RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 TTC32Q5I0X7 151 aa16.52■□□□□ 0.24
POLR2J3-220ENST00000613744 NSD1Q96L73 2696 aaPredicted RBP16.52■□□□□ 0.24
POLR2J3-220ENST00000613744 MED14OSP0DP75 135 aa16.52■□□□□ 0.23
POLR2J3-220ENST00000613744 FN1P02751 2386 aaKnown RBP16.52■□□□□ 0.23
POLR2J3-220ENST00000613744 TRAV8-2A0A0B4J237 113 aa16.51■□□□□ 0.23
POLR2J3-220ENST00000613744 C9orf139Q6ZV77 190 aa16.51■□□□□ 0.23
POLR2J3-220ENST00000613744 DUX5Q96PT3 197 aa16.51■□□□□ 0.23
POLR2J3-220ENST00000613744 IGLV4-69A0A075B6H9 119 aa16.5■□□□□ 0.23
POLR2J3-220ENST00000613744 C11orf86A6NJI1 115 aa16.5■□□□□ 0.23
POLR2J3-220ENST00000613744 RPL13AP40429 203 aaKnown RBP16.5■□□□□ 0.23
POLR2J3-220ENST00000613744 MRPL23Q16540 153 aaKnown RBP16.5■□□□□ 0.23
POLR2J3-220ENST00000613744 KLHL30-AS1Q8NEE0 82 aa16.5■□□□□ 0.23
POLR2J3-220ENST00000613744 A0A0B4J2C4 111 aa16.5■□□□□ 0.23
POLR2J3-220ENST00000613744 LY6EQ16553 131 aa16.5■□□□□ 0.23
POLR2J3-220ENST00000613744 ZFAND3Q9H8U3 227 aa16.5■□□□□ 0.23
POLR2J3-220ENST00000613744 H3BUX3 64 aa16.49■□□□□ 0.23
POLR2J3-220ENST00000613744 IGHV4-59P01825 116 aa16.49■□□□□ 0.23
POLR2J3-220ENST00000613744 CRYGDP07320 174 aa16.49■□□□□ 0.23
POLR2J3-220ENST00000613744 KLK9Q2XQG4 91 aa16.49■□□□□ 0.23
POLR2J3-220ENST00000613744 RNF182Q8N6D2 247 aa16.49■□□□□ 0.23
POLR2J3-220ENST00000613744 TMEM141Q96I45 108 aa16.49■□□□□ 0.23
POLR2J3-220ENST00000613744 KLK9Q9UKQ9 250 aa16.49■□□□□ 0.23
POLR2J3-220ENST00000613744 C9JAW5 83 aa16.49■□□□□ 0.23
POLR2J3-220ENST00000613744 PMVKQ15126 192 aa16.48■□□□□ 0.23
POLR2J3-220ENST00000613744 TMEM219Q86XT9 240 aa16.48■□□□□ 0.23
POLR2J3-220ENST00000613744 POM121L12Q8N7R1 296 aa16.48■□□□□ 0.23
POLR2J3-220ENST00000613744 CLEC3BP05452 202 aa16.47■□□□□ 0.23
POLR2J3-220ENST00000613744 IGHV3-23P01764 117 aa16.47■□□□□ 0.23
POLR2J3-220ENST00000613744 IGHV3-33P01772 117 aa16.46■□□□□ 0.23
POLR2J3-220ENST00000613744 ATXN8Q156A1 80 aa16.46■□□□□ 0.23
POLR2J3-220ENST00000613744 TMEM95Q3KNT9 176 aa16.46■□□□□ 0.23
POLR2J3-220ENST00000613744 Q6YL49 198 aa16.46■□□□□ 0.23
POLR2J3-220ENST00000613744 EBI3Q14213 229 aa16.46■□□□□ 0.22
POLR2J3-220ENST00000613744 NIPBLQ6KC79 2804 aaeCLIP16.45■□□□□ 0.22
POLR2J3-220ENST00000613744 TRAV4A0A0B4J268 109 aa16.45■□□□□ 0.22
POLR2J3-220ENST00000613744 CRLF1O75462 422 aa16.45■□□□□ 0.22
POLR2J3-220ENST00000613744 NDPQ00604 133 aa16.45■□□□□ 0.22
POLR2J3-220ENST00000613744 Q8N1Y9 231 aa16.45■□□□□ 0.22
POLR2J3-220ENST00000613744 Q8N6K4 173 aa16.45■□□□□ 0.22
POLR2J3-220ENST00000613744 RPL39LQ96EH5 51 aaKnown RBP16.45■□□□□ 0.22
POLR2J3-220ENST00000613744 TIMM17AQ99595 171 aa16.45■□□□□ 0.22
POLR2J3-220ENST00000613744 IGIPA6NJ69 53 aa16.44■□□□□ 0.22
POLR2J3-220ENST00000613744 OR10J6PQ8NGY7 276 aa16.44■□□□□ 0.22
POLR2J3-220ENST00000613744 TMEM263Q8WUH6 116 aaKnown RBP16.44■□□□□ 0.22
POLR2J3-220ENST00000613744 Q6ZS46 218 aa16.44■□□□□ 0.22
POLR2J3-220ENST00000613744 AMELXQ99217 191 aa16.44■□□□□ 0.22
POLR2J3-220ENST00000613744 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.43■□□□□ 0.22
POLR2J3-220ENST00000613744 TRAV8-4A0A0B4J246 113 aa16.43■□□□□ 0.22
POLR2J3-220ENST00000613744 CCDC179H3BU77 68 aa16.42■□□□□ 0.22
POLR2J3-220ENST00000613744 DUSP14O95147 198 aaKnown RBP16.42■□□□□ 0.22
POLR2J3-220ENST00000613744 TRAV21A0A0B4J279 112 aa16.42■□□□□ 0.22
POLR2J3-220ENST00000613744 TSHBP01222 138 aa16.42■□□□□ 0.22
POLR2J3-220ENST00000613744 LINC01620Q4KN68 170 aa16.42■□□□□ 0.22
POLR2J3-220ENST00000613744 ESM1Q9NQ30 184 aa16.42■□□□□ 0.22
POLR2J3-220ENST00000613744 IGHV4OR15-8A0A075B7B6 117 aa16.41■□□□□ 0.22
POLR2J3-220ENST00000613744 A0A087WW49 117 aa16.41■□□□□ 0.22
POLR2J3-220ENST00000613744 CLPSL1A2RUU4 121 aa16.41■□□□□ 0.22
POLR2J3-220ENST00000613744 J3QQQ9 107 aa16.41■□□□□ 0.22
POLR2J3-220ENST00000613744 LGALS3P17931 250 aaKnown RBP16.41■□□□□ 0.22
POLR2J3-220ENST00000613744 GPHB5Q86YW7 130 aa16.41■□□□□ 0.22
POLR2J3-220ENST00000613744 FAM110DQ8TAY7 271 aaPredicted RBP16.41■□□□□ 0.22
POLR2J3-220ENST00000613744 NTN5Q8WTR8 489 aaPredicted RBP16.41■□□□□ 0.22
POLR2J3-220ENST00000613744 TRBV10-2A0A0K0K1G8 114 aa16.41■□□□□ 0.22
POLR2J3-220ENST00000613744 Q8N9W7 124 aa16.41■□□□□ 0.22
POLR2J3-220ENST00000613744 LINC00477Q96M19 166 aa16.41■□□□□ 0.22
POLR2J3-220ENST00000613744 ODF3Q96PU9 254 aa16.41■□□□□ 0.22
POLR2J3-220ENST00000613744 A4D1N5 150 aa16.4■□□□□ 0.22
POLR2J3-220ENST00000613744 TSPEAR-AS2P59090 65 aa16.4■□□□□ 0.22
POLR2J3-220ENST00000613744 PHLDA3Q9Y5J5 127 aa16.4■□□□□ 0.22
POLR2J3-220ENST00000613744 DNAJC9-AS1A6NH13 148 aa16.39■□□□□ 0.21
POLR2J3-220ENST00000613744 HERV-K104P63124 156 aa16.39■□□□□ 0.21
POLR2J3-220ENST00000613744 ZNF876PQ49A33 203 aa16.39■□□□□ 0.21
POLR2J3-220ENST00000613744 C14orf178Q8N769 122 aaPredicted RBP16.39■□□□□ 0.21
POLR2J3-220ENST00000613744 MDFICQ9P1T7 246 aa16.39■□□□□ 0.21
POLR2J3-220ENST00000613744 TP53TG1Q9Y2A0 90 aa16.39■□□□□ 0.21
POLR2J3-220ENST00000613744 U3KQE9 123 aa16.39■□□□□ 0.21
POLR2J3-220ENST00000613744 A6NDX4 124 aa16.39■□□□□ 0.21
POLR2J3-220ENST00000613744 S100A4P26447 101 aaKnown RBP16.39■□□□□ 0.21
POLR2J3-220ENST00000613744 CRIP2P52943 208 aaPredicted RBP16.39■□□□□ 0.21
POLR2J3-220ENST00000613744 METTL26Q96S19 204 aa16.39■□□□□ 0.21
POLR2J3-220ENST00000613744 TRBV30A0A0K0K1B3 111 aa16.38■□□□□ 0.21
POLR2J3-220ENST00000613744 LEPROTO15243 131 aa16.38■□□□□ 0.21
POLR2J3-220ENST00000613744 SHISA2Q6UWI4 295 aa16.38■□□□□ 0.21
POLR2J3-220ENST00000613744 TRPT1Q86TN4 253 aaKnown RBP16.38■□□□□ 0.21
POLR2J3-220ENST00000613744 A0A0J9YX75 114 aa16.38■□□□□ 0.21
POLR2J3-220ENST00000613744 NXPH4O95158 308 aa16.38■□□□□ 0.21
POLR2J3-220ENST00000613744 MGPP08493 103 aa16.38■□□□□ 0.21
POLR2J3-220ENST00000613744 C15orf53Q8NAA6 179 aa16.38■□□□□ 0.21
POLR2J3-220ENST00000613744 VPREB3Q9UKI3 123 aa16.38■□□□□ 0.21
POLR2J3-220ENST00000613744 MOB4Q9Y3A3 225 aa16.38■□□□□ 0.21
POLR2J3-220ENST00000613744 NF1P21359 2839 aa16.37■□□□□ 0.21
POLR2J3-220ENST00000613744 FAM240AA0A1B0GVK7 77 aa16.37■□□□□ 0.21
POLR2J3-220ENST00000613744 TMEM170BQ5T4T1 132 aa16.37■□□□□ 0.21
POLR2J3-220ENST00000613744 PRR9Q5T870 116 aa16.37■□□□□ 0.21
POLR2J3-220ENST00000613744 H3BMM0 161 aa16.36■□□□□ 0.21
POLR2J3-220ENST00000613744 LGALS9O00182 355 aa16.36■□□□□ 0.21
POLR2J3-220ENST00000613744 C15orf32Q32M92 178 aa16.36■□□□□ 0.21
POLR2J3-220ENST00000613744 SMIM20Q8N5G0 67 aa16.36■□□□□ 0.21
POLR2J3-220ENST00000613744 C5orf56Q8N8D9 126 aa16.36■□□□□ 0.21
POLR2J3-220ENST00000613744 UBE2WQ96B02 151 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms