RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 KIR2DL5BA0A0G2JPC4 375 aa15.43■□□□□ 0.06
SPAST-204ENST00000621856 KIR2DL5AQ8N109 375 aa15.43■□□□□ 0.06
SPAST-204ENST00000621856 ZNF664Q8N3J9 261 aa15.43■□□□□ 0.06
SPAST-204ENST00000621856 KIR2DL5BQ8NHK3 375 aa15.43■□□□□ 0.06
SPAST-204ENST00000621856 PLAC8L1A1L4L8 177 aa15.42■□□□□ 0.06
SPAST-204ENST00000621856 ATOH7Q8N100 152 aa15.42■□□□□ 0.06
SPAST-204ENST00000621856 PKIAP61925 76 aa15.41■□□□□ 0.06
SPAST-204ENST00000621856 ZFP2Q6ZN57 461 aa15.41■□□□□ 0.06
SPAST-204ENST00000621856 KIR2DL4Q99706 377 aa15.41■□□□□ 0.06
SPAST-204ENST00000621856 TSTD3H0UI37 97 aa15.4■□□□□ 0.06
SPAST-204ENST00000621856 Q6ZSN1 163 aa15.4■□□□□ 0.06
SPAST-204ENST00000621856 MAST4O15021 2626 aa15.4■□□□□ 0.06
SPAST-204ENST00000621856 TRBV27A0A0K0K1C4 114 aa15.4■□□□□ 0.06
SPAST-204ENST00000621856 P0DMU3 169 aa15.4■□□□□ 0.06
SPAST-204ENST00000621856 FAM231AP0DMU4 169 aa15.4■□□□□ 0.06
SPAST-204ENST00000621856 FAM231CP0DMU5 169 aa15.4■□□□□ 0.06
SPAST-204ENST00000621856 OVOL2Q9BRP0 275 aa15.4■□□□□ 0.06
SPAST-204ENST00000621856 PAM16Q9Y3D7 125 aa15.4■□□□□ 0.06
SPAST-204ENST00000621856 TRAV4A0A0B4J268 109 aa15.39■□□□□ 0.05
SPAST-204ENST00000621856 IGHV3-53P01767 116 aa15.39■□□□□ 0.05
SPAST-204ENST00000621856 DEFB104AQ8WTQ1 72 aa15.39■□□□□ 0.05
SPAST-204ENST00000621856 GAGE12BA1L429 117 aa15.38■□□□□ 0.05
SPAST-204ENST00000621856 ATP5LO75964 103 aa15.38■□□□□ 0.05
SPAST-204ENST00000621856 GAGE7O76087 117 aa15.38■□□□□ 0.05
SPAST-204ENST00000621856 GAGE12FP0CL80 117 aa15.38■□□□□ 0.05
SPAST-204ENST00000621856 GAGE12GP0CL81 117 aa15.38■□□□□ 0.05
SPAST-204ENST00000621856 GAGE12IP0CL82 117 aa15.38■□□□□ 0.05
SPAST-204ENST00000621856 IGHV4-30-4P0DP06 118 aa15.38■□□□□ 0.05
SPAST-204ENST00000621856 EMP1P54849 157 aa15.38■□□□□ 0.05
SPAST-204ENST00000621856 TNFRSF18Q9Y5U5 241 aa15.38■□□□□ 0.05
SPAST-204ENST00000621856 DEFB135Q30KP9 77 aa15.37■□□□□ 0.05
SPAST-204ENST00000621856 LINC01545Q5VT33 79 aa15.37■□□□□ 0.05
SPAST-204ENST00000621856 ZNF479Q96JC4 524 aa15.37■□□□□ 0.05
SPAST-204ENST00000621856 TRGV2A0A075B6R0 118 aa15.37■□□□□ 0.05
SPAST-204ENST00000621856 SMIM9A6NGZ8 99 aa15.37■□□□□ 0.05
SPAST-204ENST00000621856 KRTAP10-11P60412 298 aa15.37■□□□□ 0.05
SPAST-204ENST00000621856 TOMM6Q96B49 74 aa15.37■□□□□ 0.05
SPAST-204ENST00000621856 PMCHL2Q9BQD1 86 aa15.37■□□□□ 0.05
SPAST-204ENST00000621856 X6R8D5 127 aa15.37■□□□□ 0.05
SPAST-204ENST00000621856 STAB1Q9NY15 2570 aa15.36■□□□□ 0.05
SPAST-204ENST00000621856 G0S2P27469 103 aa15.36■□□□□ 0.05
SPAST-204ENST00000621856 I3L3M4 83 aa15.35■□□□□ 0.05
SPAST-204ENST00000621856 C2orf66Q6UXQ4 117 aa15.35■□□□□ 0.05
SPAST-204ENST00000621856 SCGB3A1Q96QR1 104 aa15.35■□□□□ 0.05
SPAST-204ENST00000621856 ZMAT5Q9UDW3 170 aaKnown RBP15.35■□□□□ 0.05
SPAST-204ENST00000621856 PRSS1P07477 247 aa15.34■□□□□ 0.05
SPAST-204ENST00000621856 LGALS9CQ6DKI2 356 aa15.34■□□□□ 0.05
SPAST-204ENST00000621856 NEXN-AS1Q8NBZ9 246 aa15.34■□□□□ 0.05
SPAST-204ENST00000621856 TRRAPQ9Y4A5 3859 aa15.34■□□□□ 0.05
SPAST-204ENST00000621856 EGFEM1PQ0D2K5 195 aa15.34■□□□□ 0.05
SPAST-204ENST00000621856 SPATA45Q537H7 98 aa15.34■□□□□ 0.05
SPAST-204ENST00000621856 DNAJC30Q96LL9 226 aa15.34■□□□□ 0.05
SPAST-204ENST00000621856 TRAV9-2A0A087WT02 112 aa15.33■□□□□ 0.04
SPAST-204ENST00000621856 CYSLTR1Q9Y271 337 aa15.33■□□□□ 0.04
SPAST-204ENST00000621856 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.32■□□□□ 0.04
SPAST-204ENST00000621856 TSHBP01222 138 aa15.32■□□□□ 0.04
SPAST-204ENST00000621856 RHOHQ15669 191 aa15.32■□□□□ 0.04
SPAST-204ENST00000621856 MAJINQ3KP22 176 aa15.32■□□□□ 0.04
SPAST-204ENST00000621856 Q9UF83 564 aa15.32■□□□□ 0.04
SPAST-204ENST00000621856 Q6ZN92 141 aa15.31■□□□□ 0.04
SPAST-204ENST00000621856 OR11H2Q8NH07 326 aa15.31■□□□□ 0.04
SPAST-204ENST00000621856 TP53TG1Q9Y2A0 90 aa15.31■□□□□ 0.04
SPAST-204ENST00000621856 RIPPLY3P57055 190 aa15.31■□□□□ 0.04
SPAST-204ENST00000621856 LINC01549A6NIU2 74 aa15.3■□□□□ 0.04
SPAST-204ENST00000621856 K7EQD1 137 aa15.3■□□□□ 0.04
SPAST-204ENST00000621856 CIDEAO60543 219 aa15.3■□□□□ 0.04
SPAST-204ENST00000621856 HSBP1L1C9JCN9 74 aa15.29■□□□□ 0.04
SPAST-204ENST00000621856 G3V4G9 280 aa15.29■□□□□ 0.04
SPAST-204ENST00000621856 ERASQ7Z444 233 aa15.29■□□□□ 0.04
SPAST-204ENST00000621856 TRGV4A0A0C4DH28 118 aa15.28■□□□□ 0.04
SPAST-204ENST00000621856 hDV102S1A0JD36 115 aa15.28■□□□□ 0.04
SPAST-204ENST00000621856 DEFB130BP0DP73 79 aa15.28■□□□□ 0.04
SPAST-204ENST00000621856 DEFB130AP0DP74 79 aa15.28■□□□□ 0.04
SPAST-204ENST00000621856 RPL39P62891 51 aaKnown RBP15.28■□□□□ 0.04
SPAST-204ENST00000621856 TRBV10-1A0A0K0K1A3 114 aa15.27■□□□□ 0.04
SPAST-204ENST00000621856 LINC00587B1AMM8 73 aa15.27■□□□□ 0.04
SPAST-204ENST00000621856 DDTP30046 118 aa15.27■□□□□ 0.04
SPAST-204ENST00000621856 ODF1Q14990 250 aa15.27■□□□□ 0.04
SPAST-204ENST00000621856 SLC25A29Q8N8R3 303 aa15.27■□□□□ 0.04
SPAST-204ENST00000621856 ZNRF2Q8NHG8 242 aa15.27■□□□□ 0.04
SPAST-204ENST00000621856 PHLDA1Q8WV24 401 aaPredicted RBP15.27■□□□□ 0.04
SPAST-204ENST00000621856 DKK2Q9UBU2 259 aa15.27■□□□□ 0.04
SPAST-204ENST00000621856 RPL36AP83881 106 aaKnown RBP15.26■□□□□ 0.03
SPAST-204ENST00000621856 RPL36ALQ969Q0 106 aaKnown RBP15.26■□□□□ 0.03
SPAST-204ENST00000621856 RNF183Q96D59 192 aa15.26■□□□□ 0.03
SPAST-204ENST00000621856 COL6A5A8TX70 2615 aa15.26■□□□□ 0.03
SPAST-204ENST00000621856 IGHV4-28A0A0C4DH34 117 aa15.26■□□□□ 0.03
SPAST-204ENST00000621856 TRBV7-3A0A075B6L6 115 aa15.25■□□□□ 0.03
SPAST-204ENST00000621856 IGHV3-38A0A0C4DH36 116 aa15.25■□□□□ 0.03
SPAST-204ENST00000621856 MIFP14174 115 aa15.25■□□□□ 0.03
SPAST-204ENST00000621856 LINC00612Q8N6U2 182 aa15.25■□□□□ 0.03
SPAST-204ENST00000621856 LYRM9A8MSI8 78 aa15.24■□□□□ 0.03
SPAST-204ENST00000621856 FAM222AQ5U5X8 452 aa15.24■□□□□ 0.03
SPAST-204ENST00000621856 C20orf203Q8NBC4 194 aa15.24■□□□□ 0.03
SPAST-204ENST00000621856 A0A087WX48 190 aa15.23■□□□□ 0.03
SPAST-204ENST00000621856 A8MZ25 164 aa15.23■□□□□ 0.03
SPAST-204ENST00000621856 DEFB4AO15263 64 aa15.23■□□□□ 0.03
SPAST-204ENST00000621856 COTL1Q14019 142 aa15.23■□□□□ 0.03
SPAST-204ENST00000621856 BAALCQ8WXS3 180 aa15.23■□□□□ 0.03
SPAST-204ENST00000621856 TMEM141Q96I45 108 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms