 aa11.28□□□□□ -0.6
PMS1-221ENST00000624204 TRBV7-7A0A0K0K1E9 115 aa11.28□□□□□ -0.6
PMS1-221ENST00000624204 FAM240AA0A1B0GVK7 77 aa11.28□□□□□ -0.6
PMS1-221ENST00000624204 IGHV1-69P01742 117 aa11.28□□□□□ -0.6
PMS1-221ENST00000624204 PF4V1P10720 104 aa11.28□□□□□ -0.6
PMS1-221ENST00000624204 IGLV4-3A0A075B6K6 122 aa11.28□□□□□ -0.6
PMS1-221ENST00000624204 POLQO75417 2590 aa11.28□□□□□ -0.6
PMS1-221ENST00000624204 HRNRQ86YZ3 2850 aaPredicted RBP11.27□□□□□ -0.6
PMS1-221ENST00000624204 EBI3Q14213 229 aa11.27□□□□□ -0.6
PMS1-221ENST00000624204 BRD3OSQ6XYD6 125 aa11.27□□□□□ -0.6
PMS1-221ENST00000624204 C20orf203Q8NBC4 194 aa11.27□□□□□ -0.6
PMS1-221ENST00000624204 ATP5J2P56134 94 aa11.27□□□□□ -0.61
PMS1-221ENST00000624204 MINOS1Q5TGZ0 78 aa11.27□□□□□ -0.61
PMS1-221ENST00000624204 EDA2RQ9HAV5 297 aa11.27□□□□□ -0.61
PMS1-221ENST00000624204 HOXD3P31249 432 aaPredicted RBP11.26□□□□□ -0.61
PMS1-221ENST00000624204 LITAFQ99732 161 aa11.26□□□□□ -0.61
PMS1-221ENST00000624204 PROK1P58294 105 aa11.26□□□□□ -0.61
PMS1-221ENST00000624204 POM121L12Q8N7R1 296 aa11.26□□□□□ -0.61
PMS1-221ENST00000624204 NDUFA7O95182 113 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 138.5 ms