RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 PLP1P60201 277 aa3.6□□□□□ -1.83
SYCP1-209ENST00000613524 BVES-AS1Q5T3Y7 98 aa3.6□□□□□ -1.83
SYCP1-209ENST00000613524 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.6□□□□□ -1.83
SYCP1-209ENST00000613524 BPIFA4PQ86YQ2 179 aa3.6□□□□□ -1.83
SYCP1-209ENST00000613524 C5orf17Q8NAS9 161 aa3.6□□□□□ -1.83
SYCP1-209ENST00000613524 LINC01587Q99440 93 aa3.6□□□□□ -1.83
SYCP1-209ENST00000613524 OVOL2Q9BRP0 275 aa3.6□□□□□ -1.83
SYCP1-209ENST00000613524 NDFIP1Q9BT67 221 aa3.6□□□□□ -1.83
SYCP1-209ENST00000613524 Q9H3A6 140 aa3.6□□□□□ -1.83
SYCP1-209ENST00000613524 SCRT2Q9NQ03 307 aa3.6□□□□□ -1.83
SYCP1-209ENST00000613524 STARD9Q9P2P6 4700 aa3.59□□□□□ -1.83
SYCP1-209ENST00000613524 P01737 135 aa3.59□□□□□ -1.83
SYCP1-209ENST00000613524 RPL7P18124 248 aaKnown RBP3.59□□□□□ -1.83
SYCP1-209ENST00000613524 RNASE4P34096 147 aaKnown RBP3.59□□□□□ -1.83
SYCP1-209ENST00000613524 Q86TA4 180 aa3.59□□□□□ -1.83
SYCP1-209ENST00000613524 SHANK2-AS3Q9BTD1 123 aa3.59□□□□□ -1.83
SYCP1-209ENST00000613524 A0A096LPF7 62 aa3.59□□□□□ -1.84
SYCP1-209ENST00000613524 IGHV4-28A0A0C4DH34 117 aa3.59□□□□□ -1.84
SYCP1-209ENST00000613524 FAM231BA6NCW3 169 aa3.59□□□□□ -1.84
SYCP1-209ENST00000613524 LEPROTL1O95214 131 aa3.59□□□□□ -1.84
SYCP1-209ENST00000613524 FAM162BQ5T6X4 162 aa3.59□□□□□ -1.84
SYCP1-209ENST00000613524 GATD1Q8NB37 220 aa3.59□□□□□ -1.84
SYCP1-209ENST00000613524 MUC7Q8TAX7 377 aa3.59□□□□□ -1.84
SYCP1-209ENST00000613524 FAM218AQ96MZ4 157 aa3.59□□□□□ -1.84
SYCP1-209ENST00000613524 CELA1Q9UNI1 258 aa3.59□□□□□ -1.84
SYCP1-209ENST00000613524 TMSB15BA0A087X1C1 80 aa3.58□□□□□ -1.84
SYCP1-209ENST00000613524 H3BRN7 92 aa3.58□□□□□ -1.84
SYCP1-209ENST00000613524 M0R2N4 97 aa3.58□□□□□ -1.84
SYCP1-209ENST00000613524 NUDT3O95989 172 aa3.58□□□□□ -1.84
SYCP1-209ENST00000613524 LINC01545Q5VT33 79 aa3.58□□□□□ -1.84
SYCP1-209ENST00000613524 LINC00476Q8WZB0 136 aa3.58□□□□□ -1.84
SYCP1-209ENST00000613524 KRTAP4-11Q9BYQ6 195 aa3.58□□□□□ -1.84
SYCP1-209ENST00000613524 OTORQ9NRC9 128 aa3.58□□□□□ -1.84
SYCP1-209ENST00000613524 TRAV8-2A0A0B4J237 113 aa3.58□□□□□ -1.84
SYCP1-209ENST00000613524 MUC21A0A0G2JKD1 596 aa3.58□□□□□ -1.84
SYCP1-209ENST00000613524 TRBV6-1A0A0K0K1D8 114 aa3.58□□□□□ -1.84
SYCP1-209ENST00000613524 MUC21A0A140T8X8 626 aa3.58□□□□□ -1.84
SYCP1-209ENST00000613524 H3BMM0 161 aa3.58□□□□□ -1.84
SYCP1-209ENST00000613524 OR5AL1P0C617 328 aa3.58□□□□□ -1.84
SYCP1-209ENST00000613524 CRIP1P50238 77 aa3.58□□□□□ -1.84
SYCP1-209ENST00000613524 SEC61BP60468 96 aaKnown RBP3.58□□□□□ -1.84
SYCP1-209ENST00000613524 SLC25A34Q6PIV7 304 aa3.58□□□□□ -1.84
SYCP1-209ENST00000613524 Q6ZTC4 211 aa3.58□□□□□ -1.84
SYCP1-209ENST00000613524 C2orf91Q6ZV80 131 aa3.58□□□□□ -1.84
SYCP1-209ENST00000613524 GOLT1AQ6ZVE7 132 aa3.58□□□□□ -1.84
SYCP1-209ENST00000613524 OR10J6PQ8NGY7 276 aa3.58□□□□□ -1.84
SYCP1-209ENST00000613524 VGLL1Q99990 258 aa3.58□□□□□ -1.84
SYCP1-209ENST00000613524 TMEM14CQ9P0S9 112 aa3.58□□□□□ -1.84
SYCP1-209ENST00000613524 IGLV2-18A0A075B6J9 118 aa3.57□□□□□ -1.84
SYCP1-209ENST00000613524 A0A096LNJ9 63 aa3.57□□□□□ -1.84
SYCP1-209ENST00000613524 A0A0J9YY99 117 aa3.57□□□□□ -1.84
SYCP1-209ENST00000613524 NCR2O95944 276 aa3.57□□□□□ -1.84
SYCP1-209ENST00000613524 AZU1P20160 251 aa3.57□□□□□ -1.84
SYCP1-209ENST00000613524 COX8CQ7Z4L0 72 aa3.57□□□□□ -1.84
SYCP1-209ENST00000613524 C11orf45Q8TAV5 145 aa3.57□□□□□ -1.84
SYCP1-209ENST00000613524 ZC2HC1AQ96GY0 325 aa3.57□□□□□ -1.84
SYCP1-209ENST00000613524 TRAV25A0A0B4J276 109 aa3.57□□□□□ -1.84
SYCP1-209ENST00000613524 ARMS2P0C7Q2 107 aa3.57□□□□□ -1.84
SYCP1-209ENST00000613524 RPS20P60866 119 aaKnown RBP3.57□□□□□ -1.84
SYCP1-209ENST00000613524 PRNTQ86SH4 94 aa3.57□□□□□ -1.84
SYCP1-209ENST00000613524 TMEM75Q8N9X5 138 aa3.57□□□□□ -1.84
SYCP1-209ENST00000613524 OR4C5Q8NGB2 326 aa3.57□□□□□ -1.84
SYCP1-209ENST00000613524 OR8A1Q8NGG7 326 aa3.57□□□□□ -1.84
SYCP1-209ENST00000613524 DEFB104AQ8WTQ1 72 aa3.57□□□□□ -1.84
SYCP1-209ENST00000613524 PMCHL2Q9BQD1 86 aa3.57□□□□□ -1.84
SYCP1-209ENST00000613524 MAP1LC3CQ9BXW4 147 aa3.57□□□□□ -1.84
SYCP1-209ENST00000613524 TMEM191AQ9H0A3 160 aa3.57□□□□□ -1.84
SYCP1-209ENST00000613524 IGHV3-73A0A0B4J1V6 119 aa3.57□□□□□ -1.84
SYCP1-209ENST00000613524 MRPS12O15235 138 aaKnown RBP3.57□□□□□ -1.84
SYCP1-209ENST00000613524 FGF6P10767 208 aa3.57□□□□□ -1.84
SYCP1-209ENST00000613524 PSG9Q00887 426 aa3.57□□□□□ -1.84
SYCP1-209ENST00000613524 VAMP3Q15836 100 aa3.57□□□□□ -1.84
SYCP1-209ENST00000613524 TM2D3Q9BRN9 247 aa3.57□□□□□ -1.84
SYCP1-209ENST00000613524 NOP10Q9NPE3 64 aaKnown RBP3.57□□□□□ -1.84
SYCP1-209ENST00000613524 CSDC2Q9Y534 153 aaKnown RBP3.57□□□□□ -1.84
SYCP1-209ENST00000613524 RYR3Q15413 4870 aa3.57□□□□□ -1.84
SYCP1-209ENST00000613524 TRBV19A0A075B6N1 114 aa3.56□□□□□ -1.84
SYCP1-209ENST00000613524 TRAV26-1A0A087WT03 109 aa3.56□□□□□ -1.84
SYCP1-209ENST00000613524 TRAV8-6A0A0B4J262 113 aa3.56□□□□□ -1.84
SYCP1-209ENST00000613524 GAGE7O76087 117 aa3.56□□□□□ -1.84
SYCP1-209ENST00000613524 PPBPP02775 128 aa3.56□□□□□ -1.84
SYCP1-209ENST00000613524 GIG44P09565 113 aaPredicted RBP3.56□□□□□ -1.84
SYCP1-209ENST00000613524 GAGE12FP0CL80 117 aa3.56□□□□□ -1.84
SYCP1-209ENST00000613524 GAGE12GP0CL81 117 aa3.56□□□□□ -1.84
SYCP1-209ENST00000613524 GAGE12IP0CL82 117 aa3.56□□□□□ -1.84
SYCP1-209ENST00000613524 RBMY1A1P0DJD3 496 aaKnown RBP3.56□□□□□ -1.84
SYCP1-209ENST00000613524 RBMY1CP0DJD4 496 aa3.56□□□□□ -1.84
SYCP1-209ENST00000613524 COX8AP10176 69 aa3.56□□□□□ -1.84
SYCP1-209ENST00000613524 RBMY1FQ15415 496 aaKnown RBP3.56□□□□□ -1.84
SYCP1-209ENST00000613524 PSG3Q16557 428 aa3.56□□□□□ -1.84
SYCP1-209ENST00000613524 RRN3P1Q2M238 152 aa3.56□□□□□ -1.84
SYCP1-209ENST00000613524 SAPCD1Q5SSQ6 148 aa3.56□□□□□ -1.84
SYCP1-209ENST00000613524 CASC10Q5T4H9 136 aa3.56□□□□□ -1.84
SYCP1-209ENST00000613524 FAM222AQ5U5X8 452 aa3.56□□□□□ -1.84
SYCP1-209ENST00000613524 AMMECR1LQ6DCA0 310 aa3.56□□□□□ -1.84
SYCP1-209ENST00000613524 PHLDA1Q8WV24 401 aaPredicted RBP3.56□□□□□ -1.84
SYCP1-209ENST00000613524 KRTAP3-1Q9BYR8 98 aa3.56□□□□□ -1.84
SYCP1-209ENST00000613524 HSPB8Q9UJY1 196 aa3.56□□□□□ -1.84
SYCP1-209ENST00000613524 A0A0J9YX75 114 aa3.56□□□□□ -1.84
SYCP1-209ENST00000613524 A0A1B0GUT8 65 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms