RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 NCR2O95944 276 aa8.09□□□□□ -1.11
SLIRP-212ENST00000613856 PPP1R17O96001 155 aa8.09□□□□□ -1.11
SLIRP-212ENST00000613856 IGHV3-53P01767 116 aa8.09□□□□□ -1.11
SLIRP-212ENST00000613856 OR10J3Q5JRS4 329 aa8.09□□□□□ -1.11
SLIRP-212ENST00000613856 NRACQ8N912 160 aa8.09□□□□□ -1.11
SLIRP-212ENST00000613856 ZNF479Q96JC4 524 aa8.09□□□□□ -1.11
SLIRP-212ENST00000613856 KMT2AQ03164 3969 aa8.09□□□□□ -1.11
SLIRP-212ENST00000613856 RYR1P21817 5038 aa8.08□□□□□ -1.12
SLIRP-212ENST00000613856 TRAV26-2A0A0B4J265 109 aa8.08□□□□□ -1.12
SLIRP-212ENST00000613856 F5H697 171 aa8.08□□□□□ -1.12
SLIRP-212ENST00000613856 SMKR1H3BMG3 65 aa8.08□□□□□ -1.12
SLIRP-212ENST00000613856 H7C1H1 209 aa8.08□□□□□ -1.12
SLIRP-212ENST00000613856 M0QY20 66 aa8.08□□□□□ -1.12
SLIRP-212ENST00000613856 DEFB130BP0DP73 79 aa8.08□□□□□ -1.12
SLIRP-212ENST00000613856 DEFB130AP0DP74 79 aa8.08□□□□□ -1.12
SLIRP-212ENST00000613856 DAD1P61803 113 aa8.08□□□□□ -1.12
SLIRP-212ENST00000613856 Q0VG73 95 aa8.08□□□□□ -1.12
SLIRP-212ENST00000613856 C18orf32Q8TCD1 76 aa8.08□□□□□ -1.12
SLIRP-212ENST00000613856 TRBV6-5A0A0K0K1A5 114 aa8.07□□□□□ -1.12
SLIRP-212ENST00000613856 GAS8-AS1O95177 125 aa8.07□□□□□ -1.12
SLIRP-212ENST00000613856 TNFRSF6BO95407 300 aa8.07□□□□□ -1.12
SLIRP-212ENST00000613856 NPYP01303 97 aa8.07□□□□□ -1.12
SLIRP-212ENST00000613856 GATA1P15976 413 aaPredicted RBP8.07□□□□□ -1.12
SLIRP-212ENST00000613856 COA6Q5JTJ3 125 aaKnown RBP8.07□□□□□ -1.12
SLIRP-212ENST00000613856 LINC00476Q8WZB0 136 aa8.07□□□□□ -1.12
SLIRP-212ENST00000613856 IGHV3-73A0A0B4J1V6 119 aa8.06□□□□□ -1.12
SLIRP-212ENST00000613856 A0A0J9YWU9 116 aa8.06□□□□□ -1.12
SLIRP-212ENST00000613856 TRBV10-1A0A0K0K1A3 114 aa8.06□□□□□ -1.12
SLIRP-212ENST00000613856 PRSS47A8MTI9 375 aa8.06□□□□□ -1.12
SLIRP-212ENST00000613856 RPL32P62910 135 aaKnown RBP8.06□□□□□ -1.12
SLIRP-212ENST00000613856 FHL2Q14192 279 aa8.06□□□□□ -1.12
SLIRP-212ENST00000613856 Q6ZSN1 163 aa8.06□□□□□ -1.12
SLIRP-212ENST00000613856 C20orf78Q9BR46 151 aa8.06□□□□□ -1.12
SLIRP-212ENST00000613856 TMA7Q9Y2S6 64 aaKnown RBP8.06□□□□□ -1.12
SLIRP-212ENST00000613856 TRBV6-4A0A1B0GX49 114 aa8.05□□□□□ -1.12
SLIRP-212ENST00000613856 K7EQD1 137 aa8.05□□□□□ -1.12
SLIRP-212ENST00000613856 ATP5G1P05496 136 aa8.05□□□□□ -1.12
SLIRP-212ENST00000613856 RPL39LQ96EH5 51 aaKnown RBP8.05□□□□□ -1.12
SLIRP-212ENST00000613856 DNAJC30Q96LL9 226 aa8.05□□□□□ -1.12
SLIRP-212ENST00000613856 MAP1LC3AQ9H492 121 aa8.05□□□□□ -1.12
SLIRP-212ENST00000613856 NIT2Q9NQR4 276 aa8.05□□□□□ -1.12
SLIRP-212ENST00000613856 TRGV4A0A0C4DH28 118 aa8.04□□□□□ -1.12
SLIRP-212ENST00000613856 LY6G6CO95867 125 aa8.04□□□□□ -1.12
SLIRP-212ENST00000613856 SUMO2P61956 95 aaKnown RBP8.04□□□□□ -1.12
SLIRP-212ENST00000613856 RHOHQ15669 191 aa8.04□□□□□ -1.12
SLIRP-212ENST00000613856 IQCJQ1A5X6 159 aa8.04□□□□□ -1.12
SLIRP-212ENST00000613856 C12orf74Q32Q52 190 aa8.04□□□□□ -1.12
SLIRP-212ENST00000613856 SMIM2Q9BVW6 85 aa8.04□□□□□ -1.12
SLIRP-212ENST00000613856 S100A6P06703 90 aa8.03□□□□□ -1.12
SLIRP-212ENST00000613856 PMCHP20382 165 aa8.03□□□□□ -1.12
SLIRP-212ENST00000613856 HOXA5P20719 270 aa8.03□□□□□ -1.12
SLIRP-212ENST00000613856 BAGE3Q86Y29 109 aa8.03□□□□□ -1.12
SLIRP-212ENST00000613856 SLC25A29Q8N8R3 303 aa8.03□□□□□ -1.12
SLIRP-212ENST00000613856 NEXN-AS1Q8NBZ9 246 aa8.03□□□□□ -1.12
SLIRP-212ENST00000613856 ST20Q9HBF5 79 aa8.03□□□□□ -1.12
SLIRP-212ENST00000613856 NXT2Q9NPJ8 142 aaKnown RBP8.03□□□□□ -1.12
SLIRP-212ENST00000613856 PRO0255Q9UI72 69 aa8.03□□□□□ -1.12
SLIRP-212ENST00000613856 DNAH10Q8IVF4 4471 aa8.02□□□□□ -1.13
SLIRP-212ENST00000613856 IGLV2-18A0A075B6J9 118 aa8.02□□□□□ -1.13
SLIRP-212ENST00000613856 TRBV27A0A0K0K1C4 114 aa8.02□□□□□ -1.13
SLIRP-212ENST00000613856 LINC01546A6NGU7 62 aa8.02□□□□□ -1.13
SLIRP-212ENST00000613856 P0DMU3 169 aa8.02□□□□□ -1.13
SLIRP-212ENST00000613856 FAM231AP0DMU4 169 aa8.02□□□□□ -1.13
SLIRP-212ENST00000613856 FAM231CP0DMU5 169 aa8.02□□□□□ -1.13
SLIRP-212ENST00000613856 ESDP10768 282 aa8.02□□□□□ -1.13
SLIRP-212ENST00000613856 CRYBA4P53673 196 aa8.02□□□□□ -1.13
SLIRP-212ENST00000613856 POLR2KP53803 58 aaKnown RBP8.02□□□□□ -1.13
SLIRP-212ENST00000613856 NDUFA6P56556 154 aa8.02□□□□□ -1.13
SLIRP-212ENST00000613856 LINC00310P59036 64 aa8.02□□□□□ -1.13
SLIRP-212ENST00000613856 Q8N8P6 123 aa8.02□□□□□ -1.13
SLIRP-212ENST00000613856 C11orf45Q8TAV5 145 aa8.02□□□□□ -1.13
SLIRP-212ENST00000613856 CHCHD1Q96BP2 118 aaKnown RBP8.02□□□□□ -1.13
SLIRP-212ENST00000613856 URB1-AS1Q96HZ7 61 aa8.02□□□□□ -1.13
SLIRP-212ENST00000613856 PRADC1Q9BSG0 188 aa8.02□□□□□ -1.13
SLIRP-212ENST00000613856 TMEM70Q9BUB7 260 aa8.02□□□□□ -1.13
SLIRP-212ENST00000613856 HHLA3Q9XRX5 114 aa8.02□□□□□ -1.13
SLIRP-212ENST00000613856 HECTD4Q9Y4D8 3996 aa8.01□□□□□ -1.13
SLIRP-212ENST00000613856 SDHAF1A6NFY7 115 aa8.01□□□□□ -1.13
SLIRP-212ENST00000613856 K7EMI3 77 aa8.01□□□□□ -1.13
SLIRP-212ENST00000613856 SERF1AO75920 110 aa8.01□□□□□ -1.13
SLIRP-212ENST00000613856 LINC00694P0DN24 101 aa8.01□□□□□ -1.13
SLIRP-212ENST00000613856 IFI27P40305 119 aaPredicted RBP8.01□□□□□ -1.13
SLIRP-212ENST00000613856 RPL36AP83881 106 aaKnown RBP8.01□□□□□ -1.13
SLIRP-212ENST00000613856 FA2HQ7L5A8 372 aa8.01□□□□□ -1.13
SLIRP-212ENST00000613856 PRSS3P2Q8NHM4 247 aa8.01□□□□□ -1.13
SLIRP-212ENST00000613856 RPL36ALQ969Q0 106 aaKnown RBP8.01□□□□□ -1.13
SLIRP-212ENST00000613856 TNFRSF18Q9Y5U5 241 aa8.01□□□□□ -1.13
SLIRP-212ENST00000613856 TRBV7-3A0A075B6L6 115 aa8□□□□□ -1.13
SLIRP-212ENST00000613856 LOC389332A0A1B0GUA5 103 aa8□□□□□ -1.13
SLIRP-212ENST00000613856 C5orf52A6NGY3 159 aa8□□□□□ -1.13
SLIRP-212ENST00000613856 VCYO14598 125 aa8□□□□□ -1.13
SLIRP-212ENST00000613856 LINC00614P0C842 121 aa8□□□□□ -1.13
SLIRP-212ENST00000613856 RNASEKQ6P5S7 137 aaKnown RBP8□□□□□ -1.13
SLIRP-212ENST00000613856 Q6ZTC4 211 aa8□□□□□ -1.13
SLIRP-212ENST00000613856 NIT1Q86X76 327 aa8□□□□□ -1.13
SLIRP-212ENST00000613856 AP5S1Q9NUS5 200 aa8□□□□□ -1.13
SLIRP-212ENST00000613856 F5H768 121 aa7.99□□□□□ -1.13
SLIRP-212ENST00000613856 TCAPO15273 167 aa7.99□□□□□ -1.13
SLIRP-212ENST00000613856 NANOS2P60321 138 aaKnown RBP7.99□□□□□ -1.13
SLIRP-212ENST00000613856 UBE2D3P61077 147 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 808.2 ms