RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 NDUFA1O15239 70 aa6.34□□□□□ -1.39
ALMS1-208ENST00000620466 CRYBA4P53673 196 aa6.34□□□□□ -1.39
ALMS1-208ENST00000620466 HIST2H2BCQ6DN03 193 aa6.34□□□□□ -1.39
ALMS1-208ENST00000620466 RNF185Q96GF1 192 aa6.34□□□□□ -1.39
ALMS1-208ENST00000620466 K7EMT4 169 aa6.34□□□□□ -1.39
ALMS1-208ENST00000620466 NDUFB1O75438 58 aa6.34□□□□□ -1.4
ALMS1-208ENST00000620466 SEC61GP60059 68 aa6.34□□□□□ -1.4
ALMS1-208ENST00000620466 CLUHP3Q96NS8 147 aa6.34□□□□□ -1.4
ALMS1-208ENST00000620466 PRB2P02812 416 aaPredicted RBP6.33□□□□□ -1.4
ALMS1-208ENST00000620466 Q8N976 141 aa6.33□□□□□ -1.4
ALMS1-208ENST00000620466 DNAJC9-AS1A6NH13 148 aa6.33□□□□□ -1.4
ALMS1-208ENST00000620466 MED12LQ86YW9 2145 aa6.33□□□□□ -1.4
ALMS1-208ENST00000620466 VSIG2Q96IQ7 327 aa6.33□□□□□ -1.4
ALMS1-208ENST00000620466 SND1-IT1Q9HBX3 110 aa6.33□□□□□ -1.4
ALMS1-208ENST00000620466 MDFICQ9P1T7 246 aa6.33□□□□□ -1.4
ALMS1-208ENST00000620466 A6NDX4 124 aa6.33□□□□□ -1.4
ALMS1-208ENST00000620466 WFDC9Q8NEX5 89 aa6.33□□□□□ -1.4
ALMS1-208ENST00000620466 EML5Q05BV3 1969 aa6.33□□□□□ -1.4
ALMS1-208ENST00000620466 OPRPNQ99935 248 aaPredicted RBP6.32□□□□□ -1.4
ALMS1-208ENST00000620466 ZFAND3Q9H8U3 227 aa6.32□□□□□ -1.4
ALMS1-208ENST00000620466 MAP1BP46821 2468 aaKnown RBP6.32□□□□□ -1.4
ALMS1-208ENST00000620466 IGF1P05019 195 aa6.32□□□□□ -1.4
ALMS1-208ENST00000620466 B9D2Q9BPU9 175 aa6.32□□□□□ -1.4
ALMS1-208ENST00000620466 KIAA1549Q9HCM3 1950 aa6.32□□□□□ -1.4
ALMS1-208ENST00000620466 H3BQ85 93 aa6.32□□□□□ -1.4
ALMS1-208ENST00000620466 FSTL3O95633 263 aa6.32□□□□□ -1.4
ALMS1-208ENST00000620466 FOXI1Q12951 378 aa6.32□□□□□ -1.4
ALMS1-208ENST00000620466 GPHB5Q86YW7 130 aa6.32□□□□□ -1.4
ALMS1-208ENST00000620466 TRBV7-3A0A075B6L6 115 aa6.32□□□□□ -1.4
ALMS1-208ENST00000620466 RBM3P98179 157 aaKnown RBP6.31□□□□□ -1.4
ALMS1-208ENST00000620466 NEXN-AS1Q8NBZ9 246 aa6.31□□□□□ -1.4
ALMS1-208ENST00000620466 K7ERS5 55 aa6.31□□□□□ -1.4
ALMS1-208ENST00000620466 NDUFA11Q86Y39 141 aa6.31□□□□□ -1.4
ALMS1-208ENST00000620466 DAND5Q8N907 189 aa6.31□□□□□ -1.4
ALMS1-208ENST00000620466 IGKV2D-26A0A0A0MRZ7 120 aa6.31□□□□□ -1.4
ALMS1-208ENST00000620466 LMO4P61968 165 aa6.31□□□□□ -1.4
ALMS1-208ENST00000620466 C2orf91Q6ZV80 131 aa6.31□□□□□ -1.4
ALMS1-208ENST00000620466 TEN1Q86WV5 123 aa6.3□□□□□ -1.4
ALMS1-208ENST00000620466 IL17DQ8TAD2 202 aa6.3□□□□□ -1.4
ALMS1-208ENST00000620466 TMEM61Q8N0U2 210 aa6.3□□□□□ -1.4
ALMS1-208ENST00000620466 A0A0J9YX75 114 aa6.3□□□□□ -1.4
ALMS1-208ENST00000620466 EBI3Q14213 229 aa6.3□□□□□ -1.4
ALMS1-208ENST00000620466 MAPKAPK5-AS1Q8N8E1 139 aa6.3□□□□□ -1.4
ALMS1-208ENST00000620466 WFDC11Q8NEX6 87 aa6.3□□□□□ -1.4
ALMS1-208ENST00000620466 URB1-AS1Q96HZ7 61 aa6.3□□□□□ -1.4
ALMS1-208ENST00000620466 C14orf132Q9NPU4 83 aa6.3□□□□□ -1.4
ALMS1-208ENST00000620466 COL4A2P08572 1712 aa6.3□□□□□ -1.4
ALMS1-208ENST00000620466 MED13Q9UHV7 2174 aa6.29□□□□□ -1.4
ALMS1-208ENST00000620466 C11orf71Q6IPW1 123 aa6.29□□□□□ -1.4
ALMS1-208ENST00000620466 C11orf45Q8TAV5 145 aa6.29□□□□□ -1.4
ALMS1-208ENST00000620466 PRORYQ9H606 182 aa6.29□□□□□ -1.4
ALMS1-208ENST00000620466 GTF3C1Q12789 2109 aa6.29□□□□□ -1.4
ALMS1-208ENST00000620466 LINC01620Q4KN68 170 aa6.29□□□□□ -1.4
ALMS1-208ENST00000620466 DIRC1Q969H9 104 aa6.29□□□□□ -1.4
ALMS1-208ENST00000620466 KLK12Q9UKR0 248 aa6.29□□□□□ -1.4
ALMS1-208ENST00000620466 NFE4Q86UQ8 179 aa6.29□□□□□ -1.4
ALMS1-208ENST00000620466 SMIM20Q8N5G0 67 aa6.29□□□□□ -1.4
ALMS1-208ENST00000620466 TPRP12270 2363 aaKnown RBP6.29□□□□□ -1.4
ALMS1-208ENST00000620466 C19orf84I3L1E1 186 aa6.29□□□□□ -1.4
ALMS1-208ENST00000620466 TNFRSF13BO14836 293 aaPredicted RBP6.29□□□□□ -1.4
ALMS1-208ENST00000620466 SPAG11BQ08648 103 aa6.29□□□□□ -1.4
ALMS1-208ENST00000620466 TMEM263Q8WUH6 116 aaKnown RBP6.29□□□□□ -1.4
ALMS1-208ENST00000620466 MAP6D1Q9H9H5 199 aa6.29□□□□□ -1.4
ALMS1-208ENST00000620466 TMEM89A2RUT3 159 aa6.28□□□□□ -1.4
ALMS1-208ENST00000620466 H0Y9J4 135 aa6.28□□□□□ -1.4
ALMS1-208ENST00000620466 TCL1BO95988 128 aa6.28□□□□□ -1.4
ALMS1-208ENST00000620466 NREPQ16612 68 aa6.28□□□□□ -1.4
ALMS1-208ENST00000620466 C20orf203Q8NBC4 194 aa6.28□□□□□ -1.4
ALMS1-208ENST00000620466 SPATA25Q9BR10 227 aa6.28□□□□□ -1.4
ALMS1-208ENST00000620466 CXCL5P42830 114 aa6.28□□□□□ -1.4
ALMS1-208ENST00000620466 MP68P56378 58 aa6.28□□□□□ -1.4
ALMS1-208ENST00000620466 CEMP1Q6PRD7 247 aaPredicted RBP6.28□□□□□ -1.4
ALMS1-208ENST00000620466 PTH2Q96A98 100 aa6.28□□□□□ -1.4
ALMS1-208ENST00000620466 A0A0B4J2C4 111 aa6.28□□□□□ -1.4
ALMS1-208ENST00000620466 RNF183Q96D59 192 aa6.28□□□□□ -1.4
ALMS1-208ENST00000620466 NCOR1O75376 2440 aa6.28□□□□□ -1.4
ALMS1-208ENST00000620466 IGKV3D-7A0A0C4DH55 119 aa6.28□□□□□ -1.4
ALMS1-208ENST00000620466 ACYP1P07311 99 aa6.28□□□□□ -1.4
ALMS1-208ENST00000620466 Q8N6K4 173 aa6.28□□□□□ -1.4
ALMS1-208ENST00000620466 H0YGX0 51 aa6.28□□□□□ -1.4
ALMS1-208ENST00000620466 P0DMU3 169 aa6.28□□□□□ -1.4
ALMS1-208ENST00000620466 FAM231AP0DMU4 169 aa6.28□□□□□ -1.4
ALMS1-208ENST00000620466 FAM231CP0DMU5 169 aa6.28□□□□□ -1.4
ALMS1-208ENST00000620466 CLEC2BQ92478 149 aa6.28□□□□□ -1.4
ALMS1-208ENST00000620466 SPANXB1Q9NS25 103 aaPredicted RBP6.28□□□□□ -1.4
ALMS1-208ENST00000620466 RBX1P62877 108 aa6.28□□□□□ -1.4
ALMS1-208ENST00000620466 HIGD2BQ4VC39 106 aa6.28□□□□□ -1.4
ALMS1-208ENST00000620466 GPR179Q6PRD1 2367 aa6.27□□□□□ -1.41
ALMS1-208ENST00000620466 ADAMTS20P59510 1910 aa6.27□□□□□ -1.41
ALMS1-208ENST00000620466 C14orf177Q52M58 125 aa6.27□□□□□ -1.41
ALMS1-208ENST00000620466 IGHV1-58A0A0C4DH39 117 aa6.27□□□□□ -1.41
ALMS1-208ENST00000620466 GAS8-AS1O95177 125 aa6.27□□□□□ -1.41
ALMS1-208ENST00000620466 TECTAO75443 2155 aa6.27□□□□□ -1.41
ALMS1-208ENST00000620466 INTS1Q8N201 2190 aaKnown RBP6.27□□□□□ -1.41
ALMS1-208ENST00000620466 A0A1B0GX51 115 aa6.27□□□□□ -1.41
ALMS1-208ENST00000620466 PSMB8P28062 276 aa6.27□□□□□ -1.41
ALMS1-208ENST00000620466 INSL3P51460 131 aa6.27□□□□□ -1.41
ALMS1-208ENST00000620466 NRACQ8N912 160 aa6.27□□□□□ -1.41
ALMS1-208ENST00000620466 C11orf21Q9P2W6 132 aa6.27□□□□□ -1.41
ALMS1-208ENST00000620466 TRBV10-2A0A0K0K1G8 114 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms