RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 MBD3L4A6NDZ8 208 aaPredicted RBP6.81□□□□□ -1.32
TTC28-208ENST00000612946 MBD3L3A6NE82 208 aaPredicted RBP6.81□□□□□ -1.32
TTC28-208ENST00000612946 MBD3L5A6NJ08 208 aaPredicted RBP6.81□□□□□ -1.32
TTC28-208ENST00000612946 MBD3L2Q8NHZ7 208 aaPredicted RBP6.81□□□□□ -1.32
TTC28-208ENST00000612946 TRIAP1O43715 76 aa6.81□□□□□ -1.32
TTC28-208ENST00000612946 ZNRF2Q8NHG8 242 aa6.81□□□□□ -1.32
TTC28-208ENST00000612946 K7ENP7 123 aa6.81□□□□□ -1.32
TTC28-208ENST00000612946 A0A1W2PRX2 142 aa6.81□□□□□ -1.32
TTC28-208ENST00000612946 K7EQD1 137 aa6.81□□□□□ -1.32
TTC28-208ENST00000612946 IGHV3-30P01768 117 aa6.81□□□□□ -1.32
TTC28-208ENST00000612946 IGHV3-30-5P0DP03 117 aa6.81□□□□□ -1.32
TTC28-208ENST00000612946 ZNF581Q9P0T4 197 aa6.81□□□□□ -1.32
TTC28-208ENST00000612946 RSPO4Q2I0M5 234 aaPredicted RBP6.81□□□□□ -1.32
TTC28-208ENST00000612946 NPBQ8NG41 125 aa6.81□□□□□ -1.32
TTC28-208ENST00000612946 WISP1O95388 367 aa6.81□□□□□ -1.32
TTC28-208ENST00000612946 RNF114Q9Y508 228 aa6.81□□□□□ -1.32
TTC28-208ENST00000612946 RNF144BQ7Z419 303 aa6.81□□□□□ -1.32
TTC28-208ENST00000612946 P0C879 139 aa6.81□□□□□ -1.32
TTC28-208ENST00000612946 RPL39LQ96EH5 51 aaKnown RBP6.81□□□□□ -1.32
TTC28-208ENST00000612946 ZNF672Q499Z4 452 aaPredicted RBP6.81□□□□□ -1.32
TTC28-208ENST00000612946 MIFP14174 115 aa6.8□□□□□ -1.32
TTC28-208ENST00000612946 A0A0J9YY99 117 aa6.8□□□□□ -1.32
TTC28-208ENST00000612946 HRCT1Q6UXD1 115 aa6.8□□□□□ -1.32
TTC28-208ENST00000612946 TRBV10-1A0A0K0K1A3 114 aa6.8□□□□□ -1.32
TTC28-208ENST00000612946 COX7BP24311 80 aa6.8□□□□□ -1.32
TTC28-208ENST00000612946 FAM27E3Q08E93 113 aa6.8□□□□□ -1.32
TTC28-208ENST00000612946 TRBV7-7A0A0K0K1E9 115 aa6.8□□□□□ -1.32
TTC28-208ENST00000612946 B4DSR2 109 aa6.8□□□□□ -1.32
TTC28-208ENST00000612946 APOC4P55056 127 aa6.8□□□□□ -1.32
TTC28-208ENST00000612946 SPINK13Q1W4C9 94 aa6.8□□□□□ -1.32
TTC28-208ENST00000612946 PIK3CD-AS1Q5SR53 167 aa6.8□□□□□ -1.32
TTC28-208ENST00000612946 C20orf203Q8NBC4 194 aa6.8□□□□□ -1.32
TTC28-208ENST00000612946 C16orf74Q96GX8 76 aa6.8□□□□□ -1.32
TTC28-208ENST00000612946 PATE3B3GLJ2 98 aa6.8□□□□□ -1.32
TTC28-208ENST00000612946 Q6ZR03 302 aa6.8□□□□□ -1.32
TTC28-208ENST00000612946 A0A0J9YXV3 536 aa6.79□□□□□ -1.32
TTC28-208ENST00000612946 LOC107984640A0A0U1RRK4 108 aa6.79□□□□□ -1.32
TTC28-208ENST00000612946 ENHOQ6UWT2 76 aa6.79□□□□□ -1.32
TTC28-208ENST00000612946 CLPSL1A2RUU4 121 aa6.79□□□□□ -1.32
TTC28-208ENST00000612946 OVOL3O00110 214 aa6.79□□□□□ -1.32
TTC28-208ENST00000612946 IBA57-AS1B1ANH7 110 aa6.79□□□□□ -1.32
TTC28-208ENST00000612946 ATP6V0E1O15342 81 aa6.79□□□□□ -1.32
TTC28-208ENST00000612946 GNLYP22749 145 aa6.79□□□□□ -1.32
TTC28-208ENST00000612946 USP9XQ93008 2570 aaPredicted RBP6.79□□□□□ -1.32
TTC28-208ENST00000612946 WFDC11Q8NEX6 87 aa6.79□□□□□ -1.32
TTC28-208ENST00000612946 C5orf38Q86SI9 138 aa6.79□□□□□ -1.32
TTC28-208ENST00000612946 CASC2Q6XLA1 102 aa6.78□□□□□ -1.32
TTC28-208ENST00000612946 MRPS12O15235 138 aaKnown RBP6.78□□□□□ -1.32
TTC28-208ENST00000612946 MLANAQ16655 118 aa6.78□□□□□ -1.32
TTC28-208ENST00000612946 MDS2Q8NDY4 140 aa6.78□□□□□ -1.32
TTC28-208ENST00000612946 PSCAO43653 123 aa6.78□□□□□ -1.32
TTC28-208ENST00000612946 KLK9Q9UKQ9 250 aa6.78□□□□□ -1.32
TTC28-208ENST00000612946 BCE1O60756 84 aa6.78□□□□□ -1.32
TTC28-208ENST00000612946 I3L2K1 104 aa6.78□□□□□ -1.32
TTC28-208ENST00000612946 IGKV1-17P01599 117 aa6.77□□□□□ -1.32
TTC28-208ENST00000612946 UBE2D3P61077 147 aa6.77□□□□□ -1.32
TTC28-208ENST00000612946 UBE2D2P62837 147 aa6.77□□□□□ -1.32
TTC28-208ENST00000612946 NAV2Q8IVL1 2488 aa6.77□□□□□ -1.33
TTC28-208ENST00000612946 TIRAPP58753 221 aa6.77□□□□□ -1.33
TTC28-208ENST00000612946 SAA4P35542 130 aa6.77□□□□□ -1.33
TTC28-208ENST00000612946 TMEM223A0PJW6 202 aa6.77□□□□□ -1.33
TTC28-208ENST00000612946 ZNF524Q96C55 264 aa6.77□□□□□ -1.33
TTC28-208ENST00000612946 MTORP42345 2549 aa6.77□□□□□ -1.33
TTC28-208ENST00000612946 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.77□□□□□ -1.33
TTC28-208ENST00000612946 RETNQ9HD89 108 aa6.77□□□□□ -1.33
TTC28-208ENST00000612946 NFE4Q86UQ8 179 aa6.77□□□□□ -1.33
TTC28-208ENST00000612946 IGFL4Q6B9Z1 124 aa6.77□□□□□ -1.33
TTC28-208ENST00000612946 IGLV1-44P01699 117 aa6.76□□□□□ -1.33
TTC28-208ENST00000612946 SPTBN4Q9H254 2564 aa6.76□□□□□ -1.33
TTC28-208ENST00000612946 IGLV2-8P01709 118 aa6.76□□□□□ -1.33
TTC28-208ENST00000612946 JMJD1CQ15652 2540 aa6.76□□□□□ -1.33
TTC28-208ENST00000612946 PYGO1Q9Y3Y4 419 aa6.76□□□□□ -1.33
TTC28-208ENST00000612946 LINC01560Q8TB33 94 aa6.76□□□□□ -1.33
TTC28-208ENST00000612946 IGLV3-9A0A075B6K5 115 aa6.76□□□□□ -1.33
TTC28-208ENST00000612946 ANGP03950 147 aaKnown RBP6.76□□□□□ -1.33
TTC28-208ENST00000612946 DEFB131AP59861 70 aa6.76□□□□□ -1.33
TTC28-208ENST00000612946 IGLV11-55A0A075B6I3 123 aa6.76□□□□□ -1.33
TTC28-208ENST00000612946 K7EIM0 57 aa6.76□□□□□ -1.33
TTC28-208ENST00000612946 XCL1P47992 114 aa6.76□□□□□ -1.33
TTC28-208ENST00000612946 UBE2E2Q96LR5 201 aa6.76□□□□□ -1.33
TTC28-208ENST00000612946 TP53TG3Q9ULZ0 132 aa6.75□□□□□ -1.33
TTC28-208ENST00000612946 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.75□□□□□ -1.33
TTC28-208ENST00000612946 IGKV2-29A2NJV5 120 aaPredicted RBP6.75□□□□□ -1.33
TTC28-208ENST00000612946 H3BUX3 64 aa6.75□□□□□ -1.33
TTC28-208ENST00000612946 ASPHD1Q5U4P2 390 aa6.75□□□□□ -1.33
TTC28-208ENST00000612946 ANKRD11Q6UB99 2663 aaPredicted RBP6.75□□□□□ -1.33
TTC28-208ENST00000612946 J3QLI3 93 aa6.75□□□□□ -1.33
TTC28-208ENST00000612946 IGHV3-53P01767 116 aa6.75□□□□□ -1.33
TTC28-208ENST00000612946 CXCL6P80162 114 aa6.75□□□□□ -1.33
TTC28-208ENST00000612946 WDR86Q86TI4 376 aa6.75□□□□□ -1.33
TTC28-208ENST00000612946 CNFNQ9BYD5 112 aa6.75□□□□□ -1.33
TTC28-208ENST00000612946 LINC00308Q8TCZ7 52 aa6.75□□□□□ -1.33
TTC28-208ENST00000612946 TMEM263Q8WUH6 116 aaKnown RBP6.75□□□□□ -1.33
TTC28-208ENST00000612946 LHBP01229 141 aa6.74□□□□□ -1.33
TTC28-208ENST00000612946 LIMD2Q9BT23 127 aa6.74□□□□□ -1.33
TTC28-208ENST00000612946 CRYGAP11844 174 aa6.74□□□□□ -1.33
TTC28-208ENST00000612946 K7EMT4 169 aa6.74□□□□□ -1.33
TTC28-208ENST00000612946 TFF1P04155 84 aa6.74□□□□□ -1.33
TTC28-208ENST00000612946 TRBV10-3A0A0K0K1G6 114 aa6.74□□□□□ -1.33
TTC28-208ENST00000612946 COX17Q14061 63 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 169.3 ms