RNA–Protein interactions for RNA: ENST00000618819.4

PTPN9-206, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN9, Length 7,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-206ENST00000618819 FAM19A1Q7Z5A9 133 aa11.09□□□□□ -0.63
PTPN9-206ENST00000618819 POM121L12Q8N7R1 296 aa11.09□□□□□ -0.63
PTPN9-206ENST00000618819 ARHGAP21Q5T5U3 1957 aa11.09□□□□□ -0.63
PTPN9-206ENST00000618819 FAM167A-AS1Q96KT0 104 aa11.09□□□□□ -0.63
PTPN9-206ENST00000618819 IGHV7-81A0A0B4J1V7 117 aa11.09□□□□□ -0.63
PTPN9-206ENST00000618819 IGKV1-17P01599 117 aa11.09□□□□□ -0.63
PTPN9-206ENST00000618819 BRCA1P38398 1863 aaKnown RBP11.09□□□□□ -0.63
PTPN9-206ENST00000618819 IGKV1D-37A0A075B6S9 117 aa11.09□□□□□ -0.63
PTPN9-206ENST00000618819 DEFB135Q30KP9 77 aa11.09□□□□□ -0.63
PTPN9-206ENST00000618819 Q8N9W7 124 aa11.09□□□□□ -0.63
PTPN9-206ENST00000618819 C20orf203Q8NBC4 194 aa11.09□□□□□ -0.63
PTPN9-206ENST00000618819 RBX1P62877 108 aa11.08□□□□□ -0.63
PTPN9-206ENST00000618819 PCNX2A6NKB5 2137 aa11.08□□□□□ -0.64
PTPN9-206ENST00000618819 C9orf66Q5T8R8 295 aa11.08□□□□□ -0.64
PTPN9-206ENST00000618819 C17orf82Q86X59 251 aaPredicted RBP11.08□□□□□ -0.64
PTPN9-206ENST00000618819 IGLV11-55A0A075B6I3 123 aa11.07□□□□□ -0.64
PTPN9-206ENST00000618819 FAM19A3Q7Z5A8 133 aa11.07□□□□□ -0.64
PTPN9-206ENST00000618819 CCKP06307 115 aa11.07□□□□□ -0.64
PTPN9-206ENST00000618819 UBR3Q6ZT12 1888 aa11.07□□□□□ -0.64
PTPN9-206ENST00000618819 CENPVL3A0A0U1RRI6 287 aa11.07□□□□□ -0.64
PTPN9-206ENST00000618819 NDUFC1O43677 76 aa11.07□□□□□ -0.64
PTPN9-206ENST00000618819 LINC00269Q8N2A0 174 aa11.06□□□□□ -0.64
PTPN9-206ENST00000618819 NRXN2Q9P2S2 1712 aa11.06□□□□□ -0.64
PTPN9-206ENST00000618819 PLCE1Q9P212 2302 aa11.06□□□□□ -0.64
PTPN9-206ENST00000618819 IGHV4-61A0A0C4DH41 118 aa11.06□□□□□ -0.64
PTPN9-206ENST00000618819 NANOS2P60321 138 aaKnown RBP11.06□□□□□ -0.64
PTPN9-206ENST00000618819 CRIPAKQ8N1N5 446 aa11.06□□□□□ -0.64
PTPN9-206ENST00000618819 LCTP09848 1927 aa11.06□□□□□ -0.64
PTPN9-206ENST00000618819 SPINK6Q6UWN8 80 aa11.05□□□□□ -0.64
PTPN9-206ENST00000618819 C9orf85Q96MD7 179 aa11.05□□□□□ -0.64
PTPN9-206ENST00000618819 COX7CP15954 63 aa11.05□□□□□ -0.64
PTPN9-206ENST00000618819 Q8N9L7 120 aa11.05□□□□□ -0.64
PTPN9-206ENST00000618819 COL4A5P29400 1685 aa11.05□□□□□ -0.64
PTPN9-206ENST00000618819 TP53TG3Q9ULZ0 132 aa11.05□□□□□ -0.64
PTPN9-206ENST00000618819 TRBV6-1A0A0K0K1D8 114 aa11.05□□□□□ -0.64
PTPN9-206ENST00000618819 PLA2G5P39877 138 aa11.04□□□□□ -0.64
PTPN9-206ENST00000618819 MAPKAPK5-AS1Q8N8E1 139 aa11.04□□□□□ -0.64
PTPN9-206ENST00000618819 IGLV1-44P01699 117 aa11.04□□□□□ -0.64
PTPN9-206ENST00000618819 Q6Q795 121 aa11.04□□□□□ -0.64
PTPN9-206ENST00000618819 C22orf34Q6ZV56 151 aa11.04□□□□□ -0.64
PTPN9-206ENST00000618819 ZFAND2AQ8N6M9 145 aa11.04□□□□□ -0.64
PTPN9-206ENST00000618819 LRRC75A-AS1Q8N1F1 130 aa11.04□□□□□ -0.64
PTPN9-206ENST00000618819 USF3Q68DE3 2245 aa11.04□□□□□ -0.64
PTPN9-206ENST00000618819 XIRP1Q702N8 1843 aaKnown RBP11.04□□□□□ -0.64
PTPN9-206ENST00000618819 CACNA1EQ15878 2313 aa11.03□□□□□ -0.64
PTPN9-206ENST00000618819 NCKAP5O14513 1909 aa11.03□□□□□ -0.64
PTPN9-206ENST00000618819 ZGRF1Q86YA3 2104 aa11.03□□□□□ -0.64
PTPN9-206ENST00000618819 A0A087WZ39 114 aa11.03□□□□□ -0.64
PTPN9-206ENST00000618819 UFSP1Q6NVU6 142 aa11.03□□□□□ -0.64
PTPN9-206ENST00000618819 C11orf53Q8IXP5 236 aa11.03□□□□□ -0.64
PTPN9-206ENST00000618819 ROS1P08922 2347 aa11.02□□□□□ -0.64
PTPN9-206ENST00000618819 TET1Q8NFU7 2136 aa11.02□□□□□ -0.65
PTPN9-206ENST00000618819 FAM19A5Q7Z5A7 132 aaPredicted RBP11.02□□□□□ -0.65
PTPN9-206ENST00000618819 SCN10AQ9Y5Y9 1956 aa11.02□□□□□ -0.65
PTPN9-206ENST00000618819 ANK1P16157 1881 aa11.02□□□□□ -0.65
PTPN9-206ENST00000618819 GDF5OSQ5U4N7 250 aa11.02□□□□□ -0.65
PTPN9-206ENST00000618819 KAAG1Q9UBP8 84 aa11.02□□□□□ -0.65
PTPN9-206ENST00000618819 LINC00467Q9BRT7 94 aa11.02□□□□□ -0.65
PTPN9-206ENST00000618819 MED14OSP0DP75 135 aa11.01□□□□□ -0.65
PTPN9-206ENST00000618819 XGP55808 180 aa11.01□□□□□ -0.65
PTPN9-206ENST00000618819 LINC00308Q8TCZ7 52 aa11.01□□□□□ -0.65
PTPN9-206ENST00000618819 PKDREJQ9NTG1 2253 aa11.01□□□□□ -0.65
PTPN9-206ENST00000618819 SMIM9A6NGZ8 99 aa11.01□□□□□ -0.65
PTPN9-206ENST00000618819 REG3AQ06141 175 aa11.01□□□□□ -0.65
PTPN9-206ENST00000618819 IGLV3-1P01715 115 aa11.01□□□□□ -0.65
PTPN9-206ENST00000618819 XAGE1AQ9HD64 81 aa11.01□□□□□ -0.65
PTPN9-206ENST00000618819 CDKN2A-AS1Q9UH64 79 aa11.01□□□□□ -0.65
PTPN9-206ENST00000618819 PPDPFQ9H3Y8 114 aa11□□□□□ -0.65
PTPN9-206ENST00000618819 TMEM223A0PJW6 202 aa11□□□□□ -0.65
PTPN9-206ENST00000618819 C19orf71A6NCJ1 209 aa11□□□□□ -0.65
PTPN9-206ENST00000618819 ZNF80P51504 273 aaPredicted RBP11□□□□□ -0.65
PTPN9-206ENST00000618819 DENND4AQ7Z401 1863 aa11□□□□□ -0.65
PTPN9-206ENST00000618819 NEXN-AS1Q8NBZ9 246 aa11□□□□□ -0.65
PTPN9-206ENST00000618819 E7EUB6 86 aa10.99□□□□□ -0.65
PTPN9-206ENST00000618819 CELA1Q9UNI1 258 aa10.99□□□□□ -0.65
PTPN9-206ENST00000618819 SMIM26A0A096LP01 95 aa10.99□□□□□ -0.65
PTPN9-206ENST00000618819 C6orf99Q4VX62 202 aa10.99□□□□□ -0.65
PTPN9-206ENST00000618819 LINC00322Q6ZN03 302 aaPredicted RBP10.99□□□□□ -0.65
PTPN9-206ENST00000618819 INSL3P51460 131 aa10.99□□□□□ -0.65
PTPN9-206ENST00000618819 GRNP28799 593 aaKnown RBP10.99□□□□□ -0.65
PTPN9-206ENST00000618819 TRBV30A0A0K0K1B3 111 aa10.98□□□□□ -0.65
PTPN9-206ENST00000618819 CHCHD10Q8WYQ3 142 aaPredicted RBP10.98□□□□□ -0.65
PTPN9-206ENST00000618819 TSC2P49815 1807 aa10.98□□□□□ -0.65
PTPN9-206ENST00000618819 PSPHP1O15172 72 aa10.98□□□□□ -0.65
PTPN9-206ENST00000618819 COL6A6A6NMZ7 2263 aa10.98□□□□□ -0.65
PTPN9-206ENST00000618819 LYRM9A8MSI8 78 aa10.98□□□□□ -0.65
PTPN9-206ENST00000618819 C5orf56Q8N8D9 126 aa10.98□□□□□ -0.65
PTPN9-206ENST00000618819 HELZP42694 1942 aaKnown RBP10.98□□□□□ -0.65
PTPN9-206ENST00000618819 IGKV2-28A0A075B6P5 120 aa10.98□□□□□ -0.65
PTPN9-206ENST00000618819 IGKV2D-28P01615 120 aa10.98□□□□□ -0.65
PTPN9-206ENST00000618819 TRBV10-1A0A0K0K1A3 114 aa10.97□□□□□ -0.65
PTPN9-206ENST00000618819 A8MZ25 164 aa10.97□□□□□ -0.65
PTPN9-206ENST00000618819 MIFP14174 115 aa10.97□□□□□ -0.65
PTPN9-206ENST00000618819 EBI3Q14213 229 aa10.97□□□□□ -0.65
PTPN9-206ENST00000618819 UNQ9165/PRO28630Q6UXU0 137 aa10.97□□□□□ -0.65
PTPN9-206ENST00000618819 COL11A2P13942 1736 aaPredicted RBP10.97□□□□□ -0.65
PTPN9-206ENST00000618819 ZNF22P17026 224 aaPredicted RBP10.96□□□□□ -0.65
PTPN9-206ENST00000618819 A0A1B0GXF2 115 aa10.96□□□□□ -0.65
PTPN9-206ENST00000618819 PRO0255Q9UI72 69 aa10.96□□□□□ -0.65
PTPN9-206ENST00000618819 CACNA1BQ00975 2339 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms