RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 MRPL23Q16540 153 aaKnown RBP15.72■□□□□ 0.11
CBWD3-213ENST00000618217 LINC00694P0DN24 101 aa15.72■□□□□ 0.11
CBWD3-213ENST00000618217 RAB4AP20338 218 aa15.72■□□□□ 0.11
CBWD3-213ENST00000618217 FABP9Q0Z7S8 132 aa15.72■□□□□ 0.11
CBWD3-213ENST00000618217 AMN1Q8IY45 258 aa15.72■□□□□ 0.11
CBWD3-213ENST00000618217 FRZBQ92765 325 aa15.72■□□□□ 0.11
CBWD3-213ENST00000618217 COX19Q49B96 90 aa15.71■□□□□ 0.11
CBWD3-213ENST00000618217 FAM104BQ5XKR9 115 aa15.71■□□□□ 0.11
CBWD3-213ENST00000618217 RASL11AQ6T310 242 aa15.7■□□□□ 0.1
CBWD3-213ENST00000618217 TRAV26-2A0A0B4J265 109 aa15.69■□□□□ 0.1
CBWD3-213ENST00000618217 PHOX2AO14813 284 aa15.69■□□□□ 0.1
CBWD3-213ENST00000618217 TMEM136Q6ZRR5 245 aa15.69■□□□□ 0.1
CBWD3-213ENST00000618217 NEXN-AS1Q8NBZ9 246 aa15.69■□□□□ 0.1
CBWD3-213ENST00000618217 GNB1LQ9BYB4 327 aa15.69■□□□□ 0.1
CBWD3-213ENST00000618217 MRPL18Q9H0U6 180 aaKnown RBP15.69■□□□□ 0.1
CBWD3-213ENST00000618217 MT-ND6P03923 174 aa15.68■□□□□ 0.1
CBWD3-213ENST00000618217 GAGE12JA6NER3 117 aa15.68■□□□□ 0.1
CBWD3-213ENST00000618217 H7C1H1 209 aa15.68■□□□□ 0.1
CBWD3-213ENST00000618217 SRIP30626 198 aa15.68■□□□□ 0.1
CBWD3-213ENST00000618217 GAGE1Q13065 139 aa15.68■□□□□ 0.1
CBWD3-213ENST00000618217 GAGE4Q13068 117 aa15.68■□□□□ 0.1
CBWD3-213ENST00000618217 GAGE5Q13069 117 aa15.68■□□□□ 0.1
CBWD3-213ENST00000618217 GAGE13Q4V321 117 aa15.68■□□□□ 0.1
CBWD3-213ENST00000618217 TRBV7-3A0A075B6L6 115 aa15.67■□□□□ 0.1
CBWD3-213ENST00000618217 GAS8-AS1O95177 125 aa15.67■□□□□ 0.1
CBWD3-213ENST00000618217 NEGR1Q7Z3B1 354 aa15.67■□□□□ 0.1
CBWD3-213ENST00000618217 ZNRF2Q8NHG8 242 aa15.67■□□□□ 0.1
CBWD3-213ENST00000618217 HIST1H2BKO60814 126 aa15.66■□□□□ 0.1
CBWD3-213ENST00000618217 HLA-DQA1P01909 254 aa15.66■□□□□ 0.1
CBWD3-213ENST00000618217 HIST1H2BJP06899 126 aa15.66■□□□□ 0.1
CBWD3-213ENST00000618217 HIST1H2BOP23527 126 aa15.66■□□□□ 0.1
CBWD3-213ENST00000618217 HIST1H2BBP33778 126 aa15.66■□□□□ 0.1
CBWD3-213ENST00000618217 HIST1H2BDP58876 126 aa15.66■□□□□ 0.1
CBWD3-213ENST00000618217 HIST1H2BCP62807 126 aa15.66■□□□□ 0.1
CBWD3-213ENST00000618217 HIST2H2BEQ16778 126 aa15.66■□□□□ 0.1
CBWD3-213ENST00000618217 ESRGQ1W209 222 aa15.66■□□□□ 0.1
CBWD3-213ENST00000618217 MRPL51Q4U2R6 128 aaKnown RBP15.66■□□□□ 0.1
CBWD3-213ENST00000618217 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.66■□□□□ 0.1
CBWD3-213ENST00000618217 SH2D6Q7Z4S9 175 aa15.66■□□□□ 0.1
CBWD3-213ENST00000618217 HIST1H2BHQ93079 126 aa15.66■□□□□ 0.1
CBWD3-213ENST00000618217 MRAP2Q96G30 205 aa15.66■□□□□ 0.1
CBWD3-213ENST00000618217 HIST1H2BNQ99877 126 aa15.66■□□□□ 0.1
CBWD3-213ENST00000618217 HIST1H2BMQ99879 126 aa15.66■□□□□ 0.1
CBWD3-213ENST00000618217 UBE2D3P61077 147 aa15.65■□□□□ 0.1
CBWD3-213ENST00000618217 UBE2D2P62837 147 aa15.65■□□□□ 0.1
CBWD3-213ENST00000618217 RPL36AP83881 106 aaKnown RBP15.65■□□□□ 0.1
CBWD3-213ENST00000618217 RPL36ALQ969Q0 106 aaKnown RBP15.65■□□□□ 0.1
CBWD3-213ENST00000618217 NIT2Q9NQR4 276 aa15.65■□□□□ 0.1
CBWD3-213ENST00000618217 DNAJC30Q96LL9 226 aa15.65■□□□□ 0.1
CBWD3-213ENST00000618217 S100A6P06703 90 aa15.64■□□□□ 0.09
CBWD3-213ENST00000618217 LYPD5Q6UWN5 251 aa15.64■□□□□ 0.09
CBWD3-213ENST00000618217 ATP6V0E2Q8NHE4 81 aa15.64■□□□□ 0.09
CBWD3-213ENST00000618217 RPL39LQ96EH5 51 aaKnown RBP15.63■□□□□ 0.09
CBWD3-213ENST00000618217 LYSTQ99698 3801 aa15.63■□□□□ 0.09
CBWD3-213ENST00000618217 APCSP02743 223 aa15.62■□□□□ 0.09
CBWD3-213ENST00000618217 LGALS9CQ6DKI2 356 aa15.62■□□□□ 0.09
CBWD3-213ENST00000618217 LINC00588Q9Y4M8 146 aa15.62■□□□□ 0.09
CBWD3-213ENST00000618217 SMKR1H3BMG3 65 aa15.61■□□□□ 0.09
CBWD3-213ENST00000618217 TIRAPP58753 221 aa15.61■□□□□ 0.09
CBWD3-213ENST00000618217 TNFRSF18Q9Y5U5 241 aa15.61■□□□□ 0.09
CBWD3-213ENST00000618217 NCR2O95944 276 aa15.61■□□□□ 0.09
CBWD3-213ENST00000618217 NDUFA6P56556 154 aa15.61■□□□□ 0.09
CBWD3-213ENST00000618217 NRACQ8N912 160 aa15.61■□□□□ 0.09
CBWD3-213ENST00000618217 LINC00476Q8WZB0 136 aa15.61■□□□□ 0.09
CBWD3-213ENST00000618217 TRBV6-5A0A0K0K1A5 114 aa15.6■□□□□ 0.09
CBWD3-213ENST00000618217 CCL18P55774 89 aa15.6■□□□□ 0.09
CBWD3-213ENST00000618217 KIAA1644Q3SXP7 199 aa15.6■□□□□ 0.09
CBWD3-213ENST00000618217 GTSF1LQ9H1H1 148 aa15.6■□□□□ 0.09
CBWD3-213ENST00000618217 CKS2P33552 79 aa15.58■□□□□ 0.09
CBWD3-213ENST00000618217 LOC105371267A0A1B0GV96 52 aa15.57■□□□□ 0.08
CBWD3-213ENST00000618217 D6R8Y8 96 aa15.57■□□□□ 0.08
CBWD3-213ENST00000618217 SNRPEP62304 92 aaKnown RBP15.57■□□□□ 0.08
CBWD3-213ENST00000618217 OR10J3Q5JRS4 329 aa15.57■□□□□ 0.08
CBWD3-213ENST00000618217 MRPS16Q9Y3D3 137 aaKnown RBP15.57■□□□□ 0.08
CBWD3-213ENST00000618217 PPBPP02775 128 aa15.57■□□□□ 0.08
CBWD3-213ENST00000618217 DAZ4Q86SG3 579 aaKnown RBP15.57■□□□□ 0.08
CBWD3-213ENST00000618217 DAZ3Q9NR90 486 aaKnown RBP15.57■□□□□ 0.08
CBWD3-213ENST00000618217 IGHV3-38A0A0C4DH36 116 aa15.56■□□□□ 0.08
CBWD3-213ENST00000618217 PPP1R17O96001 155 aa15.55■□□□□ 0.08
CBWD3-213ENST00000618217 ORMDL3Q8N138 153 aa15.55■□□□□ 0.08
CBWD3-213ENST00000618217 UPK3BQ9BT76 320 aa15.55■□□□□ 0.08
CBWD3-213ENST00000618217 LCE6AA0A183 80 aa15.54■□□□□ 0.08
CBWD3-213ENST00000618217 SDHAF1A6NFY7 115 aa15.54■□□□□ 0.08
CBWD3-213ENST00000618217 LY6G6CO95867 125 aa15.54■□□□□ 0.08
CBWD3-213ENST00000618217 POLR2KP53803 58 aaKnown RBP15.54■□□□□ 0.08
CBWD3-213ENST00000618217 ST20Q9HBF5 79 aa15.54■□□□□ 0.08
CBWD3-213ENST00000618217 VPS13DQ5THJ4 4388 aa15.54■□□□□ 0.08
CBWD3-213ENST00000618217 ALMS1Q8TCU4 4167 aa15.54■□□□□ 0.08
CBWD3-213ENST00000618217 C5orf52A6NGY3 159 aa15.54■□□□□ 0.08
CBWD3-213ENST00000618217 NTM-AS1Q6ZSK4 140 aa15.54■□□□□ 0.08
CBWD3-213ENST00000618217 UBE2DNLQ8IWF7 75 aa15.54■□□□□ 0.08
CBWD3-213ENST00000618217 TMEM70Q9BUB7 260 aa15.54■□□□□ 0.08
CBWD3-213ENST00000618217 TNFRSF6BO95407 300 aa15.53■□□□□ 0.08
CBWD3-213ENST00000618217 NPYP01303 97 aa15.53■□□□□ 0.08
CBWD3-213ENST00000618217 LELP1Q5T871 98 aa15.53■□□□□ 0.08
CBWD3-213ENST00000618217 PRELID3AQ96N28 172 aa15.52■□□□□ 0.08
CBWD3-213ENST00000618217 DNAH1Q9P2D7 4330 aa15.52■□□□□ 0.07
CBWD3-213ENST00000618217 TRBV27A0A0K0K1C4 114 aa15.51■□□□□ 0.07
CBWD3-213ENST00000618217 SUMO2P61956 95 aaKnown RBP15.51■□□□□ 0.07
CBWD3-213ENST00000618217 C20orf78Q9BR46 151 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms